Array 1 17157-17697 **** Predicted by CRISPRDetect 2.4 *** >NZ_VVZZ01000105.1 Bacteroides faecis strain BIOML-A1 scaffold105_size17701, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 17157 29 100.0 35 ............................. TGATATCGCCAAAGGCGCACACCACGATCTTTGAT 17221 29 100.0 35 ............................. TGACATATCAACAGTCTTCAGATCAACAATCGGGG 17285 29 100.0 35 ............................. TTCTTTTTGCGTAGTTCGCTCCTAGACCCTTGCTA 17349 29 100.0 38 ............................. TAGTTCGACTGCCTTTTTTGCATTAGCTGCCGCTTCTG 17416 29 100.0 34 ............................. ATGATAGATTACTCACAAGGTAATGACTTCGACC 17479 29 100.0 35 ............................. TCAAGCGTAACAGATTATAAAAAAGCCTGGAGCTC 17543 29 100.0 34 ............................. AAAACAGGATTAAGTGTAAAACCAAAAAAAACGG 17606 29 100.0 34 ............................. ATTTTCGTATAATAGTTTTGTCAGTTGCCATTTT 17669 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 9 29 100.0 35 GTATTAATTGTACCTAGTGGAATTGAAAC # Left flank : CCTTTTAAGATGTATTGGTAGAGTATGTATGTCATTTTAGTATATGATTGTGGTGAAAGAAGGGTGGCTAAAATGTTGAAACTGTGTCGTAAATATTTAAATTGGATACAGAATTCTGTTTTTGAGGGTGAAATATCTGAAGTACGCCTAAAAAAACTTCTATATTCAGCTAAAGAATTTATGGATGAATCTGAAGATAGTATTATTATTTTCAAAGGACCTAATCATAGCTCTTTGGAAAAAGAAGTAGTGGGAAAAGAACGGTGTAGTATAGATAATTTTCTGTAATTTAGTTGTCGGAGACTTTAGTAATGTTTCCTTTTTAAGGAAAATTCTTCTTAAGAGTTCTTTGACTTGTTGATTTACAGCAATATAAGTGTGGTGTCGATCTCCAGCACTTTTTGTACTTTTAGGGATCGACACTATTTTTGACCTTTAAATATCTTTTGGGGGATTGTAACTCATTCATTTTAAGTGGTCTTTGGGGGATTGATGGTAGA # Right flank : ATGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTGTACCTAGTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : NA // Array 1 5263-2780 **** Predicted by CRISPRDetect 2.4 *** >NZ_VVZZ01000157.1 Bacteroides faecis strain BIOML-A1 scaffold157_size5269, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 5262 29 100.0 34 ............................. ATGATCTACACGCCTAAACAAGCAGGAGTAAGAG 5199 29 100.0 36 ............................. ACTAGAGACAACTAGTCGGGTACGACTACGAACACT 5134 29 100.0 36 ............................. CCTATTCTTTCGATTAGGTAGAAACCGCTTGTTGAG 5069 29 100.0 34 ............................. GTGTTTGATTGAGTATCCTTTTTCTTTTCTGATT 5006 29 100.0 36 ............................. TTTGGATACAATGTGTTAAATTTGTCGAGCTTGATT 4941 29 100.0 35 ............................. TAATAATAATTTTTTACATTCTTCGCGCTTACTTT 4877 29 100.0 37 ............................. TTCCTTCTTTTTCATATTCCCATGCCTGCTTCATGAG 4811 29 100.0 34 ............................. ATTGTTGAATATATCGCTGTCATATGTTTTTAGT 4748 29 100.0 37 ............................. CTAGATTCCAATCCGTTGCGTCGATCACTTTTTGGGC 4682 29 100.0 35 ............................. AGGTTATCCTCCCAGGGATATTTATACACCTAACT 4618 29 100.0 35 ............................. CCACTCTGCGTCGCTGGGGAATATCTCGCTATAGT 4554 29 100.0 36 ............................. TATCCATTATTGCATTTTTTATGGCTTTAACATATT 4489 29 100.0 35 ............................. TACAGCCAAGACTCCGGTGATCCCTACCAGCGGAG 4425 29 100.0 37 ............................. AAAACATTACCTCAAATGAATGAAGAATTGAAAGCAG 4359 29 100.0 37 ............................. AATTTAAGAGCGATATCTTCCAAAGTCCGTCCTTTCT 4293 29 100.0 35 ............................. CTGGATATTCCTTACGATCATCCAATTTATACGGT 4229 29 100.0 36 ............................. CCGTTAGCTGCAGAAAATCCTTCCGACACAAATCCC 4164 29 100.0 34 ............................. ATTTTGAATTGCTGCGGGCATTTTTTATGCCCAA 4101 29 100.0 35 ............................. TGAGGAGACAGTTTTGATGGTCGTTCCCTTGAACC 4037 29 100.0 38 ............................. GATGAAAGGATCAACACGCTGCTGCGTTCCCCCTGGTT 3970 29 100.0 36 ............................. ATAATGATAGCGATAATGATGTTTTTATCGTAGGTT 3905 29 100.0 34 ............................. TAGTATCAATAGTTAATAGATAAAGGCATTAATA 3842 29 100.0 37 ............................. GACACAATTTGATGAAGCGATAGATTTCTTTGACTGG 3776 29 100.0 35 ............................. ATCTGATTAAATCCTCTCTGCTTGTGCATACGATC 3712 29 100.0 36 ............................. AGATGAAGAAGAGAATAACGAAACCGACTCCATCTT 3647 29 100.0 36 ............................. ATCTTTCCATTTAGTTTATCACGAATGGATTGCAAT 3582 29 100.0 35 ............................. ATCTGATTAAATCCTCTCTGCTTGTGCATACGATC 3518 29 100.0 36 ............................. AGATGAAGAAGAGAATAACGAAACCGACTCCATCTT 3453 29 100.0 36 ............................. ATCTTTCCATTTAGTTTATCACGAATGGATTGCAAT 3388 29 100.0 34 ............................. ATTGAAGGTTCATGCAGATGTTCCGGCAGGTGGA 3325 29 100.0 36 ............................. ATCATAATTAATAATTTTAATTTACATGTTTTCGCG 3260 29 100.0 36 ............................. CAGATTCCAAGGCAATTGTGACAGAGAATAATGACA 3195 29 100.0 35 ............................. ATTTCTAATAGGACATATATCCTGAACCTAATATC 3131 29 100.0 36 ............................. ACTTTGGATGATACTCGAACTGAATCCGGTACAGAT 3066 29 100.0 35 ............................. GATTTACTTTATTAGGATCTTCTTTCACGTCCTTT 3002 29 100.0 36 ............................. GGTTCACCAACAAGCAAAAGATTCTTATGCACCTTG 2937 29 100.0 36 ............................. CCAGTTCCATCGCCTTGCAATACCGTTCAGGAACTT 2872 29 96.6 34 .................C........... CTGCTTTTCCCGCTGAAATATACACCCAAATCCG 2809 29 86.2 0 .................CAA......G.. | T [2785] ========== ====== ====== ====== ============================= ====================================== ================== 39 29 99.6 36 GTATTAATTGTACCTAGTGGAATTGAAAC # Left flank : CCATTT # Right flank : ATATTTCAATTGTTAATAATATATAAGACTTTTCTCTTATATATGGTTCAAATTACGTTTTGAATCTGCAAGGTACACATATTAATACAGTTGTAGGCCTTTATTGATTGTGGGAATATTGTTTTGTGTAATTACTAGATGAATAGTAGTTTTGGCTTTTTATTATTCTGTTATTATAGTTTGCGTAATAATGAAGATGATCCATTTTTACCACTCATAAGAAATACTTACCTGAGGTACCCATTCCCATTTCTTTCGTATGGTGTTGTATTGATACCGCACATCGGTCTTCAATTTCCAGCCTTTATTTATTTTAAGGATAATGTTGCTGCCCAAAGTAGTTGGTATCACTTCAGATGAAAGTCCCCGATATCTTCGGGCATCCAGATTTTGTTCACCATATATGCTGAGAGACCATTTTTTAGAGATGCTATAATCCATCTGAACTTCAACATGAAAATGGTCCGGATTTTCTCCAAAGTTACTTTTACTGTGCAAAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTGTACCTAGTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-8.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA //