Array 1 28228-29973 **** Predicted by CRISPRDetect 2.4 *** >NZ_WAJR01000029.1 Ellagibacter isourolithinifaciens strain DSM 104140 DSM104140T_contig_029, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 28228 36 91.7 30 AC.....................G............ CTTCCGCGCGCCTCGTTGCGCGCCTTGCAT 28294 36 100.0 29 .................................... GATTCGGTGGTTGTACTTGCCAGCGTTAA 28359 36 100.0 29 .................................... TGATTCCGTCGCTATATACACCGTCAAAT 28424 36 100.0 30 .................................... CGTATGGGTAGAATGATCCGCCATTGATTG 28490 36 100.0 29 .................................... GAGCACGCCGCGCATGACTGTGAAAACAT 28555 36 100.0 30 .................................... GGACGATCTGTTTTTCGTTTTCCTCGATAC 28621 36 100.0 30 .................................... TGCAAGGTGCATGGCGGCACATATTATTTC 28687 36 100.0 30 .................................... TCGGCGTTGAACTTTCGAGAATAAAAGCCG 28753 36 100.0 30 .................................... TCGGCTAGAAACCGACGTCGCGACCGCGTG 28819 36 100.0 30 .................................... TCTTGATTGCAATGACGGCGTGCAGGACGG 28885 36 100.0 30 .................................... AATGGCCGCGACCACTATAACGCGTTCTTC 28951 36 100.0 29 .................................... TACAAAACCATTTCGCGCGATCGCGAGAA 29016 36 100.0 30 .................................... TACATGAGTCCTGACTCACCTTGCAACCCC 29082 36 100.0 30 .................................... ACAGCGGTACACGACTACGTTATAATAAAG 29148 36 100.0 30 .................................... TGAAAGTCACGGGAACCGTAAGGGTCTGCA 29214 36 100.0 29 .................................... GTCGATTCTATCACGCTCAAACTTGAAGA 29279 36 100.0 30 .................................... AAGGTGTCGGCGTTGCCGCCCGCGACGGCG 29345 36 100.0 29 .................................... AGGGATATATCCGTCTCGCCGCGTTCCCA 29410 36 100.0 30 .................................... TATAATCGAAACTGTTAGAATTCTTCGCCG 29476 36 100.0 30 .................................... CAGAACGGGAGTGCCACTACTCAAATACGA 29542 36 100.0 30 .................................... CCCTCGCTGCAAGATCTTCTGCGCAAGCTT 29608 36 100.0 30 .................................... TCGGCAGGCTTCCCCCGGTAGGGGATGCGG 29674 36 100.0 30 .................................... AATAAAATCGTTAAACTGTGTTGCGGAAAA 29740 36 100.0 30 .................................... ACGATACTCGAAGCCGAGTAGAGCAGGCGT 29806 36 100.0 30 .................................... TTGCCCCTTTCTCTCGGTAACGAAAAAGCC 29872 36 100.0 30 .................................... AATGCGGGCGGCGGGACGGGTACCGAGGTT 29938 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 27 36 99.7 30 GTTTGATTACCAGTCAGATTGACACTGCTCCAAAAC # Left flank : TCGTCGTTCGTTCGCAAACTGCCCATCCTCTACACGACGTTCGTCTACCGCCGAAGCGAATTCGCCGACCTTGGCAAGCTCACGGAGCGCATGAGACGCGATATCTCGGAAGTCCTGCTCAACCATCTGGGCTTCTTCCAGTCGTTCGACGACGTGAAGGTCTATTACGACAACGGCCAGGACATCGTGAAGCAGGCGCTCGACCGTTCCGTAAGTCAAATCCTCTCCAAAGGCGTGGTGCAGCGGCGCAAGACATCGATGACCGACTACCGACTCGAGCAGGTCGCCGATTACCTCTGCACAATAGAGCTGGCTCTAGTCAAGTATGAGGGCAAGGAGGGCAGCGAAACATACAACAAGTTCTTCGGCGGCATAGGCCCTTTCAAAAAGAACTGGCTCAAGCAAGCCCGCAGCAAGCGGATGCGGCAAACCAGCTAGTCGCCGCCTCAGCCAGGCGATAGCTTGGTCCCCTTCGCTTAAATCTCGGAACATCCGGAAAA # Right flank : CATTGGAACAAATTCCCCCACTGCGGAGGGGACGGACAACCTGACCAGACAAGTCTCAATGCTCAAGAAAATGCAGGTCAACAATCATTTTTCGTTCATAATCATATACGTTTCCATCGCGTTTGTTCTCCAGAAGCAAAACCTGAGTAGTAAGCCCTCTTGGTACTGACAGTCAGCAAATTCCGGTACTGCGAATCAACCAATTGCGGTACCGCCATAGAATCCGTCGCAAGCATCCAATCCGGGATGCGATAGACGGAAAGGAATCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGATTACCAGTCAGATTGACACTGCTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.30,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //