Array 1 475996-482635 **** Predicted by CRISPRDetect 2.4 *** >NZ_SPSB01000003.1 Algoriphagus kandeliae strain XY-J91 NODE_3_length_837332_cov_84.872910, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================================================================================================================================================================================== ================== 475996 37 100.0 36 ..................................... GAAACCACACTTAACTATGAGTGAGAATATTTCATT 476069 37 100.0 36 ..................................... TAAAAATCAATTTTTCTTAGAGACTCTTCCTCTTGG 476142 37 100.0 36 ..................................... CTGACCAATCTTACTTTAATCATAATAATTAGTGTT 476215 37 100.0 36 ..................................... TCTGATTGGTGTGTTGGCTCCGGGATTTCGAGCAAA 476288 37 100.0 34 ..................................... CATATCCTAGGAGCATGTGTCTTCCGTTGTTTCT 476359 37 100.0 34 ..................................... ACTACTTCTTTGTAGTTGCCGAATTCGTGTCGTT 476430 37 100.0 34 ..................................... AAGCTTTTTGATGTCCTTGTCCTTTTTGGCAAGG 476501 37 100.0 35 ..................................... GAATCAAAGCTGTTGCTTTGGTGATGCTCATGCCT 476573 37 100.0 34 ..................................... TTTAGGATGTACAGGACTAATACCATAATAACGA 476644 37 100.0 36 ..................................... CCTTTTGCCGTGTTTTCTTCGACATCAAGCTTTATA 476717 37 100.0 36 ..................................... AGAGGAGAAAAAGGAGAAATAACTTTTTCATGGTCG 476790 37 100.0 35 ..................................... GCTCTTCTATTGTTTGGAAAGAGTTTCCTAACTCT 476862 37 100.0 36 ..................................... GATGATGTGATTAGTCGCTCCACCTCTAAGGGTAGA 476935 37 100.0 34 ..................................... TGAAGGACCAAGATTTAAAAGGAAGAATACATTA 477006 37 100.0 34 ..................................... TCCAAATTTCAGCCTGCTTCCACGTTCCCCAGTA 477077 37 100.0 35 ..................................... CATAGTAGTAAATGGGATTGACCTGCATCCCGAGG 477149 37 100.0 35 ..................................... TTGAGTAAAAACAACAAAGTCTCTATTATTATCAA 477221 37 100.0 36 ..................................... CCCCCAAGCAAAAGCTTAGGGGATTTCAACTTAAAA 477294 37 100.0 37 ..................................... ACAGGAAGGTGTGAGTCGTGTGCTTGAATAGCTGACC 477368 37 100.0 34 ..................................... ATGCCCCCTTCTTGCCATAGGTCTGCCCTTTCGC 477439 37 100.0 36 ..................................... AGAAAGTGATAAAATTGTACACTATATATATAAGGT 477512 37 100.0 36 ..................................... ATTATTGTAAAACACCATATGTTCACCATGTTCACT 477585 37 100.0 36 ..................................... AGGATTGAAATCTTCCGTAGTACAAAAAGTATAACC 477658 37 100.0 36 ..................................... TCTCGCTCCATAGCGATAAAGACTAATTTGTCTGGA 477731 37 100.0 33 ..................................... AACTCTCTGCCACCAGCGATAATAACTTTAAAC 477801 37 100.0 36 ..................................... AGTATGCGATGATATCTATCATCACTTAACTGATTA 477874 37 100.0 35 ..................................... TGCGTTTAGATTTCTTATCAGATGCTTTGAGTGTG 477946 37 100.0 36 ..................................... AGAGTACCAATGGTCTCAAGGGTGGACTGAGAGGCA 478019 37 100.0 35 ..................................... GGAGAATAATGCACTCGTTGCACTAGTTTTATATT 478091 37 100.0 33 ..................................... TATCTTTTCATTTTCTAAATAGATCTAGATGTT 478161 37 100.0 35 ..................................... TATAGTGGTCAATCCAATCTGACCAAAGTCATTGT 478233 37 100.0 36 ..................................... TTTTATTTTATTTTACAATTTGCTTTCAATAGTTTG 478306 37 100.0 37 ..................................... CCATTTTTGGAGAACTCGTTACTCATAAGTAGGCAGG 478380 37 100.0 35 ..................................... ACTCTGTTACCTTTCTCTCTGGTCACCATTAGACC 478452 37 100.0 36 ..................................... CTTGGTTCACGAGTTCTTCCACTCGCTCTTTATTTT 478525 37 100.0 37 ..................................... GATGGAAACAAGAAGATGAGACATAGTGAAAGTCCTA 478599 37 100.0 35 ..................................... TGTACACACCCACCCAGAAAGAATTTAAACCCACC 478671 37 100.0 35 ..................................... GGTGATGTCGATTACTGGATGATTTAAAGTGTTTT 478743 37 100.0 36 ..................................... CAAAAGACAGGATGCTCACTGCAAACTCTTGCAATT 478816 37 100.0 36 ..................................... CATGGTATTGGAAGGTCAAGAGTTATTAAGTACTTG 478889 37 100.0 37 ..................................... ATTAAATGAATGAATCGGTCAAATATTTTCTTTCCAA 478963 37 100.0 36 ..................................... ACTGAAGTAAATGTTTTCCGCTTCATCACCACGTAA 479036 37 100.0 36 ..................................... CTAACAACATCCTCCTTGTCATGAAAGATGAATGCT 479109 37 100.0 35 ..................................... TTAGTTCCTACTTACCCTCAACCTGATAACTGGCT 479181 37 100.0 34 ..................................... GCGGTTTTACAAACTTATTGATCTGCAAATCATA 479252 37 100.0 36 ..................................... TTCTGGTATTCGACTTTTTGCAATTTAATAGCCATG 479325 37 100.0 36 ..................................... TAGAGTTTCACTTTCCCAATAGGGCTTTGAAGCACC 479398 37 100.0 36 ..................................... AATAATTTCCTGTTTTTCGAATAATTGATTCCAAAT 479471 37 100.0 36 ..................................... GTTTGATGAGTTTTTCTCACGCCCTGCTGAAGCACC 479544 37 100.0 35 ..................................... TTTATTGAAGATGTACTTTGTTCTTTCTGTTAGTG 479616 37 100.0 35 ..................................... GCTGTTGTAGGACATTCTTTGTCAATAGTCACAGG 479688 37 100.0 34 ..................................... GGCTTAGGTACAGTGCTTCACGACCAAAGCCAGG 479759 37 100.0 36 ..................................... ATTTTCTGTAATGTGAGTGTGGTTAAATGCTGAGTA 479832 37 100.0 37 ..................................... TATCTGTTATTCTATCCCTGGTACTCATTCTCTAAGT 479906 37 100.0 35 ..................................... CAATCACAAACAATTTGATAGCCAGCAACCACATG 479978 37 100.0 34 ..................................... CTCCTTCTCACTATCATGTGTACAAAATTATTAG 480049 37 100.0 35 ..................................... AACAACTATCACCCCGTTAATATGGGTCATAATTA 480121 37 100.0 35 ..................................... TTTCCTGTTTTGGTCATGTGAGTGTTTAATTTACT 480193 37 100.0 35 ..................................... GGTCGTAACCTTTCCTTTCGGAGAAGCGGTTGCTT 480265 37 100.0 35 ..................................... AGTACAAGACCGATAACTAGGAACAATACTCCTAC 480337 37 100.0 35 ..................................... ACAAGTCTTATTGTTTTAATCATAATAATATGTTC 480409 37 100.0 34 ..................................... TCCGTCGTCCATTCTGGCTGGATTTGGAGTGAAG 480480 37 100.0 36 ..................................... ATAAGATTGAAGATTGATTATGAACTGTGCTTAGTG 480553 37 100.0 37 ..................................... AACACTGCAAAGTGCCACTGAGAATCTTTTATCTGTT 480627 37 100.0 36 ..................................... ATTGATTGAGATAATCTGAAAGATATTTCATGATAA 480700 37 100.0 37 ..................................... ACTTTCAGATGGGATGGGTTGCGCTAAGCCTGTAGTC 480774 37 100.0 36 ..................................... TTTCGCCTATATCCTTGGAATACATCTCTCGATACA 480847 37 100.0 35 ..................................... ATCCGTTCCATGAGCGAATAGGTATCTTTATGATA 480919 37 100.0 34 ..................................... TCTAGCGACCTATCCAAAGGGTGTTGGGTAAATA 480990 37 100.0 33 ..................................... AATACTCTTTTTCTGATTTGATTTTCTGAATTT 481060 37 100.0 36 ..................................... GTACGGTCCGGAATCTACACGTATCTGTTTGATACT 481133 37 100.0 35 ..................................... CTGTTTGACTTGCAGGTGATATGCATCACTATTTA 481205 37 100.0 34 ..................................... TCTAGCGACCTATCCAAAGGGTGTTGGGTAAATA 481276 37 100.0 34 ..................................... TGTCCGGGTTTCACGTTCAGGAATGCTTTCTGGA 481347 37 100.0 36 ..................................... CTTTGAGGATCCGTCCCAGAAAGCGATTAAAGCCTG 481420 37 100.0 34 ..................................... TCAGAAAGTTTGACTATTACAGTTGAATTTGCCT 481491 37 100.0 36 ..................................... ACACATATGTATGTTGGATAAGACTTAGGCTTCATA 481564 37 100.0 34 ..................................... CGCATAAAGCTTTCGTTCCAGATGGAGGAACGGA 481635 37 100.0 35 ..................................... AGTACAAGACCGATAACTAGGAACAATACTCCTAC 481707 37 100.0 35 ..................................... ACAAGTCTTATTGTTTTAATCATAATAATATGTTC 481779 37 100.0 35 ..................................... TGAGATATAAACTTCTTCATGATGTTAGGATTGTC 481851 37 100.0 34 ..................................... TCCTACATCAAGGACATAACAATTAAGACCATAA 481922 37 100.0 34 ..................................... CGCTCGCTCTTGCTTTAAATTCCATTTGTTAATA 481993 37 100.0 36 ..................................... CCTGGAGACACCATTTCTAAATGCATTTTAGCATAA 482066 37 100.0 35 ..................................... TAGGCTTTGAAAGTTTGTCTGTTCATAGCATGGGT 482138 37 100.0 33 ..................................... TTTTCTATAAAGACGTACTTGAATCTGCTCATA 482208 37 100.0 35 ..................................... TTCTGAGCGACATCTTTGCGGATGTGGATGATATT 482280 37 100.0 34 ..................................... TACAATATTGTTCATATTAACAATAACCTACGTT 482351 37 94.6 210 .......T....G........................ TCAATATCTCCTGATATAACATCAACGCTTGATACTGTCAGAGTACCAGATCCACTAAAACCTGCCTGCGGCAGGCAGGCAAGGAGGAACGAGCGTGAAGAAATGATCCGGTGGATCATTTTAGCGAGGGGCCAGACTGTAGGGCGGGCTATTAGTGTAGTTTTACACATTGGTAAAAACTGTTCAAGAGCCCTCCCTATACACGGCTAT 482598 37 81.1 0 A..G..TT.AA.A........................ | G [482600] ========== ====== ====== ====== ===================================== ================================================================================================================================================================================================================== ================== 90 37 99.7 37 GTCAGAGCACCACATCCACTAAAACAAGGATTAAGAC # Left flank : TTCGGTTTTTTGATAGAAGAAAACAAAAGCGGATTTGGGAAATATTTAAAAGAGCCAATACCAAATCGGATCTATAGGCTTGAAGGAAACTTCGGGAAGGGTGATTTTTTCAACGTCAAAAAACAAAAGGAAGTGGAAGGCAATAGCCATCCCCTTCTGCGATTGGTAGAAGGAAAAGTTATCAAAAAGGTGCACCAGGCATTCGCCTTTGTCGACGGAAACTTCATTCCACCTGAACTTGTAAAAAAGAATAGGCTGATGACCAATGAAAATGTAAAAGGCACCGCATTATTAGCCCCCCTAAAGGGTAAAAAAGAGTGGGCTTGGAAAGTCATTTCCATCCAAAAAAACGCATAAAAAAGGACTTTTGATATTAATTGAAAAAGTCTAGATTTGAAAATGACAGTAGAAAAAAGAAAATTTATTTTCTTAAAACAATGGTTTTTCGGGTGGTTTTTCAATCATAACCACTTTAAAATCAATCGAAACCAGAGTTAGCT # Right flank : CTGTAATTTGGCTGCATATAGTCCCCTCTCATCTAGGTCAGAGTACCAGATCCACTAAAACCTGCCTACGGCAGGCAGGCAAGGAGGAACGAGCGTGAAGAAATGATCCAGTGGATCATTTTAGCGAGGGGCCAGACTGTTGGGCGGGCTATTAGTGTAGTTTTACACATTGGTAAAAACTGTTCAAGAGCCCTCCCTATACACGGCTATATCGGGATAAAAAAAATCCATTAAAACTTTTCAAAGGTAGCCGGACAAAAAGGATTGAGGATAAAAATCAGACCTTGAATTCTTATTCGCCTAGTTAGCATAGAACCAGGTTTCTAACTAGGCTAATTATATTCCTTCTATACTTATCGCATAAAGAAAAGAATTGGGACATATTTTTTCTAACCTTCAGAATAAAATAAATATTGAGGTTAATATGAGATAAAAAATTACACTCACTTTGAAGACCAGCCCTATAAATTTTTTCTTATTTTGAAATTATCATTTTTATC # Questionable array : NO Score: 3.07 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.17, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGAGCACCACATCCACTAAAACAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //