Array 1 7279-6048 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIQD01000200.1 Vibrio cholerae strain A110912Z1 NODE_383_length_8211_cov_13.938375, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 7278 28 100.0 33 ............................ ACTAGGGAAGGTTTCACGGCGATCGAATATGGT 7217 28 100.0 32 ............................ TATCGGTTCACCTATCCCTATTTTAGGGGAAC 7157 28 100.0 32 ............................ GGCCGCTAAGACAAACTCAGCTGGATAGTTAG 7097 28 100.0 32 ............................ TTCCATAAATTGTTATAGAGCGTTCGTGTGTT 7037 28 100.0 33 ............................ CACAGACAGGGTGTAACTAATGAAAGACGATAT 6976 28 100.0 32 ............................ TTTCAGAACCACATCAGAGATCATCTGTTTTG 6916 28 100.0 33 ............................ CGCAAAAATGGTGCGCCGTGCAAACGATATATC 6855 28 100.0 32 ............................ TTATGGGCGCCAAAGCGACGCACGATAGCGGT 6795 28 100.0 32 ............................ TTTTTGAAAAGCCAATGAAAAAACTCAAAAAT 6735 28 100.0 32 ............................ TTAAAGATGGCAGCAAAAAACCGTGGCTTTGC 6675 28 100.0 32 ............................ ATATTTTTTACGCTCCGTAGCAGGAAGTTCCA 6615 28 100.0 32 ............................ AGTCAGCCAAGTGCTGATCGGTATGTGATATA 6555 28 100.0 32 ............................ AATACCAGAAAGCAGTTTTTGTACCCATCCGC 6495 28 100.0 32 ............................ TAACGTTAAAGAAGTCGGCACAAGAGAAATAA 6435 28 100.0 32 ............................ TGTAGTGTTCCGGTGATAGTGTTTCTTACGTT 6375 28 100.0 32 ............................ GTATGAAGATCAAGGATTGCTAATTGCTGGCG 6315 28 100.0 32 ............................ GCTATATAGGCCTTGCTTTTTAAGTTGGTCTT 6255 28 100.0 32 ............................ TACTGAATCCGCATGATCTGCCTGACAAAATT 6195 28 100.0 32 ............................ TAATACACCAAGGGGTCGCCGTTGCTGCTCTA 6135 28 100.0 32 ............................ GCTTTGCACCCGAAGCGCGCGGCTCATAAAAA 6075 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================= ================== 21 28 99.8 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GCATTCAGGTGAGCACAAATTTAGGCGTGGGTTTATATGATGCAACTGACCCCTTTTGCGGTACACGTGAGCCGAATGATCGAGTGAATACGGTAGATCATTTCTACACGAAGCTATTTAAATTGCCTGAAATAATGCATACAGCGTCAGCAAAGGTAGAGGCTGAAAAGAGAATGAAATTTATGAAAGCTTACTTAATTCAGTTGGGAATGGAAATCGAGCCATACAGCTAACAAACGCCTCAAGAGGGACTGTCAACGCGCGGCGTTTCCAGTCCCATTGAGCCGCGGTGGTTACAGTTGTTGTGTTTGAGTTTGGTGGTAATGCGTTGCCAGCCCCTTAGGCGGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTGTTGATTTATATTAATAATAAATCGAGTAAAAAATAAAAGGTTATTCTTAGGAATTTGATGTAATTACTATTATTAACAATAGGTTACTGCTAAAGTTTCATA # Right flank : TATTTATAACTTAGGCATTTGGGATCGGCCAGTTAACAAACGCCTTAAAGGGACTGCCAACGCGCGGCGTTTCCAGTCCCAATGAGCCGCGGTGGTTGCAGTTGTCGTGTTTGAGTTTAGTGGTAATGCGTTGCCAGCCCCTTAGGCGGGCGTTATGCTTAATCCATAAAATCAGTAGGTTGTGTTTGTCGATTCCCTTGGCATTTCGTTCAGGTTTTGTCGGCAATTCAATATTGTTTTTCGCTGCCTAATGAAACAGCAATGTATCTGGCGCTGTAAATTCTGAGTGATTGCCTCATTGGGTTTTTGAGTCTGTGCGAGGTTAGTATTGTTGTCTCAAGTCGCTTTGAGCAGTCTGGTGCCTTTACTTACAGGCTTAAAGTCTGTCGGCAATTGAATATTGTTTTGCGCTGCCTAATGAAACGGCAATGTGTCTGTCGCTGTAAATTTCAGTGTTATTGCCTCATTGAGTTGTCGCGCCCATGCGTGGTGAGTGAGTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 61-448 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIQD01000055.1 Vibrio cholerae strain A110912Z1 NODE_71_length_3672_cov_15.784586, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 61 28 100.0 32 ............................ CTGACTCGTGGGCGAGCGTTTCCTGCACTAAC 121 28 100.0 32 ............................ TTTACACTGTCTTTGCCTTTCTGATAGTGTCT 181 28 100.0 32 ............................ ACCCAAAGCAATCAGTATTCCAAGCAATGACA 241 28 100.0 32 ............................ TTAGCTTTCAATTGAGCCGCATTTGTTACTGC 301 28 100.0 32 ............................ TCTATTGCGGTAACTGCACTTCACCTTCGATT 361 28 100.0 32 ............................ TTGAGTGTCAGTCAGCGCTTTCTTACTTATCA 421 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================ ================== 7 28 99.5 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TTTTGGGAAATTTGATGTAATTACTATTATTAACAATAGGTTACTGCTAAAGTTTCATAGG # Right flank : ATATTTATAACTTTGGCATTTGGGATCGGCCAGTTAACAAACGCCTCAAAGGGACTGCCAACGCGTGGCGTTTCCAGTCCCAATGAGCCGCGGTGGTTTCGGTTGTTGTGTTTGAGTTTAGTGTTAATGCGTTGTCAGCCCCTTAGGCGGGCGTTATGCCAATTAGGAGGAATAATGAAGCCAATTTTTACGATCCATGTGGGTGAATACCTTGTGGGCTCATATTTAGAGAATGAATTTGGTAAAGAAATCAATGTATGGATCCCATCAAAAGATACGGGAGTGGATTTTTTACTGACTGATAGTTCAAATCAAAAAACAACATCTATTCAAGTAAAATTTTCACGTGATTTTCTAATCACAAATGGCACGGATTTACAACAAAAGGAATTGTTGTCATGTGGATGGTGGACTCTTAATCGTGAAAAGATTGAATCATCTAAAGCTGAATTTTGGGTGTTTGTTGTGAATACATTTAATGAGAAGAATATGCAGTTTAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 17688-21738 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIQD01000088.1 Vibrio cholerae strain A110912Z1 NODE_140_length_97246_cov_21.728863, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 17688 28 100.0 32 ............................ TTATGAAGTTAATGAACGTAACGGAATGCAAG 17748 28 100.0 32 ............................ TTAACCATATTTGACGATACCGTCAAGGGGTA 17808 28 100.0 32 ............................ CGCCGGTTGATTCATCGCACTGTAAAAGGTAT 17868 28 100.0 32 ............................ ACCACATTCGTTATCACCATCCGCGTTACATT 17928 28 100.0 32 ............................ CACACGGTATTACCCCAACGATCACCGCTGGA 17988 28 100.0 32 ............................ ATACTTACCGACGCGCACCGGAATGCCGTACA 18048 28 100.0 32 ............................ GTTCGCGCTTACTGCGAAAAAACAATCGAAAA 18108 28 100.0 33 ............................ TCTAGTCCCAATTGCTCAGCGACAAGTTTGAAC 18169 28 100.0 32 ............................ TTATCAATCTGCTACCTATAACACGCCTTCGC 18229 28 100.0 32 ............................ AGTACATCATGGAACACGCGCATGAGATGAAC 18289 28 100.0 32 ............................ ACAAGATAAAGCAGGGATGGTTCGTTGGGGCG 18349 28 100.0 32 ............................ TCGCCTTTATGGCGGGCTTGTATCCTTCTCTT 18409 28 100.0 32 ............................ ATCAATAAAGTGGCGTTCTCTTTGAGAGATTG 18469 28 100.0 32 ............................ CGGCATGAGATGCGGAAGTTTTACACCATTAA 18529 28 100.0 32 ............................ TACTCTTTGGTTATGAAGTTCGGGTACTTTTC 18589 28 100.0 32 ............................ GTATCGCTTACGTCGATAACGTCTGAGACTTC 18649 28 100.0 32 ............................ TCCATCAAGATGACTTCAAGCTGCTGCAAGAA 18709 28 100.0 32 ............................ AGTAAAAAGCGATGATGATGGCAATCTTATTC 18769 28 100.0 32 ............................ AATGCGACAACCGAGCCGAAATAACGGCAGTT 18829 28 100.0 32 ............................ ATCCAGTACGTGGTCGAAAAAAATCAGGTTCG 18889 28 100.0 32 ............................ TTTTAAACAGGGTTTAAACGTGGCGGTGAATG 18949 28 100.0 32 ............................ GTTACCCACGCCATAAACTTGCGAATGATGAT 19009 28 100.0 32 ............................ GGAACCTTCCGTGGTGAGAAGGTGGAGCGCAT 19069 28 100.0 32 ............................ TACATCAACCAAGCACTGGAACAAGCCGACGA 19129 28 100.0 32 ............................ AACGTGATGGTATGGATCGAGTAACGCTTCTT 19189 28 100.0 32 ............................ GTGTTGAGCTTTCAGAACACGTCAATTATGAC 19249 28 100.0 32 ............................ TAGATGAGCCTGTCGTCGAAGAGCAACCAATT 19309 28 100.0 33 ............................ GATAATGGCCATCACCGAACAAACAATCTTTTT 19370 28 100.0 32 ............................ CATACGCTGAAATGGTGTTTAGCAAACATCAC 19430 28 100.0 32 ............................ ATCCAGTTGCAAGCTCAAACTGCTTTTTGGAT 19490 28 100.0 32 ............................ ATACGAGATAGCGCCAGCATTTGCATAGTTTG 19550 28 100.0 32 ............................ GTTTGCTGAAATCATCGAAGCAGTTGAAGAAA 19610 28 100.0 32 ............................ AGAAGAAAAACGCACATTCGATATTGATTCTC 19670 28 100.0 32 ............................ CTAAGCTCACATCAACAGACAGCTTACATAAT 19730 28 100.0 32 ............................ GAGCGTCGTGCTCGCCGAGATGCAGACAGAAT 19790 28 100.0 32 ............................ CCTATGGCGCAAGCCTCCATGCAACCTCTAGA 19850 28 100.0 32 ............................ GCTACCCAAAAGCTTTCTGTTTTCATAAAATC 19910 28 100.0 32 ............................ AGTGAATCAATCTGCGAATTAGATCTGCGTCC 19970 28 100.0 32 ............................ GAAAAAGCGAAATCAAAGGGAGTGAGTCTCCG 20030 28 100.0 32 ............................ CGTTACCAAGGCGGTGGCGACACGAGAAACGG 20090 28 100.0 33 ............................ ACTGACGTTTATTCTCTGGCCTTTCCGTTATGT 20151 28 100.0 32 ............................ GCAAGGGGGAGGGTGGGTCAAAACCTCCCTAC 20211 28 100.0 32 ............................ TGAAAGGATTGTTTTGCGGTTTAAGCCCGTAT 20271 28 100.0 32 ............................ CACTGGCAGCAGCACACCATTCAATCGCACAT 20331 28 100.0 32 ............................ GACAACCCAAAGCGCAGCCTCACCCCACTTGA 20391 28 100.0 32 ............................ AGAGCGGAAAGCTCAGACATCATTCCAGATGG 20451 28 100.0 32 ............................ AAACCAAGCGAGTGACATAATCGATCACGGCT 20511 28 100.0 32 ............................ GCTAGTTCAGAGCTTGCAGTGACCGTCACCAA 20571 28 100.0 32 ............................ GCTGGTAACATTACAGACCAAACCGATCAGAC 20631 28 100.0 32 ............................ ACCATGAATCACTGATCATGCGCATGATGTCG 20691 28 100.0 32 ............................ CAGCCAAAGAGCGTGTGCTCAAAGTGCTGCAA 20751 28 100.0 32 ............................ GTATTCGCCATAGCCAGTACGTTGATGGCGTG 20811 28 100.0 32 ............................ GCTCTTTGGGGATTGGGTCGTCACATTCCAAA 20871 28 100.0 32 ............................ CTCTATTTGAAGGCATGGACGCCACGCGAAAT 20931 28 100.0 32 ............................ TGACTGAATTTTCTAACCAAATGTTCGCACTC 20991 28 100.0 32 ............................ GAAACATGGCATTAGAAGCAGAGAAAATCGCC 21051 28 100.0 32 ............................ GCAATGGCAAAAACCAGCCTATGTACATTGTT 21111 28 100.0 32 ............................ ACCCAAATAGTTCGACTCTTCACACTCACCAA 21171 28 100.0 32 ............................ TCGTATGTCGCTTACTTTTAAGTCATTAAGAC 21231 28 100.0 32 ............................ TTGACGATTTATACAGCTTCCATCTGAAAAAA 21291 28 100.0 32 ............................ ATTCGCATTAATCCCCGCCAGCCTTGCAACGT 21351 28 100.0 32 ............................ CGTCTAACGAAATGCGTTTGGCGAGCTGTTCA 21411 28 100.0 32 ............................ ACCAAGCGCCTGCGGGCGCTTTGTTATATCCG 21471 28 100.0 32 ............................ AGCTCATTTCTAAGCTTCTTGCTGTGTAAGTC 21531 28 100.0 32 ............................ GTCACGCACAGTTAAATAAATAACCATGCTCG 21591 28 100.0 32 ............................ AGTGGCCCGAAATGGATTTGCTGCTCAAACGT 21651 28 100.0 32 ............................ AACACGATTGGCACGATCAAAGGGTGGTGGGA 21711 28 92.9 0 .........................TT. | ========== ====== ====== ====== ============================ ================================= ================== 68 28 99.9 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GATGTAACTTACGTAAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAACGAATAGAGCGGGATATGCAGCAAAAAGCCGAACTATGGGCAGCAAAATCTGGTAAATCGCTGGTGGAATGTTTAGTGGATTTACAACAAAGCAAGCCGACAGCGTTGTGCTCCTTGCCCTTTATTTACTTGCATAGCCAGCAAACCAAGCAACGTTCACCAGAAAAAAACAGCAAGTTCCCGCTGTTTATTGAGATGCAGCAGCAAAGCACATCTCAAGATGGGGGCTTCGATTGCTATGGTTTGAGTAGCAAAGCGAATGGGCAGTCAATGTTGGCTACTGTACCGCACTTTTAAATTGAACGAAAAAGGGTAGTTTTAACCCTTTATTTTTGATCTTTAAAAATACGCTTTTAAAACAAATAGTTGCAACGGGTTGTTTTTAACAAGGTAAAAAGATGATTTTTATCCTAACAGCCTGTTGCAGCTTATTTTTATCGGTTTATTCTATT # Right flank : AGAAAGTAAATCAAACGAGGCAGTTCACTTTCTAGATTACGTTAAGGTTCTTACGTTCTGCTACGCATGTTTATTAGGGTTTTCTTAAATGGTCTTTTCACAAGCATTAGTGACAAATTTCCGAGGTGTAATGATTAAGATAGCCCAGCTGATGAGTATCAGTTGAGGGGTAGTCACCATGAGCATTGTTGGTTGTGTTAATATCAAATCCAAGCATATCGATCGAACATGTCAGATGGTCTCGTAAGTCAAATTTTACTCAGAGCGAGTTTTGCGTCAATAAAAATCCTTTTAAAATCATAAAGTAATGAGCTATTGGATTACATCAGCTTCCATGTCTTAAGTGGAGGTTATATTCTAGATTATTTTCAATTGCCGAGTACCAGTCACAGATAGGCTACCTTTGGCGGCCTCTTCTATATGCCCGCTCCACCAGCACATCATTGGTTTTCTACGTTCGAGATAATCCGTGCGGTTATAGGCACTTCGAACTTGGTTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 61-1530 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIQD01000075.1 Vibrio cholerae strain A110912Z1 NODE_108_length_1442_cov_14.334951, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 61 28 100.0 32 ............................ ACACGAAGAGGCCCAGTTACGATGCTTACAAT 121 28 100.0 32 ............................ GTATGTCCTCACTGCGGTACACCAATCCCCGA 181 28 100.0 32 ............................ AACTACCGCGTACCCTTGACCTTTTTTGAGAA 241 28 100.0 32 ............................ GAACGATTGCGACAGAATAACGCCCCATAATT 301 28 100.0 32 ............................ AGTGGGTTTTAGATGGAGATCAGCTTATCGTT 361 28 100.0 32 ............................ CTTGCGAAAGTTATCGCTGTCGCAAAGGTAGT 421 28 100.0 33 ............................ TTGGAGGAAAAAAAGTGAGTAGTCTCGAACTGG 482 28 100.0 32 ............................ AGCTGGAAAATTTATTGGTGAGGATGGCCGTC 542 28 100.0 32 ............................ TCTACTGTCCGACTATCACCGTACTTAATAAG 602 28 100.0 32 ............................ ACAATATGACGTTGATGCAGTTGTACTGTTTG 662 28 100.0 32 ............................ GTTAAATATATTATGGTCGCAATGGCGACCAT 722 28 100.0 33 ............................ TTCGTCAAACGGGTGATATTGCTTTATCCAGCG 783 28 100.0 32 ............................ ATAGGAACCAAAACTTCTTCCTTGCTCTCTGG 843 28 100.0 32 ............................ TGCAAGGCGCTGCGGCGTAATAGTTGAGGCTA 903 28 100.0 32 ............................ AAAACGCTGAGCGCGTGACGGTTTCACCCTCT 963 28 100.0 32 ............................ GACTCAACGTTGTGTTTAAGCCGGATTTAGTG 1023 28 100.0 32 ............................ AATAAACTTTCCAGCTGGAATCATGGGCAACC 1083 28 100.0 32 ............................ AAAACGCTGAGCGATGATGGAGTACTGGCCGA 1143 28 100.0 32 ............................ GCGAAACCGGAGAGCTGAACGATACCTACATC 1203 28 100.0 32 ............................ AAATGAAGATAATCTAACCGTGAAAGTTGCTG 1263 28 100.0 32 ............................ TGACTAGGGTCGGTACCGATGGCATTAAGCAG 1323 28 100.0 32 ............................ CGCTGAAAACATTTCGTTGTAGGCGTTTAGTG 1383 28 100.0 32 ............................ GTTTGGGCTCTCGATATGTACATGAATGTCAC 1443 28 100.0 32 ............................ TTGAGTGTCAGTCAGCGCTTTCTTACTTATCA 1503 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================= ================== 25 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TTTTGGGAAATTTGATGTAATTACTATTATTAACAATAGGTTACTGCTAAAGTTTCATAGG # Right flank : | # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //