Array 1 52991-56202 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJELC010000031.1 Acinetobacter baumannii strain MRSN718 MRSN718_contig00031, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 52991 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 53051 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 53111 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 53171 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 53231 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 53291 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 53351 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 53411 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 53471 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 53531 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 53591 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 53651 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 53711 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 53771 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 53831 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 53891 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 53951 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 54011 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 54071 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 54131 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 54191 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 54251 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 54311 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 54371 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 54431 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 54491 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 54551 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 54611 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 54671 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 54731 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 54791 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 54851 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 54911 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 54971 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 55031 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 55091 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 55151 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 55212 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 55272 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 55332 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 55392 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 55452 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 55512 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 55572 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 55632 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 55693 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 55753 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 55813 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 55873 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 55933 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 55993 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 56053 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 56113 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 56173 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //