Array 1 33771-31539 **** Predicted by CRISPRDetect 2.4 *** >NZ_QAZT01000003.1 Lactobacillus helveticus strain DS18_8 DS18_8_3_length_88460_cov_49.779980, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 33770 32 100.0 34 ................................ AATGACTGATGAACAAAAGACAGCATTGAAGAAT 33704 32 100.0 36 ................................ TGTTCAGCTCTATCTTGATGTCAAAGATCCTAACGG 33636 32 100.0 36 ................................ ATTCTGTAAGGACTGAAACACAAACTCTAAAATATA 33568 32 100.0 34 ................................ ATCGTTATGCAGGTATTACTACTGCTACTAATAC 33502 32 100.0 35 ................................ TCAGGAGATACTGCCGTTGGCTTTGAAGATAAATA 33435 32 100.0 35 ................................ AATTCATTACTGGCATTACTCCAGTCACTGCGCCA 33368 32 100.0 35 ................................ GAAAGGAAATATATATGTCAGTCAAAGTTAATGGT 33301 32 100.0 35 ................................ GATTTTGTTAGAAAATTAACCGATGATTTTTTACA 33234 32 100.0 34 ................................ TACCCACCTAGCTTAGCACCTACATGGAATGACA 33168 32 100.0 36 ................................ CATTGTAGTAAAAGTTGCAGGGTCTTGAGTAAGAAC 33100 32 100.0 34 ................................ AATTAAGTCTAATCATAGGGGCAATAATTGCTTA 33034 32 100.0 35 ................................ TTTTTCGTCTTCTGCTCCTAGTGACTTAGTGAGCC 32967 32 100.0 34 ................................ AAGTGAATCGACAGGTATTGCAGATGATGATTTA 32901 32 100.0 35 ................................ AAGATGTGGAAGAGTGCAAGCACACACAGTCCCAA 32834 32 100.0 34 ................................ TTAGAATACTTATGATCCTTAGATAGATGAACCG 32768 32 100.0 35 ................................ CTCTGATCTGCTCAGCACGTTGCTCTTGCTTTGAA 32701 32 100.0 35 ................................ GATTATTCGGAACAACAGATGATCCTAAATGCTCA 32634 32 100.0 35 ................................ CTAAAGCATACTTAGTAGCATATGAACTGGCTGAC 32567 32 100.0 34 ................................ TACAAACACTTGCCAACTTATAATCCACAAATGC 32501 32 100.0 34 ................................ AAAGGTGTGTGGATACCTGCTGAATATTGGTTAG 32435 32 100.0 35 ................................ AGCATCAACGGCTCTAATTATGTCATTGCCGGTTT 32368 32 100.0 34 ................................ ACCTGATCAAACGTTAGGCAATAGATTAACCGAA 32302 32 100.0 34 ................................ TTTACGAATGTCTTGCCAATTAGTATATTTACTT 32236 32 100.0 34 ................................ AGAATCAAGACCACCTGTTAGCGTTTTACCACCG 32170 32 100.0 35 ................................ AAAGAACATAGTTTGCAGAACTGTTTCCAAGTAAA 32103 32 100.0 36 ................................ GGCTTTAGATGCGTCAAATGCCGCCTGTGGGCTATC 32035 32 100.0 34 ................................ AGAAGATGGATACAATTTTTAGAAATTCCAGTCT 31969 32 100.0 35 ................................ ACACCATATGTGGTCAACGCTTTAATTGGATTACG 31902 32 100.0 34 ................................ ACTAACTGGAACATCCAAGTACTGTGCGGAAACC 31836 32 100.0 35 ................................ ATCGGCTAATTGCTTTTCAAGTGAATCAGCCTTTG 31769 32 100.0 34 ................................ ACTGAGACGCTAGACGCTATTAGATCACAGTCAC 31703 32 100.0 35 ................................ ATCAAGCTTGCCAACGGGTCGATTTTATTCTGTGA 31636 32 100.0 34 ................................ TTTTGAATAGATGGCATGTAAGTCTGATATAGTT 31570 32 96.9 0 ...........C.................... | ========== ====== ====== ====== ================================ ==================================== ================== 34 32 99.9 35 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : GGAGATCTTGACGAATACCCACCGTTTATGTGGAAGTAGGTATGCAGCATGATGGTAGTAGTTAGTTACGATATTAATACGGAAAGTAAATCTGGTCAGCGAAGGTTACGTCATGTAGCCAAAATATGCTTAGATTATGGACAACGAGTTCAAAATTCCGTTTTTGAATGTAAAGTTAATTCGATGCAATTAGAGTTGATGAAAGAAAGACTACTAGACGAAATCGATGATAGCCAAGATAGTTTGTATTTTTTTAATTTAGGGAAGAATTATAAAAATAGAATTAAGTCATATGGAATTAAAGAGGTTATAAATTTAGAATCGCCTGTAATATTTTGATATCGGTGCGAACTGTATGTGAACATGCTTTTAGTGAAGATTCGCACCAATTTTAAACAGGTGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAAATGAATTGAAATCATGATCTAAATATTGCG # Right flank : TTTAGGTCCATTGCACTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAGTCGGCTTCTTCAACCCAGGCTTGAAGTACTAATTATTAAGAGGAGATTATTCAGATGACAATCGAAGAGATGCAAAAAGGCTATCAAAATGAAGTTGCTTATCAAAAACATATGCTTCGCAATCTAGGCTATTGATTCCAACTCTTTTTAACAGTTAGTGCGATTGGTTTGGTTTTAATTTACTATTTCCATCAATCAACTATGTGGCTCTTTATAATCGGAATTATTCTGATGGTCGCCGGTGTTTTAGGAATGTTTGCTTTTGGCTATGCTTCTTGGCGCGGACGGCAGAATGTCACTCTGGTAATCGAAGACTATGAGAAAAAGATTGCAGAAATTAAAAAGTTAGATCAAAATGCTTCCGGAACGGAAAAGATCCGTTTCAAATGATTCTTATATGAATAAAACAATTTCCCCTTCTCTAGAAATT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //