Array 1 74595-74229 **** Predicted by CRISPRDetect 2.4 *** >NZ_BASY01000004.1 Streptococcus anginosus T5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 74594 36 100.0 30 .................................... ACTTGTTCCACAAGCTAAACAAACAAACAT 74528 36 100.0 30 .................................... GCTTGGTCAAGATATTGCAACAATTTTGCT 74462 36 100.0 30 .................................... TTTCATTTTCATTTTCATTTGTAAATTAAG 74396 36 100.0 30 .................................... TTGGGTTGCTGAGAATAATTGCTCCGTCTG 74330 36 100.0 30 .................................... TTGCTTGTATTGATAAACATTTTGGCAGCT 74264 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : ACAGTTGAATGAAAAGTCTGAAGTGAAATCTATGTTAGAAAAATTAGTTGCAACTATTACAGAACTAATTGCTTTTGAATGTTTAGAAAACGAGCTGGATTTAGAGTATGATGAAATAACAATTTTGGAATTGATTGATGCTTTAGGTGTAAAAATTGAAACACTAAGTGACACTGTTTTTGAGAAAAGTTTAGAGATTGTTCAGGTGTTTAAATATCTTTCTAAAAAGAAACTGCTTGTCTTTGTGAATGTATCATGTTATCTGTCTGAACATGAACTAGCTAAATTGGTAGAATATATTCAACTTCATAATATAAATGTACTGTTTGTTGAACCAAGAAAAGTATACGACTTCCCTCAATATGTAGTGGATGAGGACTATTTCTTATCTTGTGAGAATATGATATAATATTAGTAAATATAAGGAATCATTTGAGCTGAAGTCTAGCTGGGACGAATGGCGCGATTACGAAATTTCGAGACAAAAATTGGTCCACGAG # Right flank : ACAATACACTTTAATCATAGGACTTGCAAAATTTTTCAATCGTGCTATAATACCTTTTAGAGACATATCGCTGACTGGAATCTTTTAGAGAGCGCGTGGAGCTGAAAATCGCGCAGAGGAAGGCAGTTGAGACTACTCTGTTAGCTTTTATGCAAACATAAAACGGTGGCTACGTTAGAGCCAATCAGAGGTGTCGACAAACTTTTTTGTTGTACATGAATGAAGGTGGAACCACGTTGCGACGTCCTTTTCGGGATGTCGTTTTTTTTATTTTGTTGAAGGGAGGAAAAGTTATGCTCTATATGATTGGCGGATCACCCTGCAGCGGGAAATCAACGCTCGCTTCCCTTCTTGCTCGGAAGTACGATTTGCTTCATATCAAGCTGGATGATTTGGTAGACGAGATGATGAGTCAAGCAAGTGTAGACTCACGGCCGATTTGCCTTCTTAGACAGGACAGAAATCCGGATCAAATCTGGTTGAGAAATCCAGAGGAGATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 1 8140-7672 **** Predicted by CRISPRDetect 2.4 *** >NZ_BASY01000020.1 Streptococcus anginosus T5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 8139 37 100.0 35 ..................................... CACTTTGTCCGTTATTTGTACGAATAAAATGATTA 8067 37 100.0 33 ..................................... TTTCAAGCGCAGTTGCTTTAGTTTCTGCATTAG 7997 37 100.0 35 ..................................... CTTGGTAATTTTTTGGCTTTAGCCGTCATAATTGC 7925 37 100.0 36 ..................................... AGATTAACAGTATTCCAAAAAATACCTCCATATTAT 7852 37 100.0 35 ..................................... CTGATGTTCAGTGGATGTAATCAATCCGACGGCGA 7780 37 100.0 36 ..................................... TCGACTGGTTTCTTAGCCAGTTTATTCTTGTATTCG 7707 36 86.5 0 .....................T.....A...A-...T | ========== ====== ====== ====== ===================================== ==================================== ================== 7 37 98.1 35 GTTAGTAACCCATATTACCTCGAGAGGGGACGGAAAC # Left flank : CAAGCTAAACCTGTCGCACCCAGATGCCGATGCTATCATTGACTATCTGGAGCATGAGATGAAGAAGGAGCGTGGGAGTGAAAGCAAGGAAAGAGTCTATAACAAGACTTCTACTTTAAACCTTTTGTCTTTTAGCAATATTTTGGAATTTTATCAGGCGGAAGAGTCTTTACTGGAAAGTATCAAATTAGTGAAGAGTTTCAACGGGGAAAGAAATCGTCTAGCGCATGGTCTCGCTGAAATCGATAAAAAGGCAATTAGCTCAAAAAGATTGCGCGCCTTGTTGGGAACATTAAAGGATATCCTCCAGTCCAACTATGATATTAGAGAAGAACGATTCTCCTATTACGATGTTAAGAATGAGGAGTTACTTAAACTGCTCAAGTAGCTCTCAGTTCTTCCTTTTTGGTTCAAAATATGTTATAATCAAAGAAGTTTCCACTTTTGGGCTGTTAAAACAAGATATGGTGGTTTTCTGGTATTTATGTACAAAATATAGG # Right flank : AGATAAAAATCGCTCTAGTGGGCGCTTTTTGTTATTTTGAAGTTCAAAAGTTCTTGAGGCAAAATGTCTCTTAGAAGTTTGAATTGCAAAAGAAAACAAAGGCTGTCTATTTTTTGTAAAAAACCCGAAATTTTAGTATAATGAAAAGACTAGAAGTATGAGGTAATGCTATGGAAATGAAGCAAATTAGTGATACAACGATTAAAATCACAATAAAATTAGAGGATTTAGAGGAACGTGGGATGGAAATGGCAGATTTTCTAGTCCCACAAGAAAAAACAGAAGAGTTTTTCTATGCGATTTTAGATGAGTTGGAAATGCCAGAGAGCTTTTTAGATAGTGGCATGCTCAGTTTTCGTGTGACACCAAAGCCCGACCGATTGGATGTCTTTGTCACCAAGTCTAAGATTGATAAGAATTTAAACTTCGATGATTTGGCAGATTTGCCAGATGTAGAAGAGTTGTCTCAAATGTCTCCTGATGAATTTTTAAAGACATTA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGTAACCCATATTACCTCGAGAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 17673-16847 **** Predicted by CRISPRDetect 2.4 *** >NZ_BASY01000020.1 Streptococcus anginosus T5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 17672 37 100.0 36 ..................................... TCAATTACATTAGAACCAAGAAAATCACCATTATAT 17599 37 100.0 35 ..................................... CATCAAATAATGCAATAACTGTGTAATCATCGCAG 17527 37 100.0 35 ..................................... AATGAAGTAGCATATTGTGGCGTTGTAATTCTAGG 17455 37 100.0 33 ..................................... TGGGTAATGCCTGTTGGGAGTGCTCCATACTTA 17385 37 100.0 35 ..................................... ACTACTGTTACAACTTTCTTAGCGATGTCATATTG 17313 37 100.0 35 ..................................... CCTTTTTAGCTTTACTCTCAGATTGCGCGATAACT 17241 37 100.0 34 ..................................... ACTTTGAGCTACTGCGCTTCGTTCAGCTGCAATT 17170 37 100.0 36 ..................................... GAATTTGAAAGGTCATCTACCTTCTTCTGAGCATCA 17097 37 97.3 35 ..........T.......................... AATTTTCTCATTTTATTTACCTCTCTTTCTATATA 17025 37 100.0 34 ..................................... CTGAAGTTGCTGAAATTTTAGCAGATACGATTAC 16954 37 100.0 34 ..................................... TTTAGCGCAAGAGCAGCAGTGATTGTTTCTTTTG 16883 37 81.1 0 ..............................TTTTTTA | ========== ====== ====== ====== ===================================== ==================================== ================== 12 37 98.2 35 GTTAATAACCCATGTTACCTCGAGAGGGGACGGAAAC # Left flank : TTGATTCGTTGTTTTGAAACGGAGAATCATAAGGAATTTTTAAGTGGGTATACGGGAGAATAATAATGGGATTTTTTTACAACTTAGACGAAGAGGCGAAAAACTTTGCGCAGAAAAAAACGGTATTTTGCCTTGTTATTTATGATATTATTAGTAATAAGCGACGTCTCAAACTTTCTAAATTGCTGGAAGGATATGGCATGCGAGTCCAACGTTCTTGTTTTGAGATTGATGTTGAAAAAACAAACTATCATCACCTTCTTCAAGATTTAGAAAAATTTTATTGTCAGGAGGAGGGAGACAATATAATTGTTTATGTTGGTGATAAGAAAGAGACAGTCATCTTCAACTCTTATGAAGGAGCAGAAATTCTGGAAGATATTTTGTTTTTCTGAAACTTTTAATTTAATGAAAAATGTGGTAAAATATAAATATGTTTCCAAATCTTGAATAAAACAAGATTTAGGGGTCATTCTCTGAAGCTTGATACAAGATATAGG # Right flank : GGTGAAATTCATAAGACTACTTGACAACGTTTTCACATTATGCTAATATATTGATTGTAAAGAACAGTTCTGATAAACAGAGAGGGCGCCCTTAAATTGGTGAAAAATACTTTCACTTTTTTGGGCGTTTTTTTAGTAAGGAGGATTAAAAATGTGAAGAAAGTACAATTGCATTTATCAAAGGTTGAAATAAGGGACGATGATCTGGTGGCTAAGTTACAGGGATTTCTTATGAGCCGAATTTCGGCAGATTTTGCGGCTTTTCTCCATGAGCAAGAAACAAATCCCTACTCTTTGAATCTATACTCCACGAGAGAAAAAATGATCTGGACGGTCAATCTACTCGCTCAGGAAGCAGAAGAAGAGATATTGCCTCAGCTTTTGGACTTAAAAGAGATTCAGTTGAATACTTACTCAGAATCTATATCTGTAAAGGGACTGGAGATTCAGACTCTCTCGCAACAGAGTTTGCTGGGAGTTTTTCAGGAGGATAATCCTAG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAATAACCCATGTTACCTCGAGAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //