Array 1 59964-62647 **** Predicted by CRISPRDetect 2.4 *** >NZ_PZYR01000028.1 Pseudomonas stutzeri strain AK6 Contig_28_len_85584, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 59964 32 100.0 33 ................................ AAGCGGAAGCTCAACAAACTGGAGCAGCACCAT 60029 32 100.0 33 ................................ CCCTTCAGCGCGTCATAAGCTTTCTCACACGCC 60094 32 100.0 34 ................................ CGATATTCAGAGCGATTTTATTACGACCCAGCAA 60160 32 100.0 34 ................................ CTCTGGACTGACCCGAAGCCGCTGCCAGGCGAGC 60226 32 100.0 34 ................................ ATGCCATAACCGAATAGGCGAGCGCGTAGGCCTC 60292 32 100.0 33 ................................ TGACGTCAGCCGCAGGTGCGCGCAGCAACCCGC 60357 32 100.0 34 ................................ TTTCTGGAGCGAGATCGCCGTTAAATGCGTCCAG 60423 32 100.0 35 ................................ TTTGTCCTTGAAGTTGACCATGTTGGTCTTCATGC 60490 32 100.0 34 ................................ AATAGTAGCCTTGTTGTTGACGGCATCCTCCGTC 60556 32 100.0 34 ................................ AAGGCAAGCCGCCAGATCCTGGACGACTCGTCTG 60622 32 100.0 34 ................................ TTCTAGAGACTGTCGAAACCTACGAACTGGATGC 60688 32 100.0 35 ................................ ACCTAACTCATGAAGCGCCGTATCGCGATGAAATG 60755 32 100.0 34 ................................ ACCGAACTGGTGGCGGAGACGAAGTGTGAGACGG 60821 32 100.0 34 ................................ TTAGTCTCTTCCTCAACCAGCCCCATTCCACCGA 60887 32 100.0 37 ................................ TCCCATACGCCATGCGGCAACACCCCGCGCTGGCGCT 60956 32 100.0 34 ................................ ATGGTGAAGTCGCGATGCAGTTTCGAGTGACACG 61022 32 100.0 34 ................................ TGGCCGTCTCGCACAGCCTTTGCCAGCGCCTCGA 61088 32 100.0 33 ................................ ATTTCGCCGGGGTCGCCCTTGAACTCGCTAGAC 61153 32 100.0 34 ................................ AGGTCAGCCGCTTCGGTAATCCTGAACTCCGCCC 61219 32 100.0 34 ................................ TTTGATGGTGTTCAGGGTTTTGCCGTTGCCTTGC 61285 32 100.0 33 ................................ AGCGCGTACAGGCCGCAGACGGCCGCCCCGATC 61350 32 100.0 35 ................................ ATCGACAACGGCACCATCCGCAGCACCGCGGCGCC 61417 32 100.0 35 ................................ TGGATCGTCGACGCCGACGCGGTGCCGGCCGATCG 61484 32 100.0 35 ................................ TGGGCAGTGGACAAGCCCATGCACCCGTCCCTGGT 61551 32 100.0 37 ................................ ATCGCGGCGAGCATCGACCAGGACAGCCGGATCCGCT 61620 32 100.0 35 ................................ CAGTAGGCCCTACCGTCCTTGATCCCTGCCACATA 61687 32 100.0 35 ................................ GAGGCGTGGTGGGACAGGCAGCCTCACCGCGAGCA 61754 32 100.0 35 ................................ CTGTGCCTCTGCATCTGCTTTCTCCGTTGCGGCCT 61821 32 100.0 36 ................................ TAACCCTCCTGGTCGTACTCTCAATCGGCCATGCCC 61889 32 100.0 37 ................................ ATGGGATCACCGCTCGAAGGATGTGAGGCCCGACCAT 61958 32 100.0 34 ................................ ACCAACCCCGGAAGCTCCTTGCCACCTGCCTTTG 62024 32 100.0 34 ................................ CTCGAGTCGGGCACGCTGCTGGCGGTCTACTCGG 62090 32 96.9 33 ...............................A CGATAACCTGACTCGCATTGGTGAGGCCTCTAG 62155 32 100.0 33 ................................ AGGATCGTATTCGCCAGGGCTCGCATGGCCTCC 62220 32 100.0 34 ................................ GTTCCGAGCAGAACGACATTGCCCGCGAAGCCAA 62286 32 100.0 35 ................................ TAACCGCCCAGGGGTTGAAGCGCGCCGACGCGGAG 62353 32 96.9 34 .................A.............. CCCGCACCTCGCCCTTTTCCAGGGTGGCGCGCAC 62419 32 100.0 34 ................................ TTCGAGAGTGGGCACCGTCGCGCCTCCTATGTGA 62485 32 100.0 34 ................................ GGGGTCCACGCGACGGTACGGCCGTTGGGATACA 62551 32 96.9 33 .................A.............. CTTGTGGCTCTGTTGTTGGCGATCAGGGGGAGC 62616 32 93.8 0 .........................A.A.... | ========== ====== ====== ====== ================================ ===================================== ================== 41 32 99.6 34 GTCGCGCCCCACGCGGGCGCGTGGATTGAAAC # Left flank : ACCGTTCTTATGGAAATAGTTGAAGCCGATGATGATCCTGGTCAGCTATGACGTGAGCACGCAGGAAACCGGTGGTGACAAGCGCCTACGTCGCCTTTCCAAAGCCTGCCGTGATTTCGGGCAGCGCGTGCAGTACTCGGTTTTTGAAATAGAGGTCGACGCCGCTCAGTGGACCGTCCTTAAACAGCGCCTGTGCGATTTGATCGACCCCGAACAAGACAGCCTGCGTTTTTACTACCTCGGCAGTAATTGGCAGGCTCGCGTCGAACATGTCGGTGCCAAGCCAGTGCTCGATTTGAATGGACCGCTGATTTTTTGACCCAATTGCGAACCCAAAGCGACCGATGAAACCCGAGAGGTTCGCATGCTACTAACCTATTGAAATCTTTATTTATTTTATTTCCCGGCCGCCGCCTGGACCCACAGATGTGCCTCGTCGACGCCGCTTCGCAAAATGCCCAGTTTTTCTTCACCTAGCACAACGGGTTATAAACCCGTGG # Right flank : CACCTTAATGGCATTCCTGGCGCAAACCGGCCAGCATCGAGCTCCACGAAGACACCCACAACACCGCGGAGGGCGCCGGCGCCGCCGCACTGGCTGCCGCCATTCAGGAACGCGCGCTTAACGCGGGGGAACGCATTGCCGTCGTGCTCAGCGGCGCCAACATCGATCGCCGTGTGCTGACGGAGATACTGGCTGACCACGTGCGGTATTCCGACTGACGTGTGCGATGCCAGCAAGGCAGAAGGCTGCCTGTTAAATCAGGAAACGAGTCCGTCGCCGCAGGCAATTCCCGTCTGGCCCGCGCAACGCCATACTCGCGCCCGCCCGGCTCAGCGCGCGCCTGCGAGGCGCCGGCCGGGGCATCGATCGACAGACAGGTAGGCATCATGCAGGTAGCACATCCGGAAACGAGCCGCAGTCGTCTCGGCCAGTTCATCGAACGGCCAGCGTTCCAGCGCGGCATTCTGCTGCTCATCGTGATCAACGCGGCGATTCTCGGC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.80,-10.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //