Array 1 72655-71546 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCTT01000008.1 Serratia grimesii NBRC 13537, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 72654 28 100.0 32 ............................ AATCTGGCCACTCTTCCAGGGGCTGGACAATT 72594 28 100.0 32 ............................ TAACATTACGTTACCAAGGGTCTGAGCAGTAG 72534 28 100.0 32 ............................ TGGATGCGTACCGTACTGGCGTCGTGCTGTTC 72474 28 100.0 32 ............................ TCGGCCAGATACGGTGGTATAGAAGCCGACAG 72414 28 100.0 32 ............................ TGGCCCCAATACTGACACTGACAAGCCCAATG 72354 28 100.0 32 ............................ GTGACCCGTCACGATGGGAAGCAGAGCACGGC 72294 28 100.0 32 ............................ CGTATGGCCGTCGGTGACGGTAACGGCACGTT 72234 28 100.0 32 ............................ AGTGCGCGATTGTTCGGGATCATACGCACAGC 72174 28 100.0 32 ............................ TTCCGCGCGCCCGCGTGTACTGACATCACAGC 72114 28 100.0 32 ............................ CAAAACGCGGTAACTGTAGCCGCGTCGCAAAT 72054 28 100.0 32 ............................ CAAATTGTTGGCGCTTGATATCGACAGCATTG 71994 28 100.0 32 ............................ CACGTTGATGATGATCTTTGTGATGCCCTGTT 71934 28 100.0 32 ............................ AGTGCAACCGCTACGCGATGCCACAGAGTCAC 71874 28 100.0 32 ............................ TCACAGTAACCATGCGTATCATGAATGGGGTG 71814 28 100.0 32 ............................ AGACATCAAAAAAATCTGCTGGGTACCAACCA 71754 28 100.0 32 ............................ AATCAGTGCGGTAATTGGATTGCGGCATAACA 71694 28 100.0 32 ............................ TTAGCCAAAGTCGGGCAGTTATGCGGCTTGAT 71634 28 100.0 32 ............................ TGATGATTTCGCCTGGCACCCAGTAAGTAAAT 71574 28 85.7 0 ...........C..C......A...G.. | G [71548] ========== ====== ====== ====== ============================ ================================ ================== 19 28 99.2 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GGCGCTGATGGAACTTCAGGAAAGCGGTTGGCTGAAAGGGTTGCGCGACTATACCGGCGTAGACCCCATTCAGACTGTGCCAGCGGGCGCTCAATACCGAACGGTCAGCCGGGTTCAGGTCAAGAGCAGTGCAGAGCGCCTGCGAAGGAGGTCGGTCAATAAAGGTTGGTTAACTGAGGAACAGGCCAGAGAAAAGATCCCGATGACCAGTGAACAACGCTCTTCACTTGCGTTTATTGCGTTGAAAAGCCTCTCTTCGGGGCAAAGTTTTCGCCTGTTTCTAAAGCAGGGAGCATTGCGGAAAACGCCGGTGGAAGGAAAGTTTAGTTTCTATGGCTTAAGCCCATCAGCCACGGTGCCATGGTTCTGACCCTATATTTTGTGGCAGGGATAACTTATTGATTTTATTATCTCTGCCCCATGCCTGGAAAATTTGGGTTAAAGCATGAAATAACCAATATTTTATTTAATAGTCAGTTTGTTACTGGTTATTTCGTACA # Right flank : GCCTTTCTGGACAAGGATATACAGCAACGTTGGTGGCCAGGGACGGATTATGATGGCATGTTCCCCGTCGTAATCCTATCCCCGACCACCCATGGCTTATTACCGCTAGCCTTTTTTCCCTGCCATTTCAAAACGAGGTGAAACCAGACCGTACAACGTCCAACCGAGGAAGGTGGCAATTGCGCCCCACATCATGGCTTCTTCGCCGGAGCTGTAGAGTGCATAGAAGCTGTAGAGTGCCCCAATACCGGCGATGATATTGGCAATCCGCGCTTTGTTCTCCGGTACTTTTGCCACCTTCTGAATGATGATCAGCGCTGCCATCGACAAGATGTAAGGGATGATATTGGTCACCACAGCCAGATTCACCAACACGTTGAACTGCTTATTCAGCGACGGGCTGATGGTCATCAGAGACAGCACGCTCTGGATCACCACGATGGTCAACATACCTTTAACCGGAGCATCGGCCTTGCTGAGTTTGGAGAAAATTTTCGGGA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 83243-82673 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCTT01000008.1 Serratia grimesii NBRC 13537, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 83242 28 100.0 33 ............................ TGGCGGCAGCGGGGGCAATAGCGAACCTGGCGA 83181 28 100.0 32 ............................ ATTCTGGCCCATACCCCCACTCAATAGGATCG 83121 28 100.0 32 ............................ TACTTAACAGTTACGCCCGCTGGTATTTCTAA 83061 28 100.0 32 ............................ TATTAATATGACGGCCTGATATGTAGCAGTAA 83001 28 100.0 32 ............................ CGGAGTTATCAGCAGGTTTACATCTGCCCAAA 82941 28 100.0 32 ............................ GCACCGGCATAGCCAGCTTGGCGCGGAGTTCT 82881 28 100.0 32 ............................ GACAGGCTGCGCCTCACGGTTAGCCAGGATTT 82821 28 100.0 32 ............................ GGGCGCGCATCAAGGCCGCCAAGGCGCTGGAT 82761 28 100.0 32 ............................ TGCTGCAAGCGTCTGCCCTGGCCGTTGGCCTG 82701 28 85.7 0 ......................A..CGG | C [82675] ========== ====== ====== ====== ============================ ================================= ================== 10 28 98.6 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCAGAGCCGTTTAACCGGCTTTAGCGTTAACGTCCGGCAGTAAATAATCCAATGAAAGAGGCGGGTGGCTCACCAGCCTCTCTTTTTGCGTTTTGCTTAGTTGCTTGACCCGATATTCCAGTCTCAATGCTTTTGAGCGATCCCCCGCCTGACAGTGAAAAGCCAGCACCAGTTGGCCTTTACCCCGTAGCGCCTTGGCCCCTTTGCCCGCCTGATGCTGCGCCAGCCGCCGCGTTACGTCGGTAGTAATGCCGGTATACAGCATGCCGCTGGGCATACGCAACATATACAGGTGCCAGATACTGGTGTTGGTCATATAAGTTCCCGCAAAGAATTGAGCGTTACTATAGTCAACCCGGTCCCATCGCTGAACCCTTTTTTCTGGCCTAATTTAATTCATTGATTTTTAATGTCTTTAATCTGAGGGTGAAAAAAGCCTTTTTGACCAAATAGCGATGTTACTCTTCAACAATCAGCCAATTAGCGCTAATCTTCAACG # Right flank : TGCGGACATCCAACGCGTTGTGGGTCCCAAACAAACGGCCACGTAAACCATGAGAGCAATGAAGATGAAAGCGTGTACGGTGTGGGGAATATTAGTTTTCAACTTGAAAACAACCCCGTCAGGGGCTACAGTGTTTTCAAGATGAATACATAAGCGAGGGATTCGCGGTGCATGTGATCAGTAGACAGCCCTTTAATGAGGCTGCAGGGAAATACCCTAATAGCGCGTTGGCGCTTCTTGATCTGATGAGGGTTCTGGAAAAAAAGACCTTCAACAGCCCGGATGAGATGAAAAGAGCGATCCCGTCACTGGATAACTTCAAGTACCGTAAAAAGTGGTGGGTGATTGATGTGTCCGGGAACACGTTGCGGCTGATGGCCTTCATTGACTTTGAAAAGCAAAAGGTTTTTGTAAAGCACATTGAGACTCATGCCGAATACGACAAGTTAACAAAGTATTATAGGGAGCATAAAGAATGACTGTTGCCACTCATATCGACG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //