Array 1 2703853-2705077 **** Predicted by CRISPRDetect 2.4 *** >NC_014098.1 Kyrpidia tusciae DSM 2912, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 2703853 37 100.0 38 ..................................... CCCAAGCTGCCGAGCTGGAAGAGGTTTTGCGGATGGAG 2703928 37 100.0 38 ..................................... ACCTCGACGCAGCAGGGCCTGTGAAAGGGGTGATGGAT 2704003 37 100.0 36 ..................................... GCCCGAACCGATGGCCGAGATGGAGGAAAAACCGAA 2704076 37 100.0 39 ..................................... GCTCATGACTCGGGATGAATTCGTGCGGGACGTGTTCAT 2704152 37 100.0 38 ..................................... TCAGGATGCGACGCACTTCAAGGTTGCGAGACTTATGC 2704227 37 100.0 39 ..................................... ACGACCAGTGTAGCCGACGCGACGCCGATGGACGTGAAC 2704303 37 100.0 37 ..................................... GGAGATTCAGGGGGTGATCGCCGCTGAACATCGTTCC 2704377 37 100.0 36 ..................................... AACGTCCAAGGCCGTAACGTTGAGCATCTCCTTGGT 2704450 37 100.0 38 ..................................... TCCACCAGCACGTCCGGAGTCGTGAACAGGTACGTCGT 2704525 37 100.0 35 ..................................... GGAATCACTCCTCCCTGCCATTCGGCCATGAGACC 2704597 37 100.0 39 ..................................... GAAATCGGCGTGGCTGGTGCTCCAGTCCACGACCGACAG 2704673 37 100.0 40 ..................................... AGCCGTGCAATCTGTTACTGACTGCACTGATCCAATTGTT 2704750 37 100.0 37 ..................................... CGCAGATGCTGGTCTACAACAAAGCGAAGACGATGCT 2704824 37 100.0 35 ..................................... TCTGCACGAATTGCCTGGCCGGAACGACATGCTAC 2704896 37 100.0 36 ..................................... AGCGGCGTCATCGGTCGACGCCAAAATGTCAGTCAG 2704969 37 100.0 35 ..................................... GGGACAAGGCCACACATCATTCGTCCGAGAACAAA 2705041 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 17 37 100.0 37 CCTTCAACGGGGCCGCGGGGTGAACCCGCGGAGTCAC # Left flank : TCCGTGCTTGAACTCAACCGGGAACGGCACACCGCCCCGAATCTCCACCCGGTCACATCGTCCCGCCAGCCCGTACTGATCGGATCAGACCGCCAGGGCCGTCAACACCTCCACATCTTCCTGAGACCGCTTCCCCTCTTCATCCACGCGCTCATGCCCCCATCTTCCCTTCGCCGTGTAAACATTCTCTTGCCAAGCTTGTTCAACATGGATCAGCGCAAATTGACGGGGACAATAGCTGTAGTGTTGTAAAGCCGACAACGGCACAATATCCTCATCTTCCCACTCCAACCGCCGTCCATGGGAAAATAGTTCCACATGTCACCCCTCCCGCCCCACCGATGAATCTCGTCGATCCTTGCACCTACTATTGTGCACAGAATTCCGTCAGGTTAGACGTGCTCATGGAGTGACAAATGCAATTCTTCTCAAGAAAGGGCTTGCACCGGTCGCCTGACAACGACTTGGGTCGAGCCCGAGATCAACATCGATAAACACGT # Right flank : CTCTTCCTCTCCAAGCCCTTGTACAACAAGGCTTAACGTGCGCTTTTTCGCGAACCTCCCGTTGGACGGGTTTGTACGCGACCAACTCCCACTTCCGAGTTACTCGATACTCCCATCTTATCAAAGAAAACGGGTTATCGCGAACCTCCCGCATTCACGGCATCACTACAGGTTCGCGCAACATCGGGAACCGGTATCATGAGGGGCATTTTCCCGAAAGGCGACAACAACCGGCAATTCGAACCCGGTGTGCTTCATCAAGTCCGCGCTCACCTCCGCAGGTGTTCGCGACTCGCCAGTCCGGCCACCGCAGCCCCTTGCTTCGAATTTCCAAATTGCAGGAAGCTGATCCGCCCCCGGTCAACCTTAAAACCCGGATTCACCGTTGCGGTCCCCTTGCCCGTTCTCAGACGGCACCGGTCGCTCGGGAATAAACAGTCCCAAACCATAGTGACACCCATACCCGAACGCCAACGGTCCCGCCACCGGCTCCGGGAACT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTCAACGGGGCCGCGGGGTGAACCCGCGGAGTCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-16.20,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA // Array 2 2715039-2714102 **** Predicted by CRISPRDetect 2.4 *** >NC_014098.1 Kyrpidia tusciae DSM 2912, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 2715038 37 100.0 36 ..................................... CGCGTCCACCGCCTGCACCGGTCGCACTCGCCCCGC 2714965 37 100.0 39 ..................................... TGTGTGAGCCCCGTCGGAGCGGGCAGGGACGTGCCCCCC 2714889 37 100.0 38 ..................................... CGTCTGCCCCGACCACCGTCGGGTATCCGTACTCGTGC 2714814 37 100.0 37 ..................................... GAACTGACGGTCGCCTGGTGGATGCTGGCATGCACCC 2714740 37 100.0 35 ..................................... GACTTCCACAACCTTGCAGAAGCCGATCCTGGGAC 2714668 37 100.0 35 ..................................... CGGGGGGGTTAGGAATGACATTCCTAAGGGTACGG 2714596 37 97.3 41 ........A............................ TTGTGCTCTTCACGCCTTGCCTGACGGTCCTTATGGCACTG 2714518 37 94.6 37 ........A....................C....... ACTACAGGGGGAATGAACATGGCGCGGATTGCGGCTG 2714444 37 91.9 41 .T..........T.......................C CTGAAACTCCGTTTGGCTCAGACGTCCTGCCGATTGGAGAC 2714366 37 91.9 36 .T.T........T........................ TACGGTGCAAATCGAACTGGACGATGGGCTGGTAGA 2714293 37 94.6 43 .T.................T................. CAGAAGGCATACTCCTGTTCAAGACGTTCTCGATCACTCGGCC 2714213 37 89.2 37 .T......A......A....................C GATGAGCCCGGTGCAGGTATCGGCGGGATGCGGGAAA 2714139 37 94.6 0 .T..................................C | G [2714105] ========== ====== ====== ====== ===================================== =========================================== ================== 13 37 96.5 38 GCAGCTCCGCGGGTTGAACCCGCGGCCCCGTTGAAGG # Left flank : GCCGTGGACAAACGGTCTCGCGCGGACGCGGGTGTCGATCGGGATGCCGTCGTGAATCGGGATCTATAGGTGCCCATCCGTCGGATCGGCAGGCGCCGGGGGTGGGTTCGCAGGGCGGATTTGGCGTAAAATAAGTTTGAATTATGGGTTGGAGCAGGGGCGCGGCGGGGACGTGGACGGCACAGCTCGTTTGCGCAGTGATCATGGTGAATGTTTCGCGAATGACATCCGGAAGAGCCAAAGTTGCCAAGGGTATGCCCGAACCCCTGGGCGGACATCGGCGAAAGCCGTGTGAATTTTTTGGGGACCTTCGATCTGTGTGCGCGAACCTGGAGTGATGTAGAATTCGCCGGGGGGTTCGCGATTCGCGGTTTTTGCCGGTATAATAGGGAATGCGAGGGGCGGAGGCTTTGTAACCGCCCGGCCGAAATCGGGTTCGTTGCGAGGTTCGCGAAACATGTCCCCGAATGCCGCGATTTGCAAGGCGTGACGGGCCAAGA # Right flank : TCGAGGTGATCGGAAGCCCTGGTCGTTTCCCCAACGGTCACGGCTGTGGATGTATAAGCGATCCGGCCGCGATTCGTAGACGTAGTCGACCGCATAGTTGTGCATTCTAACATCCCCGCACATCGAGGTTCTGCCTTGTCGTGTCGATCATCCAAACAGTTTGATTCGGCCGGCGGCCCAAATCCGGTCCGGGATCCTATCTGCCGTGAAGACCGCTAGCATTCGGAGCACGTCCGTTGATTTGCAATCCTATTCCGTACTACGATTGGTCAAGGGAGACCGACATTGTTCAAGGCTGTGGATGTATGGCCGCATCTCAAAGCATCCGCGTGGCGGGTCGACTGCTTGACCTCGTTGCCCTGATCATCAGCCATCCAAAAGAATATACGGCGGCCCGTTAGCAGAGTATTGCCACGTTTCCGTACGCACCATCCGACGGGATATTCGCCTCGTGGAGGACCTGGGTATCCGAGTCGAGTCAGAGCCTGGCGGCGGCTATT # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.77, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGCTCCGCGGGTTGAACCCGCGGCCCCGTTGAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-15.70,-14.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 3 2768078-2750070 **** Predicted by CRISPRDetect 2.4 *** >NC_014098.1 Kyrpidia tusciae DSM 2912, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 2768077 30 100.0 35 .............................. TCGATCTCAAGTACGGAAAGGGGGTGCCTGTCTCC 2768012 30 100.0 35 .............................. TCGGATACCACTATCTCGAAAAAGGCCGTTGTCAG 2767947 30 100.0 36 .............................. GGATTTCCTCGAATCTCTGTGCTGTCGTTTTCGGAT 2767881 30 100.0 39 .............................. TCCGTATAGCCATATCCCATGATATACCCTTTTTGTCCG 2767812 30 100.0 39 .............................. GACCGGCATGACCTTCCGCGTATCCGACTCCATGATCTT 2767743 30 100.0 39 .............................. CGGAACCGGTTGCGGCTGCGGCGGACTCGGCGGTTGAGG 2767674 30 100.0 35 .............................. GGGTTCGCTCAGGTCGTCGGTGCGGATGATACAAA 2767609 30 100.0 36 .............................. CCAGAGGATGCAAAGAAGTCCCTCTACGACTTCATC 2767543 30 100.0 37 .............................. CGGGATCGGGCCAAACCCACTTCGGACTCGGCTTCCG 2767476 30 100.0 39 .............................. CGAAATCCCCCGGGGTGTACTCCCAAAAATTCGTGTACC 2767407 30 100.0 39 .............................. CGAAATCCCCCGGGGTGTACTCCCAAAAATTCGTGTACC 2767338 30 100.0 40 .............................. ACGAAATAAGGATGATGGAAGCCCAAGCGGCAGCAGCCTA 2767268 30 100.0 38 .............................. CGACGGCTTGGGCGGAAGTGCGTCCACCCCGACATTTC 2767200 30 100.0 36 .............................. ACCGATTCAACGGTTTTTCCGGCGGTATCGATTGCT 2767134 30 100.0 38 .............................. TTTGAAAACAGGCCTCATTTTCGTTGCGTCCTTGCGGG 2767066 30 100.0 37 .............................. CGCCTCATGTATTCTGGTGCGGCTCCCCGGTCTCCCG 2766999 30 100.0 40 .............................. CTCTTGGCAGCAGGCGGGGTCATGCTCGCCTGCACCGCCG 2766929 30 100.0 36 .............................. GCGCCGGTGGATACAGTGAGGTCGAAGCCATCCAAA 2766863 30 100.0 37 .............................. CCAGCTGTTTCAGATCGCCCGCATCGAAGAGTCCCGC 2766796 30 100.0 37 .............................. TACACGATGTCCCAACGGTCCATGTTCGGCACCCCCA 2766729 30 100.0 36 .............................. GAAAAAACGCCGGGAAATCCTTCTCAGCGTCTGCGG 2766663 30 100.0 39 .............................. ACGCCACATTTCCAATCTATGTAAGCGGTGGTGTGCCGT 2766594 30 100.0 39 .............................. CTGGCTGCGGCAGAAGATATGATGATCTCATTTTTGGTG 2766525 30 100.0 39 .............................. TCCACTGGTTATCCCCCTCACTGCAGCTCTGTGGGAAGC 2766456 30 100.0 39 .............................. GACGAGACGGACCACCGTGTCGAGCCGATCCGGTGTTCA 2766387 30 96.7 41 ............................G. TCGTCGACTTGGCCAGCTTCGGCATCCCAAAGATGGACACC 2766316 30 100.0 36 .............................. CTCGATGATGGCCTTCCCATCGCGATAGACGAACAC 2766250 30 100.0 38 .............................. CACAAGGTCAAACCGTTATTCACATCTACCCGGCCAGG 2766182 30 100.0 35 .............................. TGCGCCTGAATGCGGAGGTCGGCCACCTCTCTGGA 2766117 30 100.0 38 .............................. TTCGGGGAGTAAGTCGTACCATTCCCGCTCGCTAATGA 2766049 30 100.0 36 .............................. ACCGCATGAAGTTGTATTCTCCACGATAATTACGGA 2765983 30 100.0 40 .............................. TGTTTGACTGCTTGTTCCGACCGGCCCAGCACCGCAGACA 2765913 30 100.0 39 .............................. TCAGCTTCCACAACGTGCAGCCCGCGCCTGCGCAGCTGC 2765844 30 100.0 39 .............................. GAATGTGTGAGTGCCGAATGCGTGGCCGGTCATGAGGCC 2765775 30 100.0 36 .............................. TCGCTGTTTCCTGGCCTGGACCACATGAACCCTGTC 2765709 30 100.0 37 .............................. TTATGCATAACGAACGCGCAACGAACGACGCTACCAT 2765642 30 100.0 40 .............................. ATTTGACAAGCACGGATAAGTTTCGGGTTGACGTTTTCTC 2765572 30 100.0 39 .............................. TGTCTCGGTCGAGTCGAATTCTCGAGAATTTGCGGTGCT 2765503 30 100.0 39 .............................. ACCTCGGTGAGAAACACGTCATCGCGATGGCGCTTCGAA 2765434 30 100.0 38 .............................. ACGAGCTCGTCGCGGCCACAGGAAGGTTTAACCGGGGG 2765366 30 100.0 36 .............................. GTTCCCGACGAGGAAACAGGAATGCAAGAGGTTCAG 2765300 30 100.0 36 .............................. TGCCGGATCGTGGAGGCCATCCGGTTTTCGATCGGC 2765234 30 100.0 37 .............................. AGCGCCAGGATTTCGCCCTTCCGCATCCCCGTCATGA 2765167 30 100.0 38 .............................. CGTCCGTCCACCTCATATCGAACCCACAAGCCGACGGA 2765099 30 100.0 38 .............................. CCGACAAGGCAATGCGTGAGGTATTCGGGAACCCCAAA 2765031 30 100.0 39 .............................. TCGAGGAACCGAAGCCGGATGATCTTCGCTTCATCCTTC 2764962 30 100.0 38 .............................. TGGGATCGACCGAATGATTTCTACGAAGCCGCCCGGAA 2764894 30 100.0 39 .............................. TTCTCCTCGAACAGACGGTCGCGCAGAGCCTTGTATTCG 2764825 30 100.0 36 .............................. TCGTCCGTTTCTCCCAAGAGCTCGGCCCGCAACTTG 2764759 30 100.0 37 .............................. ACCTCCCGCTCGGAGAGATCCGGGCGTGGAAGTGGAT 2764692 30 100.0 39 .............................. CTCTTCCGGAGACGCATCCGGACTGAGCAACGATGGTGG 2764623 30 100.0 39 .............................. AAAACGCACTGAAAGAGAACGCCGGACCGTTCATCGCGA 2764554 30 100.0 41 .............................. CTCGTCACAGCCGGAACAATCGGTGTCCCCCGGCCAGTGCC 2764483 30 100.0 40 .............................. TGGAAGCATACCTCTCGGATCTGCTATGAGGCGCAGAACA 2764413 30 100.0 40 .............................. GTGTGAGGCGGCGGGCCACGTGAGAAAGAACAACACCCTC 2764343 30 100.0 40 .............................. ATGCCCTCCAGACCATGTTCGGCACGGACGCCATTCGGGG 2764273 30 100.0 37 .............................. TTGATGCGGGCCCGCTCGGCCGCGAGGACCTTCCTGT 2764206 30 100.0 35 .............................. TTCTGCGATGACCAATAGTAACAACGGGAGCAAGG 2764141 30 100.0 39 .............................. TAGAAGCGAACCCGCGCCGGAGCACCTCCTGCGCCCATA 2764072 30 100.0 37 .............................. CCTCCTTTGCGCTGTTCTCCAGCGCCTCGATCTCCGC 2764005 30 100.0 42 .............................. TATTCGTCCGCCGGTTCGCCCGTCGGTTTTCCGTCACGGCCC 2763933 30 100.0 39 .............................. ACGCACCTGATGATCGAGGCGAACTACTCCATGGACCTG 2763864 30 100.0 38 .............................. GCGATTGCGCAGAGCAAGTGGGTTTTCCCGGAACCGAC 2763796 30 100.0 39 .............................. CGGAAGCGGCGAGAAAGGTGAAGGAGGAGGCGCTCATCA 2763727 30 100.0 38 .............................. TACAACGCCAGGGCCTCGACGGCCTTGGAACGGGCCTC 2763659 30 100.0 35 .............................. GGATCAGGACCGATGACATCACGGTTTCTGTCCCA 2763594 30 100.0 40 .............................. CCCAATGTGCCCGGCCATGCGGTCATCCAGCACGCGCACG 2763524 30 100.0 36 .............................. ATCTTGATCTCCGGCGGATTGACCGGGACGTGCAGG 2763458 30 100.0 40 .............................. GGGTCACCGATGATGTTCACGTTGTCGAACGTGTCGATCC 2763388 30 100.0 38 .............................. CACTGCCTGTTCCATCTCGGTCTTTGTCCACCGTCGCG 2763320 30 100.0 36 .............................. ACGTATTCGTAGCAATAAAAGAAGGGAATGAACTAT 2763254 30 100.0 38 .............................. TTTAGGAAACAGTCCAATTAAAATACGCACTATCGAAA 2763186 30 100.0 38 .............................. TCGATTCGAGCGATTCAGTACGTCATTGAGACATACGC 2763118 30 100.0 39 .............................. GATTTAATGTGGACGTTGAGCAGGCTAAGGTGCTTGAAG 2763049 30 100.0 37 .............................. TTGCGGGATCGAGATCCCAGTTCTCAGAACTGTTTGG 2762982 30 100.0 35 .............................. CTTAGCGAAAAAGCTGGATAAAGAAGAGAAAAAAG 2762917 30 100.0 39 .............................. TGAAATCAAGGAACGAGAAGAACGGGAAGGGCGCAAGGA 2762848 30 100.0 36 .............................. ATCACTCTGTAGATAGTAAAGATTATCTGATAACGG 2762782 30 100.0 38 .............................. TTCAATAGGGTCATCGGATCCTTTAGGGTTGGGTATAA 2762714 30 100.0 38 .............................. TTAGAAAGCGACGAAACAAGTAAATACCAGAAAAGCAG 2762646 30 100.0 39 .............................. AAGTTGCAACGCAGCCAAACCATACAACATAATCAATCG 2762577 30 100.0 36 .............................. TGGGGCTTCTCAGCTTGTCCACTCTTGGACATCGGG 2762511 30 100.0 41 .............................. TACGCGAAAGCGGCCTCTGTCCGGGCAATGCGACGGGCCCG 2762440 30 100.0 38 .............................. TGCATGGAAGGCAATTCGTGGAAGAAATAAAAAGGCGG 2762372 30 100.0 37 .............................. CCCGGTCAGCCTCGGCCGGGCTGGTCCATCGCCTCTT 2762305 30 100.0 35 .............................. TCCGATTCCTCAGATGTAGAAGGCGGAGGGGGCGG 2762240 30 100.0 39 .............................. CGATGTACACCAGACCGGCCACGGCAAAAACTGCAATGC 2762171 30 100.0 37 .............................. GACACTCAGACTGGCGGCGCCGATATCGGCAGGAGTG 2762104 30 100.0 35 .............................. CACTTGTACGTAGTGGTCATCGCCAGCACATTCGG 2762039 30 100.0 36 .............................. AGCTGGAAATTCAAAAAGCGACTGGTAAACCAGTGT 2761973 30 100.0 39 .............................. TTGCCAGCGGAGGATGGGAAGAGCAAAAGGCCGCCATGG 2761904 30 100.0 41 .............................. TCGGAAGAGCATCAACCTCGGTGGCGGCCATCGCCATGGCG 2761833 30 100.0 35 .............................. AAGTTGTTCCCGCGCGCCCCGGGATATTTTGCATC 2761768 30 100.0 38 .............................. TTCCGACTGACACCAGAGGGAAAGAGCAAACAGAAGTA 2761700 30 100.0 36 .............................. CAGATCATCGCAATCCTTTCGTCTTGTTGGGAATTT 2761634 30 100.0 39 .............................. GTCGCTGGCGGGTCGATTCTGATGATAATCTTGGGCGTC 2761565 30 100.0 39 .............................. CAGTTTTGGCACACCCACGTGCTTTGGGAAAACCGCCGG 2761496 30 100.0 37 .............................. TCATATGCACATTCACGGGCCGCGTTTGTCCAAATCT 2761429 30 100.0 39 .............................. ATCGAGGAAAAAGTCTATAAATACTACGGGATTAGTAAG 2761360 30 100.0 38 .............................. AACTGACTGTGAGCAGGGAGATTCAGCAATGAGTCTCC 2761292 30 100.0 38 .............................. CGAGCCGTGGCTGGCGGCCGATGACAAGCGGCTGCAAC 2761224 30 100.0 36 .............................. ACGGCTTTCCAGTTTATTTCAGGCCGGTCGTTTTTC 2761158 30 100.0 38 .............................. GAGAAAGTGCACGGCAAACCCATCCGCGACATCGTGCT 2761090 30 100.0 35 .............................. CCGCACCAATGTACGAGCCGACCTGTTGCCACAAC 2761025 30 100.0 36 .............................. CTGTTTCACACTCTCAGCGTTGAGGATGAACTTCAG 2760959 30 100.0 35 .............................. ACATGGTGGTCCACAGCGTCCCGTTCCACCCCGGA 2760894 30 100.0 37 .............................. GACGTTGATCGCTTCGAGTTCACGCGCTTTGCGGGCG 2760827 30 100.0 40 .............................. TCACAAATGACAGGCCAGACATGGGGAGGGCTACGGTCGT 2760757 30 100.0 40 .............................. AAGAGGCGTTGGAAGAGTTGGGGGAGGAGGCGTGACGAGT 2760687 30 100.0 37 .............................. TGGAAGCATACCTCTCGGATCTGCTAGGAGGCGCAGA 2760620 30 100.0 39 .............................. ACGCAAAGGGTATAGAAGTTCGACGGGTACGGGTCCGGG 2760551 30 100.0 36 .............................. GGCGTGAGAGGAGGAAAACAATGAGCGCTCTGGTGA 2760485 30 100.0 39 .............................. ATTTCCGGTGGCGGAGTGTGAAGTCTGATTAGGTCTTCG 2760416 30 100.0 39 .............................. TGTTCCGAAAAGAAACGTCGATAAAAGGAACAAAACCTC 2760347 30 100.0 40 .............................. CCGAGAGTACCATCCCGGAGGCTGGTTGGTATATCGTCGG 2760277 30 100.0 36 .............................. ACCGCAGACACACCTTCGATCGCCAACGTCTTCTGG 2760211 30 100.0 37 .............................. TTCTCCGGGTGATGCTGTCCGCAACTCCGCTTTGCCC 2760144 30 100.0 37 .............................. GAGTACAGCCCGGACGGGAACGAGATGTGGTGCGCGG 2760077 30 100.0 38 .............................. CGAGCACATAAACGTTATTATACCGTGTTTATCTGCTG 2760009 30 100.0 40 .............................. CGAATTTCTCACCTGGGGGAATCCCCACTGGTATCGGGAG 2759939 30 100.0 37 .............................. CGACTGGACCTTCGAGGACGTGTGGCATCACATCGCC 2759872 30 100.0 36 .............................. CGTATAATAACCTGTACTATCATGATGGACTATTTA 2759806 30 100.0 36 .............................. CGGATCAGGAGGGTGGTGAGGTGGGAGTGAAAAAGG 2759740 30 100.0 39 .............................. AAACACTCAATTCAACGTCACCTAACCACGTGCTAGAAA 2759671 30 100.0 40 .............................. AACATCTTTCCGCAGCGTCTAGACTGCGATGAACGTGACC 2759601 30 100.0 41 .............................. TAGCAAAGAAAAACGCGGGAAAAACATTCCCGCGTCAACAC 2759530 30 100.0 40 .............................. TCATCTTTCACTGCCACGAATACGCTAGCTGCTTCAGAAA 2759460 30 100.0 39 .............................. GTTGATACGCGCAACCCCGCGCTCAAAGTCGATGTCGCG 2759391 30 100.0 38 .............................. CGTCGGTGTCAGGTTCACGCCTTCACCTCCCTGCACGC 2759323 30 100.0 39 .............................. GCGCTGTTGGAGAGCCAGATGCGCGTGATAGAAACGCTC 2759254 30 100.0 37 .............................. TACAACCCCCGTGCCTGGTCGGATAACCGAATCGGCA 2759187 30 100.0 38 .............................. CCGAGGGTGCAGGACCCGTCGACGGATTTCGCGGACGT 2759119 30 100.0 37 .............................. ACAAAATCGAGCGTGAAGCCAATGAATTCGCTGTAGA 2759052 30 100.0 38 .............................. TGGTGCTCTTCTTTGATGCGCGACCGCCCTTTACTACC 2758984 30 100.0 36 .............................. CCTGTACCTGATGAACTTCCACAAGCACCAGTCCAT 2758918 30 100.0 39 .............................. TCACCACCACCACTACTTAGTTCATTTGTCTTCTCTTCT 2758849 30 100.0 37 .............................. CAGCCGATACTGCTGGCAGGCGAAACCTCCGAAGATG 2758782 30 100.0 35 .............................. GCGGCATGCGACGGGAGCAAGTACAGTCCTGGGAG 2758717 30 100.0 36 .............................. TCGGACATCGATCACGTCGAAGAATGGGACGACGGC 2758651 30 100.0 38 .............................. TGCGGCGGTGAATCGCGTCTTTATGGAGTTGCGTGGTA 2758583 30 100.0 40 .............................. CGTCCCCTGTGTCATGCCGTCTGCCGTTGGTCCTGCCGGT 2758513 30 100.0 38 .............................. GCGGGTCATGCTGAGCTGGATCGACTGCACCACCGTGG 2758445 30 100.0 37 .............................. TCGCCTGTTGAGCCAGCGCATCCTGGTGAAACGGATT 2758378 30 100.0 39 .............................. GCCTCATGGTCCACACTACCCTGACCGGGCCGCGCAAAG 2758309 30 100.0 36 .............................. CGGTCAACTGGACACAAAGTATGCAGGGATCTGATC 2758243 30 100.0 39 .............................. ACACTCAGTGGTACGCCGGGATACTACGGCCCGTGAGGA 2758174 30 100.0 40 .............................. GGAGATATTGGAACACAAATTGGAAATATCGAACAAGGGC 2758104 30 100.0 35 .............................. ATGTGACGAGTTCGAACCAGGTGGTGCAATTCGAC 2758039 30 100.0 35 .............................. CGTCGATGCGCACAGGGATTTTTTCGAGTTCCTTG 2757974 30 100.0 40 .............................. TACTGGGAGGGATCCCCGCATCCAGTGAAGATGGTCAGGC 2757904 30 100.0 40 .............................. ATCGCACCGCCCGTGTCGGCCGCAATCCGCCTCTCGACGT 2757834 30 100.0 36 .............................. TCCATCGTCCGCTCCTCAACCGATCCGCGCCGAACG 2757768 30 100.0 36 .............................. ACCATTCGCCCATCGTGGAACAGCAGGAACACGCCT 2757702 30 100.0 39 .............................. CGTGATCGAGCCGAACGGCGTGATCAGGCCGCTCAGGTG 2757633 30 100.0 37 .............................. ATTCAAGATCAGCACACATGACTCGGTGCGGCCCTGC 2757566 30 100.0 37 .............................. CCGCTCTCTTGTGCCATCTGCCCCTTCAGCCAATCGA 2757499 30 100.0 38 .............................. CGGGGCGAACCGGACAGGAAGGTGGTGTTTGGCTGAAG 2757431 30 100.0 37 .............................. AATCGCTTTCGCAGCGAAATCGAATCCGGCCAGTACA 2757364 30 100.0 38 .............................. TCCGACCACACCGACGCTCCGCTGGCGCCGGTTCCTCG 2757296 30 100.0 38 .............................. CGGGGCGAACCGGACAGGAAGGTGGTGTTTGGCTGAAG 2757228 30 100.0 36 .............................. GAAACTCGCCTACCAGCAGGGTTGGGCGACAAAGGA 2757162 30 100.0 38 .............................. ATGACACCCTGTAGCCAGTCGGTTTGGATGGGATCGCC 2757094 30 100.0 41 .............................. ACGTTGAATCGGAGATGTTGGCGGCCGCCATCCCTGGCGCC 2757023 30 100.0 39 .............................. TTCTGGTTGGCCAGCCAGAAGACAGGCCGACCAAGATGG 2756954 30 100.0 39 .............................. TCGGCATCCAAGGCGGCGGACATTCTGGCCGGGACCGCG 2756885 30 100.0 38 .............................. GCCGAATAGGTCGGAGAGGTGGCGTCCGCGTGGACGTG 2756817 30 100.0 40 .............................. GCGTAATGAGATCGTGCGAGCGATTGCAGAGTTGATCGGC 2756747 30 100.0 36 .............................. ATGTGAAATTCTCGTGGTCTTTGAGCGCGGTTCGGG 2756681 30 100.0 39 .............................. TGCTCTCTTCCCGCTCCCACCTGCTCCACGAATAGGTGT 2756612 30 100.0 39 .............................. CAGAGTCCGCGCTGGAGCAGGCGGCGAAGGCGCATGAGA 2756543 30 100.0 39 .............................. TTCAGGCGATCCGGGAGAGTGGTGGCGCATGACCTACCA 2756474 30 100.0 35 .............................. CTGGCCGCCGATCCCTACGCCTATGGCGCCCTCGA 2756409 30 100.0 35 .............................. ACATGTTATCCCCTCCTCAGTCGATTTGATAGCGG 2756344 30 100.0 37 .............................. GTCAACCTATCGCCTCCCTTCACGCCGCCGGTTCCGG 2756277 30 100.0 37 .............................. CCCGACTGGACAGACATGGGCAGACACCGGCGAAATC 2756210 30 100.0 38 .............................. CTTAATATCATGTTGCAACCCAGCAGCCATCGCATGGA 2756142 30 100.0 37 .............................. ATCTCGATGACCTGCTTTTCCGGCCCCCAGCTGAGCG 2756075 30 100.0 39 .............................. CTCGTGGCGTTCAGGAAGTAATGTCCGGCGTATGCGGGG 2756006 30 100.0 37 .............................. ATCCCCCGGGACGCATTCTTCCGCTGGTACGAGGAAG 2755939 30 100.0 38 .............................. ACACCCCCCTCGCCGTATATTATACACGATGAACCGAA 2755871 30 100.0 40 .............................. CTGCGTGACCGCGTGAAGCAGTACATCTCCGCTCATCTGG 2755801 30 100.0 39 .............................. CGAACGTCATCCGGATCACGCAAAGAAACTTGTCTGTCC 2755732 30 100.0 40 .............................. CCGGGTGCACGAGAATCTCGCATGGCCACTCCCGGGGATG 2755662 30 100.0 40 .............................. ATTGGTCATACGTAATTTCCAACTGCCCAGCCAATTTCCG 2755592 30 100.0 38 .............................. AGGGCCGAGTGGCGGGAAGTGAACGGGCGAAAACTCGA 2755524 30 100.0 37 .............................. CCGGGTGTCCGACGGTAGCACCGCGCTCCTGCTGGAG 2755457 30 100.0 38 .............................. GAGCGCGATTTCGTCGAGACTCTGCTGGCCGCCTGGAG 2755389 30 100.0 40 .............................. CGCCCGCCAGCCAGAAGGCGCTGGCTCGTGTGTGAGAAGG 2755319 30 100.0 36 .............................. CCTTCTGGAACGACCTCAGCCTCTGAGCCGCACGTC 2755253 30 100.0 37 .............................. ATGATCAGGACTGGCGCGGGTTTGCCTTTTCGCTCTG 2755186 30 100.0 40 .............................. TCGTCTTTTACCTCGCGAATCCTGGCATCCGTCTTCGCAT 2755116 30 100.0 40 .............................. TGCCTGTATGCGAATCCGTCGTATCCGGGCGGCACATCCC 2755046 30 93.3 39 ...........AG................. CTGGGACGGGGAGTGGGTATATATGCGGGGTTTCATCCC 2754977 30 100.0 39 .............................. GGAGCGGAAAGGGCGAGGGTATGAGATCGAAGCAGGGGT 2754908 30 100.0 38 .............................. CGGGTTTGGTTTCCTCATCTTCCTTGCGCCCACGCTTT 2754840 30 100.0 40 .............................. TTGACGATGCAAGAACCGCTGATTCTCCGCTCCATCCTGC 2754770 30 100.0 40 .............................. TGCGTGGAAATCGGTTAGGACTTCGATCGGGCACCACTCA 2754700 30 100.0 40 .............................. ACCGCAGAGGCGGTTGTTGACGATGCAAGACCCGCTGATT 2754630 30 100.0 38 .............................. ATGAGCACCGTACGCAGACCGGCGAGATCTTCGTCGCC 2754562 30 100.0 38 .............................. AGCTCCGCTTCAACCTTTTTCCCGTCCTCAGTCATTGA 2754494 30 100.0 39 .............................. TGCGTATCACGGCGGACTTTGCCGCCGATCCGAACCATT 2754425 30 100.0 37 .............................. CCAGTAAATGTTACAAGGTGGGTGGTCTGTATATAGG 2754358 30 100.0 36 .............................. CCCCTCCAGCCACAGGAAGGACGGGTCTGGTTTGAA 2754292 30 100.0 35 .............................. ACGTCGTCAGTCGATGGTTGCAACGGAAGGACGAA 2754227 30 100.0 38 .............................. ATCGTCTGCCGGGACGACGGACGCCCCATGCCAGCCCG 2754159 30 100.0 37 .............................. TTCATGGCGGTGACACGTTCCGCCGACATCAATCACA 2754092 30 100.0 37 .............................. CTCGGCCTGCCTCATCAGCGCCGGGAGGCCATCCCCG 2754025 30 100.0 40 .............................. GCCACTCACCACCACCTCCATGTCCACATCTTCGTAGCGA 2753955 30 100.0 38 .............................. TTTCCGCCGCCTGGAACGCGATCGTAAGCAACATCCAA 2753887 30 100.0 36 .............................. CTGGCTGGTGGTTTGCCAAGCTGGCGATCAAAACAA 2753821 30 100.0 39 .............................. GCGATCCGAGCGACATAGAGGAAGCGATCATGCGGACGC 2753752 30 100.0 38 .............................. CCGTCGAAGTGAATGGCTCATCGCAAGACGTATTGGTC 2753684 30 100.0 39 .............................. GATGGAGTACGCTTATGGGACCTGCTCATCCTGTTTAGC 2753615 30 100.0 37 .............................. CCCGCTCCAGCCGTTGTACCTGACTGGATGCTTTTGA 2753548 30 100.0 38 .............................. ATGAGCTGCAAGCGAAATATCGGGCGAGGGTTTACCTT 2753480 30 100.0 37 .............................. CGGAATTGTCAGTCATAGAATTCGCTGGAGGCCCTCA 2753413 30 100.0 35 .............................. CGGGCTGCGTCCGCGCCGTTGGTGATCGACGACGG 2753348 30 100.0 39 .............................. GAGTGCGTAGGCCATATCGGTGATCTCCCCGGCACTAGC 2753279 30 100.0 37 .............................. CGCTCGGGAATGACATGACGCTGCCCGGAACGAGCGC 2753212 30 100.0 40 .............................. TCATGCTGGCCGAGCTGGACCCGGCGAACCCCTACGGCCG 2753142 30 100.0 36 .............................. GACAAGGTATGCGATAATTTAGGTATCCGGGTGTTG 2753076 30 100.0 37 .............................. TATCGATCTGGTGGCGTTGAAATTCAACCAGCGCCAG 2753009 30 100.0 40 .............................. GAGGTCGAAACCAGACACCTTTGGTGCATGGGTGGGAGCG 2752939 30 100.0 40 .............................. AGTTTGAGGACCCAGTGCCGGCTAACAAAGAATTCCGGCT 2752869 30 100.0 36 .............................. CCGCCCGGGCCACCGTGGTGATGACGATCACCCCCG 2752803 30 100.0 38 .............................. ACCGCTGGTGCCCGCCGACAAGGTTCCTGGTCCGCTCA 2752735 30 100.0 35 .............................. TCGATCAAGAACCCACCCAGGTGAAGATCCGTCGG 2752670 30 100.0 40 .............................. CCATCAGTACCAGGACACAGGACCGCGATGAGGACATCCT 2752600 30 100.0 35 .............................. TCCAGGTAAGGGGTCAAAGAAGATTAGCCCGACTC 2752535 30 100.0 38 .............................. TGACGTGGTCAACCCGCGAGTAGTCCAGTGGATGGAAA 2752467 30 100.0 37 .............................. GGCGTCGACGTGGCTCGTTATGGTGACGACAGGACGG 2752400 30 100.0 39 .............................. TCAGGCCATGGTAGAAGGAGCCCTGGACGCGATAGTGGG 2752331 30 100.0 36 .............................. CTCTATGCCCTCTTTGGGGCCAGCAGGACAGGCAAC 2752265 30 100.0 35 .............................. CTGGGTGGTTGAGACACCGGCATTGAACCGGCCTT 2752200 30 100.0 39 .............................. CCCCGCAACAGGCTTATGTTCCGAGGGATGAAGGCGGCG 2752131 30 100.0 41 .............................. CCAAGGCCATCACCTTGGCGAAGCGGGCCAGCCGGATGCCG 2752060 30 100.0 36 .............................. AGAAAAACAAATCGGTCATACTCCGTGGCGTTGCGG 2751994 30 100.0 40 .............................. AGGCTCTCAATAGCGGCGAATTTGTGTTCGTCTATCGCGA 2751924 30 100.0 36 .............................. AACGTCCACTTCCAGCCGCTCTCTCAGCGTTTCATT 2751858 30 100.0 36 .............................. CTCTTACACGTTACAATGTGTATGTGCTACATTGTT 2751792 30 100.0 36 .............................. CCCAATCCGGATCGTCCTCATCCTCTTCCTCGCCGT 2751726 30 100.0 37 .............................. CGAGTTCATCCCGAGTGGCGTCCGGATATTTTTCATG 2751659 30 100.0 40 .............................. CCGAGACCGTGAGAAAATGAGGCGATACCGGAAAGAGCGG 2751589 30 100.0 39 .............................. TTTTTTCCCGTCCGGCCCGTCGATCAGGTTGAACAGGCA 2751520 30 100.0 38 .............................. GTTATCTCGGATGAAGGTTCTCAAGTTCCTGTTGATGC 2751452 30 100.0 37 .............................. CCTGGCCGATGCCGCCGACCGGAAGCGAGTGGCGGAC 2751385 30 100.0 39 .............................. CAGAGGAGTAATGACGGTGATGAGAACGACGGCCCGCTC 2751316 30 100.0 39 .............................. CAGAGGAGTAATGACGGTGATGAGAACGACGGCCCGCTC 2751247 30 100.0 39 .............................. TCCGGATCAAAGTACCGCTCACGGTAGTGCGTGATCCGC 2751178 30 100.0 36 .............................. GTTCGCCGTCCGGACGGTAGTCTTGTCATTTAACAC 2751112 30 100.0 37 .............................. CGGAGCGCGGGACTCGCCAGAGACATCTCCTTCGCCG 2751045 30 100.0 35 .............................. TACGAGGAGGTGATGCCCATGCCAGGCGCTGAACT 2750980 30 100.0 38 .............................. CGGTGGGCGTCGGAGCCGTCGGGACGGCAGCGGCCGGC 2750912 30 100.0 39 .............................. TTCGTTCATGCTCATGTCCGTGCCCCCCGAAGTTTAGTC 2750843 30 100.0 39 .............................. ATCTCTCTTCACTACGATCGGCTTGAGGGCTTCCTCTGC 2750774 30 100.0 38 .............................. CAAGCTGTTGGTTGGCATAAAGGGTCCCTCCCCATATA 2750706 30 100.0 38 .............................. TTTTTGCATTCATCCCGCTTTCCTTACTCGGAATTAAA 2750638 30 100.0 38 .............................. TCGCTGGACCGGGTGGTGCCGGTATGAGGGCCGGCCAA 2750570 30 100.0 38 .............................. AAAGGCGACTAAAACACAATGAAAGAGGGTTGATCAGA 2750502 30 100.0 39 .............................. CCGCCGGGCCGGACGGTTTGAGGGGGTGAATCGAAACCA 2750433 30 100.0 37 .............................. TCCGAAATGAGCACGTCGGTTCCCGATTTCCGGACAA 2750366 30 100.0 38 .............................. AGCAGACCCGAACTGTATTTCGTCTGGAAGACGGGCGG 2750298 30 100.0 35 .............................. ATAACAGATCAGGAGGTTGAGAAAAAAGATGAAAG 2750233 30 100.0 37 .............................. TGGGATGGGCACAACCTCGGTGTCATGCGGGTGATCC 2750166 30 100.0 37 .............................. TCTTCCTCCACAAAATCCTGCACCGGCAACCCGTAGA 2750099 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================== ================== 266 30 100.0 38 GTTCGTAGCGTGCCTATGAGGAATGGAAAC # Left flank : TTCCACAGCAGTACCAAACGGTCCGCAAGGAGGGGAAGAAATCTCCCGAGAAAGACTTGCTGATCCCATTGTCCCACAGGCAGGCCGGGCTGTCGAAATCTCCACCGACCAAACACGTTGGGGCTTCCCCCGACTGGAGGTGGAGAGATATGGAATTATCAAGGAACAAAGGCATGACAAAGAAACGGAGTGACGGTTGTGCAACTCCAAGACCAAACGCGATGGATTCAATAACCAACGGCGATGGGAACTTCCCCATCCAGATGATCCACAAACATGGCCAGACCAAGACACGCCGACAACCGACCTACACCAACAGATGTGGATGGGGAAGCCCACCACCTCCACCCCTATGAGCAGCTGTCTCATAGGGATGGATAAAAGAGCCGGCTCTGGAAGTTCTCCAGCGCTGCTCCAGCAGTTCCGGACCTACTGGAAATTCAACGAAGAAGACCTTCTACTACTATCATACGAGGAGGACAGTGACATGAAAGACCTGT # Right flank : TAGAGTTTTTGCGTCAGGTGTTGATATACACTGAAAATGGACCCCGGATCGTCAGTGAAAATTGACCCCCACCACATAGACTGGTACGCTCCTACTAATCTGAGTGGGAGCGGAGGAGAAAGGGTCTCGTTCGCCGCATCCGCTGGGGGGGTCGTGCCTATCTCCGCGATTGCCTGGTGTTCCAAAATCGCAACAAATGCTCCTTGACGACCGGCATGTGCTCCCGGAGCCACGTCTCAAAATACGCCGGAGAATGGGTATCGCCGCAATGGCTGAGGTCGTTGCGCAATTTGCGCACTTCATCGAAATCATTGAGGAGACCCGTGTGGCGCGACAACGTAAATGCCAAATCCCTGTCTCGGGGATACGTCATATTCTCCAGCGGCTTCCGGTTGCGGGGGTTGGCCGCCAACTTTTGCGCGACGGTGACCAATTCTTCGATGCGATCCCGTTCTTCTTTACCCTGCACCGGCAAGCCGAATGCCAGTCCAACGGCGGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTAGCGTGCCTATGAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTGTAGGGTGCCTATGAGGAATCGAAAC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 2778651-2770187 **** Predicted by CRISPRDetect 2.4 *** >NC_014098.1 Kyrpidia tusciae DSM 2912, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 2778650 30 100.0 35 .............................. TCCGCGAATCCCCGGACGTCCGCTACGTCGACGAA 2778585 30 100.0 36 .............................. TTCTTCAATCATGGTCAATATCATCCAAATCCCTCC 2778519 30 100.0 37 .............................. CAAACCTCGTCGACCGCGCTCTCGGTGACTCGCATGT 2778452 30 100.0 39 .............................. TGGTGGCGATGGCGTTCCAGGTCTGTACCAGGAAGGCGC 2778383 30 100.0 38 .............................. GTCGAGCAACGTGGCCACCCGTTCATCCTGCAGTGCCA 2778315 30 100.0 35 .............................. CGAGTTCGTGGAGGACTGATGGGGTGGGGCACGTG 2778250 30 100.0 34 .............................. TTCGAAGACGACGCGATCCGGCGTGGTCCCCATC 2778186 30 100.0 38 .............................. CCAGCGATATGATTGAGAACATGATTAAATACGCAGGG 2778118 30 100.0 36 .............................. GATGGACTCCCTGCGACAGCAGGAGTGACGCATGGG 2778052 30 100.0 37 .............................. ACACTGTGTTCGGGCCCGGAGAGATGACAGATTCCAC 2777985 30 100.0 36 .............................. CCCGGCTGGCCCGGGGTATGCAGAAGACTTATCAAA 2777919 30 100.0 37 .............................. CTATCCAAAAATCATAATCGGTCAATGACGATAGATA 2777852 30 100.0 41 .............................. GCCGTGACGGGGGACCCGGATTTGGTTCTTGTGCCGGACTC 2777781 30 100.0 38 .............................. GCCTCATGGTCCACACTACCCTGACCGGGCCGCGCAAA 2777713 30 100.0 35 .............................. CCATTCCGGCGTGCCTGGTTTCATGGTCGTAAAAA 2777648 30 100.0 38 .............................. ACGAGGTAGACGAAAAAGAGTGTTCGAAGGGTTGCCGA 2777580 30 100.0 38 .............................. GAGATGTACTCGCCGTGCGGCCCTTGGACCATCGTTAG 2777512 30 100.0 37 .............................. TCCAGGACCATCGCCAAATCCGAAAGGTCCACATATG 2777445 30 100.0 35 .............................. TCAACCCTGTCGCAGAACTCCTCCATCTTCTTCCG 2777380 30 100.0 37 .............................. TCGACTTGTGGCGATTGGCGAGGTTTGCCGAGTATGC 2777313 30 100.0 37 .............................. CTTGTTGGACGGCGGGGAACGGCTCGGTAAGACGATT 2777246 30 100.0 35 .............................. GGTTGACCCACGATGTGACGAAAACATTTCAGGGG 2777181 30 100.0 38 .............................. AAGTATAATCAGAAAGAGCGAAGGAGGAGTCAAGATGG 2777113 30 100.0 40 .............................. CGGGTGACGGGTGGTGAAATCTTTTCGAGCTACATCTCCA 2777043 30 100.0 38 .............................. TTATATGTTCCGTTTGACACATTTGTCAATGTCCCGGA 2776975 30 100.0 37 .............................. ATAATTCACTTGCCGTCAACCCGATATTCGTTTCAAC 2776908 30 100.0 39 .............................. TTTGGCAATGTATAGATCCCAGCCCCTGCTGCTTGTACT 2776839 30 100.0 37 .............................. CTGCCATGACCCGGGCGAAGATCGCCACGATGCTGAA 2776772 30 100.0 38 .............................. AGCGATAAAAATGGAGTTGCCGGATTCCCGTTTTTATC 2776704 30 100.0 35 .............................. GGAGATATTGGGACACAAATTGGAAATATTGAACA 2776639 30 100.0 39 .............................. AAGGGGGGGATGCTGAACCCGGGCTGGTCGAACCCAAGA 2776570 30 100.0 38 .............................. TTGGTCAGGACCGCGGCGCTACCGGCGTCAATCGTGGA 2776502 30 100.0 37 .............................. GCCGTATCAGAGATATTGCATCAACCGGCTTTTAACA 2776435 30 100.0 37 .............................. CCGTCCGCAACGGCAAACGTTCCCTTTCTCTACAAAA 2776368 30 100.0 38 .............................. TTTTCTTCGATCTGGCTATCAGATCAGACCGAGTTGAA 2776300 30 100.0 39 .............................. TTGTCCAGCGCGACAGCCTGGTATTGGTCCGCAGACAGG 2776231 30 100.0 37 .............................. ACCGGGACCCCGGCGCCAAATGGGCTTTTGGATTTGT 2776164 30 100.0 38 .............................. CTAGTCTGGAGGTGGCAACTGCTCCATGGCCTGAATCC 2776096 30 100.0 40 .............................. GGGACAACCTGGACCCGTCGAAGCGAAGCAAGTACAACGA 2776026 30 100.0 37 .............................. TGGCGGAAGCCTGGAACATGAGTCCAGGACTGGCGTG 2775959 30 100.0 37 .............................. CTCGTCGTACCATGCGGTGTATTGATCGTGTTCGATG 2775892 30 100.0 37 .............................. CGTACTTCGACAAATACGGGGTCTTTCACATCGTTTC 2775825 30 100.0 38 .............................. GAAGAGGCGGCGGTGAAAGTCGAGGCCCACAAACGAAG 2775757 30 100.0 35 .............................. CTCGCAGCCTCGTCAGCGGCCTTCAGGACAGACTC 2775692 30 100.0 35 .............................. TTTCTTTTGGCACTACTGTTTAACAATTTTGCGAA 2775627 30 100.0 39 .............................. GCGCAACGGAGCAACATCAGTCGCTCCGCCACGCATATG 2775558 30 100.0 38 .............................. ACGTGCATGACTTCAACGCCCGCTAGATTGGCGGCCAT 2775490 30 100.0 38 .............................. ACGGAGTACATCGACCTGCTCGGGCACTCCATCGACAG 2775422 30 100.0 38 .............................. CAGTTGCGCTCTGATCCGTTGCCGACGGCTGTGTTTTC 2775354 30 100.0 37 .............................. GCGTGAGTGTGATCTGCTTCCATAGGCCACCCGTCTC 2775287 30 100.0 38 .............................. TGCTCTCCACACATCCTTTTGGCGGCCTCATAGTCCTT 2775219 30 100.0 35 .............................. TAATGTACTCACCGAGTTCCTTTAGGTCCGGCATC 2775154 30 100.0 40 .............................. TGAGCTAGCCGTTTGTAGAGATCGTAACAACAACAGCCTA 2775084 30 100.0 39 .............................. ACAGGGCCATTGGAAAGGCACTGAGAAAGGATGAAGCGA 2775015 30 100.0 39 .............................. CGCCAGGAGAGGACCAGAACCAAGCATTGCTCTCGTGGT 2774946 30 100.0 37 .............................. GAAGAAGTAGTGATCCCTCCTCCGCCGCCCCCAACAA 2774879 30 100.0 38 .............................. CTGCAAGTCCTCCAATTCCAAACATAAGCGGCTTTGCT 2774811 30 100.0 38 .............................. CTCCCCAAGAAATACGGCAATCATCATCGATACCGCAG 2774743 30 100.0 37 .............................. AGGTGATAATGCGGCGCGTGGGTGATCCACAGGACCG 2774676 30 100.0 35 .............................. CGCCCCAAGAAATGCGCGTTTGGCAGGCCGTCAAG 2774611 30 100.0 40 .............................. CAAACGGCTAGCTCATAAATCGCAATCCGCAGTTCTTCGA 2774541 30 100.0 39 .............................. ACCTAACCAAACCTAACCTAACCAAACCAGAAAAACATC 2774472 30 100.0 39 .............................. CGGGAGAACCCCGGAGCGGCGTGGGGAGTGCGGACAGGG 2774403 30 100.0 37 .............................. TTCAACGAAGGCATCCCCAGCGGGCTTGGTCATCTGC 2774336 30 100.0 38 .............................. GACGTTCTCGGGTGGCAATTTCAGCAGGCCGGGCAATA 2774268 30 100.0 35 .............................. TGGCATGGTGGGTGCATCGCAATGGATAAATTGAA 2774203 30 100.0 38 .............................. AACTGTCGAACTAATCTTGCTATTACAACTTTGAAGCG 2774135 30 100.0 39 .............................. TGGATCGTAGTATATCGTGGATAGCTCATACTCCCTTGG 2774066 30 100.0 38 .............................. ATAAGGGAGGCTTGAAACATGCGAGGTGATATTTTCCA 2773998 30 100.0 38 .............................. TCCGTCATGTGGCATGTACTTCACGCGCCGATTCCCGG 2773930 30 100.0 40 .............................. CCAGGGACGGACGGTGGGTATCCGTCGGGCGGTATGAAGT 2773860 30 100.0 37 .............................. TCATCGTACCGGCCCATCGTGAAATCTGACTCAGTGT 2773793 30 100.0 38 .............................. AAGTATAATCAGAAAGAGCGAAGGAGGAATCAAGATGG 2773725 30 100.0 35 .............................. AGCCGTATAATGCCCAGAGTCCCAAGGGCTGGCAA 2773660 30 100.0 38 .............................. CGGTTTGGACGGTCGAGCCATGCGCTGGCCCAGGATTT 2773592 30 100.0 39 .............................. TTGGTAACCACTGGTATCAGGGGCCGAAGCGGTCGACGC 2773523 30 100.0 40 .............................. TCAAACCAAACCAAAGCCGCGCCGGTTTCGGGAAAGTCTC 2773453 30 100.0 39 .............................. TTTGGCAATGTATAGACCCCAGCCCCTGCTGCTTGTACT 2773384 30 100.0 37 .............................. TCAGTCTGTTGGACCTCGGTCAATTCATGGACCAGGC 2773317 30 100.0 39 .............................. TCCCTCAGCCATGTGCCTACTTCCCGACCCTTGTACGGT 2773248 30 100.0 38 .............................. GTGGATCAAGGCTCTGGCATAACTCGGCAGACTGTCGA 2773180 30 100.0 36 .............................. TCTGAAGATCAATCAATTTTTCCCACCGATCTTCTT 2773114 30 100.0 37 .............................. TTGAAAACTCGCCATCTGCTGTTGACTTTGCTGCTGA 2773047 30 100.0 38 .............................. ATGGGCGGCGTCTCGTCCACCACACTTTCAGGTTCCGG 2772979 30 100.0 38 .............................. AAGTATAGTCAGAAAGAGCGAAGGAGGAGTCAAGATGG 2772911 30 100.0 39 .............................. TTGTGCATCCCTTGGGTCCATTTTCGGTCTCCCTCCTTG 2772842 30 100.0 39 .............................. GCTGTTGGTGTGCACCGAAGCCGTGTCATGGAGATGTGT 2772773 30 100.0 36 .............................. TAACCGTCGTGGATCGGGTTCGGACCGCCCGCCATG 2772707 30 100.0 40 .............................. TCGTGCGCAAGACGTTCAACGCGCACAAGGACTCAACCTA 2772637 30 100.0 35 .............................. ACGGATCAGCCCGGCAGACAATCCCCACTTTTTCT 2772572 30 100.0 37 .............................. AAGTCGATGTTCCGCACGAGTACGGATACCCGACGGT 2772505 30 100.0 35 .............................. GCAATCTGTCGGTTCCCAAAAAATGGCCCCATCAG 2772440 30 100.0 38 .............................. ACGGAGGCCCAGAGCTACGCGCAGGAACTCATAGAGGA 2772372 30 100.0 38 .............................. GAGTATACCAAGGGGGTTTCAGGGGATGAGACGATACG 2772304 30 100.0 35 .............................. CAGCGATGAAGGCGAGGTTGCTTCGGAGCCACATG 2772239 30 100.0 39 .............................. CTGTTGTAGTTCGTTAATCGCCTCGATCCGCTCCTCTTC 2772170 30 100.0 38 .............................. TTTCCATATGCCACGAAGTAGCACTGCTTTTTCGCGGG 2772102 30 100.0 38 .............................. TGCGGTCTTTGCGGCCGTCGTCCTTCACCCTGTCGACC 2772034 30 100.0 39 .............................. TTGGCTGGGGAACTCTCGGCATTGGCTGATCATGTTCTT 2771965 30 100.0 39 .............................. CCGTCACCAGGACGTTGTGTTGCGTTTCGGTGATAATGA 2771896 30 100.0 35 .............................. ATCGGGCACTGGGCGGTGGCCGGATGCACCCTCTC 2771831 30 100.0 37 .............................. GTACCATCCACCTGGTTTCCAGCGACCACTTTCGCGC 2771764 30 100.0 37 .............................. CATTTGTGGTATTGGCCGCCGCGATTGTGGCCGTGGC 2771697 30 100.0 39 .............................. TGTCGACCAAACCCGAACCGTCTTCCGGTTGGCTGACGG 2771628 30 100.0 38 .............................. CTAATGATTGGGCTGTGGTAGAAGATGAAACTTGAAAT 2771560 30 100.0 39 .............................. TCAAACCAAACCAAAGCCGCGCCGGTTTCGGGAAAGTCT 2771491 30 100.0 38 .............................. TCCAGTACATGGGACGGTCATAACCTGGGCGTCATGCG 2771423 30 100.0 36 .............................. TCCTTCACCCCCTACAGTTTTTGCCATATTGACCAA 2771357 30 100.0 37 .............................. AACATCAAATGGCAGTAAGGCGGCGATGCCTATGGAC 2771290 30 100.0 40 .............................. ATGGCACCAGCTGGTACGTTTCCTGCCTTCCCGGGATCGG 2771220 30 100.0 37 .............................. CCCGCCGGTACGCCTCGACGGCTGCGTCGGCAATGCG 2771153 30 100.0 37 .............................. CCCGCCGGTACGCCTCGACGGCTGCGTCGGCAATGCG 2771086 30 100.0 37 .............................. ACCGCCGCAACAATCGAAGGCGTCTTGGCCGTGACAA 2771019 30 100.0 35 .............................. CGTCAAGCGCCATTGGTCAATCCACCTCCCCTCAC 2770954 30 100.0 39 .............................. GAGTCGGCCAGGCGGTACGCAAGGATCTTCTTCGCTCCG 2770885 30 100.0 36 .............................. TCGGCCAGAGTCTGGGTTGCGAAATCGGACGCCTCC 2770819 30 100.0 36 .............................. TTCTCGTCGGCCAGCCAGAAAACCGGCTGGCCGAGA 2770753 30 100.0 37 .............................. ACGGTCGAAAAAGCGCTTCTTGATCCAATGCTTCTCG 2770686 30 100.0 37 .............................. TTGAAGTTCCTCTACTTCTGTATCGTGGACGTGACCG 2770619 30 100.0 40 .............................. AGTTTTTCTGCCTCATACGCTCTCTGCTGCGAGTCCACTC 2770549 30 100.0 37 .............................. GTACCATCCACCTGGTTTCCAGCGACCACTTTCGCGC 2770482 30 100.0 36 .............................. CCGTCAGATCGACCCGAACACCGGGCAAGAAATGGG 2770416 30 100.0 38 .............................. CTGGAACGGGACTGCCTCGGCGTTTGGCGTGTTATATT 2770348 30 100.0 36 .............................. GCGCGGGAATTGGTTCTGTGATTCCTGGCGTCGGGA 2770282 30 100.0 36 .............................. AAGGGAGGGACCGCGAAGTGACCGAGTTCGACTTCT 2770216 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 126 30 100.0 37 GTTCGTAGCGTGCCTATGAGGAATGGAAAC # Left flank : TGATTATTTATATTTTAAGAACGACGACCTATTCGGAAAGGCAGATTATGGGGGTTGAGAAGGGGAAGTTTGATCAGATTTTGTGATGGCGGGTGAGGTCGGGGGATTTGGTCCTAGGGATGACGGGGGGCTGGCGAAGAAGACGTGTGGATTGGGGAGCCTGGGCTGTGGTCCGGCTCCTTCTTTTGTAGCCCAGCGCTGGTTCCCCAACCTCAACCCGCGGGATGGAAGGTAATGAGCGATCGAATTTAGCCAAAAATTCTGATCCTAACAGCCCCGCTTCTTGCCTAGGGCGCTTTGGCGATTCCTGTTTATGGAAATGTCGTCGATCGGAGATCGAACAAAAAACCCGGGGGATCGACGACAAGAGACGGCTTGTTCAAAGTCACCAGAATTCGCGTCATCTGAAACAAAAACTCCGTTTCAGGAGTTGATGCACTTCTCCGCACATTGTATGCTAGTAGCAAGAGGCCCTTCGTATAGCGCGGGGAAAATGGGGG # Right flank : CACAAACTGAAAGCCCAGTGGTGAAATGTCAAGGGGGTGGTCGAAGAAAATTGGGAATGGATGTGGGAAATAGTTACAAATGCGAAGGTTAAAGGGCGACCTTAACCAAACCCATGATGTTCGCCGAATTTTCGAGCGATGTTCATGGGTGCAAAACTGGAAAATCCGTGCGTCTGGAGGTAGCGGTTATCTCCTCCTCTCCGGGGGTGTGTACAGCTGATTGGTGCTCAGTAGTGTGAACACCAAGCGTACCAGTTTTCTTGCAGTCAGGACGAGGGCTCTTTTATGTTGGTGCTTCAGCGCTTCGTCGTGCTTCTTGCGGTAAAACTCGGCGTACTCGGAATCATGGCGGCGAACCTGGTCCGCAGCTTGAATCAGATAATAGCGCAGGTACTTGTTCCCAGTACGCATTCGGGATGTTTCATCGGCTTCGTACTCCCCGGATTGGTACTGATTCCAGACCAGTCCGGCGTACTTGGCTAAGGCGTTGTGGTTCTTGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTAGCGTGCCTATGAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTGTAGGGTGCCTATGAGGAATCGAAAC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //