Array 1 510185-513925 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACLFJ010000001.1 Elizabethkingia anophelis strain EA8 NODE_1_length_684645_cov_142.187622, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 510185 47 100.0 30 ............................................... CATTGCTTCATCAATTGCGTTTTCCGGATT 510262 47 100.0 30 ............................................... AATTGTTAGAAGTTGGTAGAGACTGATAAA 510339 47 100.0 30 ............................................... CTCAGCAATGTTATATACGATTTGAGTTGT 510416 47 100.0 30 ............................................... TTAAGAGCATAATCAGCATCTACAGTGTTG 510493 47 100.0 30 ............................................... TCATGGAAAGAATCCAATACATTACTGATT 510570 47 100.0 30 ............................................... AAAGTCTATTGAAATAATCTCCAAACTTCT 510647 47 100.0 30 ............................................... CCAGGTGAAACATGGGACCCGAATGCTTCA 510724 47 100.0 30 ............................................... CCAGGTGAAACATGGGACCCGAATGCTTCA 510801 47 100.0 30 ............................................... TTATTACGGGCTTTTTTTCGGTTGTAGTGT 510878 47 100.0 30 ............................................... TTGACATTCTTATTCCTTGCAACCTTATAA 510955 47 100.0 30 ............................................... GAAGTGTCGAACATTGGGGCGTTTGGGATT 511032 47 100.0 30 ............................................... GGGCTGAAAATTTCTTCCATAAGTCTGAAC 511109 47 100.0 30 ............................................... AAGAATGCAATGGAATCGAAAAAATGTATT 511186 47 100.0 30 ............................................... AACCCTTTCCGCTTCTTCTTTGTCGGCGAT 511263 47 100.0 30 ............................................... ATACAGAGGATGCGCAGGAATACGATTATA 511340 47 100.0 30 ............................................... ATCTGCATCAATATCGTCAATTGCCTTTTG 511417 47 100.0 30 ............................................... AAACTGAGAAAGTTTTACAGCTTGATCTGT 511494 47 100.0 30 ............................................... TGTATGGTATCTGCGTTCCAAATTCTAATA 511571 47 100.0 30 ............................................... GTAATTGCGTTTGTAATTTCGATTGAGTTC 511648 47 100.0 30 ............................................... AAAAGGAGTTCTGCAGAATGAAAGCGAAGG 511725 47 100.0 30 ............................................... CATATCTATACCACTTAATAATCGAGCAAA 511802 47 100.0 30 ............................................... GAGGCTCAATGAGCTGTATGGAAGCTGTCC 511879 47 100.0 30 ............................................... TACCCTGAGACTTTGGTGTTTCGGATTTTG 511956 47 100.0 30 ............................................... CGGTATCTGATACCAGAGTTTCGATAGCCT 512033 47 100.0 30 ............................................... TAAGCTCCTCATGAAGATTAAGAGCGTTTG 512110 47 100.0 30 ............................................... AGCCCGTTAATATCCTGCATTAAGGTTCCA 512187 47 100.0 30 ............................................... GGTCGAACGCCTCCGGTTGTTTAACTCTCA 512264 47 100.0 30 ............................................... GAAAATAATCACGTTCAAAAAGGGAAGTTC 512341 47 100.0 30 ............................................... AATAACCCATCTGTTAAATAGCTTAAGTTG 512418 47 100.0 31 ............................................... GGAAAAAGCAAAGATAAGCCTAAAGAATTCG 512496 47 100.0 30 ............................................... TAGAATTTGTATCTGCAAAAGATGAAAGAG 512573 47 100.0 30 ............................................... TAAGACTTAGAATATCCTTACAAAAAAAAT 512650 47 100.0 30 ............................................... GTAAATAGCGTTATTCCCATGTTATGAAAC 512727 47 100.0 30 ............................................... TAAATCCTGCCTGTCATGCAAACGTGCTTC 512804 47 100.0 30 ............................................... CGAGTCTAAATAGCCATGTGGGCGTGCATG 512881 47 100.0 30 ............................................... CGAGTCTAAATAGCCATGTGGGCGTGCATG 512958 47 100.0 30 ............................................... GGGTTCCCATATATAAAAAATAGGATCATA 513035 47 100.0 30 ............................................... GACAACATTATTAAGCTTTCAGAACTTGAA 513112 47 100.0 30 ............................................... AGAAAAAGAGAAGGTATGAGACTGCTAGCA 513189 47 100.0 30 ............................................... TATAGTTCACTACCCCAGAATTGCATAGAA 513266 47 100.0 30 ............................................... TGAAAAAATAACGTGTGAAATTAAGAGTAG 513343 47 100.0 30 ............................................... TGAAAAAATAACGTGTGAAATTAAGAGTAG 513420 47 100.0 30 ............................................... GCATATGAAGTGAGGTACTTTTATAGATTT 513497 47 100.0 30 ............................................... AGCTTTTAGGGTAGTTTCTGGTACTTCAGA 513574 47 100.0 30 ............................................... GGCCCATTCTTTTAAGGCACTAATAGGCGG 513651 47 100.0 30 ............................................... CGTTAATACATGATCTCCAATTGCTGGAGC 513728 47 100.0 30 ............................................... GTCTCTCTGTTCATCTGTGCAACCAATTTA 513805 47 100.0 30 ............................................... CAATTCCAAGCATACCCAACATACCGAAAC 513882 44 91.5 0 .....................................--..-....T | ========== ====== ====== ====== =============================================== =============================== ================== 49 47 99.8 30 GTTGTGTTATATCACAAAGATATCTAAAATTGAAAGCAATTCACAAC # Left flank : GATGGAAAGACCAGACCTTTGCTGGTGGCTGTAAAAACAACAGCATCATCACTATATAAATGTTATACAGGAGAAAAACGTTTGATTGCTTATCCTGAACTGATATGAAAGCCGAAAGGTTTAATGCTTACCGGATTATGTGGGTTCTAGTACTTTATGATTTACCAACCGAAACAAAGGAAAATATGCGGGATGCCAATCTATTTCGTAAACGTCTGTTAGATGATGGCTTTTCGCTTTTTCAGTTTTCAATGTATATCCGCCACTGTCCCAGTAGAGAAAACGCAGAGGTCCACATCAAAAGGGTAAAAGTCATGTTGCCTAAAGCTGGAAAAGTTGCTATTATGTGTATTACCGACAAACAGTTTGGTGATATTGAAATTTTCTTCGCCAGAAATAAAGAAGAACCACCGCCGACCTTTCAACAGTTGGAATTATTCTGATTTTTAAATTCTAAAAAATAATAAAATCCGTTGATTTTCAACGGATTAAATTTTGAG # Right flank : TAAATTAAGGTGTTTTTATTGTAAATTAGATTTACATAATGAGCCTTTTGTGGTTAACCCTGTTTAGTCGATAAAGATCATTATAAAAAAACAAAAACCTTTCAGTACTCCTGAAAGGTTTTTTTGTATGGTTTAGGTTTTTAATTTTAATCGTGCATTTCGCTTTCGACATAGCCTTCATCTTCGATCTGGAAGGTCGTATGGCTAATTTTGAAATTACTGGTCGCCTGATCGGTGAGTATCCGAAGCATTTGGTTATGCGGAATGCTTTGATCGGAGACAACATGGGCGCTCATCGCATTGATACCAGAGGTTAGCGACCATACATGGAGGTCGTGCAGGCTTTTAACACCCGGAACTTTTTCCATGGTACTGCGCAGTTCATCAATATCTACATCTTTAGGAGTACCTTCCAATAATACATGAATAGCTTCCATCAGAAGTCGCCATGTTCTTGGGAAGATCAGTAAACCAATACCTGCAGAGATCAGTGGATCGGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGTTATATCACAAAGATATCTAAAATTGAAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAATTTTCACTATCTTTGTGATA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,4.87 Confidence: LOW] # Array family : II-C [Matched known repeat from this family], //