Array 1 45434-40407 **** Predicted by CRISPRDetect 2.4 *** >NZ_VOXD01000028.1 Lewinella aurantiaca strain SSH13 contig28, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================================================================================================================= ================== 45433 37 100.0 34 ..................................... CCTCCCATCAATTTTTAAAGTATCTTCAAACGTG 45362 37 100.0 36 ..................................... TAGTTAGGGCAAAATCGTAAACAGCCGAAGGTCCAA 45289 37 100.0 37 ..................................... TTTGCCCAAAAACTCCAACTCGTAGTTTTCTCCAATT 45215 37 100.0 35 ..................................... TGTCTTTTGGTTGTTATAGCAATTAGGTCGTTTAG 45143 37 100.0 37 ..................................... TCTTTGAAATTCAGCCTTGTGCTTATTGGGCTTCTTG 45069 37 100.0 33 ..................................... TACCTTTACAAAGTCGGAAAACTCCGACTTTAT 44999 37 100.0 35 ..................................... TCTGTGTTTTATTTTATTCCATTCCTGAGCTATTG 44927 37 100.0 32 ..................................... AGCAGCTTCAATGTAAGAAAACAGAGCAGCAC 44858 37 100.0 34 ..................................... TTTGTTGTTCATCCCAAGAATTGATTTCTTCATT 44787 37 100.0 36 ..................................... CTGATAATATTGATCTTATGTGCATTTCTCTGCGTT 44714 37 100.0 35 ..................................... TCTTCCACGAAGATAGCGTTATTTACTTTGTACGC 44642 37 100.0 34 ..................................... CGGGTTGCCCGCAACATTTACATCCGCGAAACAG 44571 37 100.0 34 ..................................... CAGTTCTTCTGCATGATTACATGTCTTCATAACA 44500 37 100.0 36 ..................................... TTGAAACGGTCAGGGTGGGAAGCTGAGCTTGCGGGA 44427 37 100.0 35 ..................................... CGCCGGTTTCGACCCGGACCAAGCTGCTGTACTGG 44355 37 100.0 35 ..................................... TTACAGCTTCGTTGTGGGCTTCATTGATTTCTTTG 44283 37 100.0 35 ..................................... GATTAAATCTAAACCAGTCATCGCAAAAGGATAAA 44211 37 100.0 35 ..................................... TTACGGGCTCAGGTGTGAGCGGCACTAAATTAGTA 44139 37 100.0 35 ..................................... ATTTTGTAATTTCCCCCTACAAACCTTTGTAGGGG 44067 37 100.0 34 ..................................... AACCCGATAATCGCCGAAGCGGTCTTCGGGTTCA 43996 37 100.0 35 ..................................... TCACCGTCTCATTTCCACGGCGATCTACGCTGGTA 43924 37 100.0 36 ..................................... AATTGGTTCAGGAGATGACGGTAATTACCAGCCCAA 43851 37 100.0 36 ..................................... TTGTTTTCTAATGTTTACTGCCAACTGACGAAACCG 43778 37 100.0 34 ..................................... TCCCACCCATGTTACATGGGAGACGATAAAGGAA 43707 37 100.0 35 ..................................... CTTGCACCGTCTCAAGGTACGGAGGCTCTTTAGGT 43635 37 100.0 34 ..................................... TTAATGAGTTCTTCGGCAAGAACTTTAACGTTTT 43564 37 97.3 33 .....A............................... CGCATTCACGCCCAAAACCGGGCCGCTGGATGG 43494 37 100.0 36 ..................................... TGTGTTGAGCAGGTTTGCAAACTCCTGAACGCTGCC 43421 37 100.0 34 ..................................... TCTTCATCCAGCCCGATTGGCTCCCCGTCGAAAA 43350 37 100.0 34 ..................................... TTCGTTGCCCCAACGTATTGCAGGGCCGCCAATT 43279 37 100.0 34 ..................................... TTCCGAACTCCCCCACCGGTAAAAACTATTATTC 43208 37 100.0 35 ..................................... AGATTAAGGACCATATTAAAGATTAAATTGTAACT 43136 37 100.0 34 ..................................... GAACGTTGTACACTCTTGCGAGGTCAAACGCGAA 43065 37 100.0 35 ..................................... AAGGTGAATTTTAACCTTGACTCCGGCTTTTCAGC 42993 37 100.0 33 ..................................... AGAATGTTCTGCGTAAAAGCACATAGATCCTTC 42923 37 100.0 33 ..................................... CTTAGTTCTGAGTCGAAAGGACATCGGCATCAG 42853 37 100.0 41 ..................................... CTTAGTTCTGAGTCGAAAGGACATCGGCATCAGCAGTAGCG 42775 37 100.0 35 ..................................... GAATTTAAGAGTGTTTAATAAGATGGTGAAGGGTT 42703 37 100.0 34 ..................................... ATTTGCTCCGGCGACTTCGGCGCCGGTGGTAAGT 42632 37 100.0 35 ..................................... TATCTACATTTGTTCCAAAGAATAGAAATCCATTC 42560 37 100.0 35 ..................................... CTTAATGAGCTTCTCATAGTTCATAGATTCTGACC 42488 37 100.0 37 ..................................... TCGTATAAGTCATCCTTAATAGACCGTAGTTCTCCCA 42414 37 100.0 36 ..................................... TATGATCCCAACGTTTACGTCGTGGGTGTCTTTGCA 42341 37 100.0 35 ..................................... AGGAAGTATTTCTCCCATTGTTAAACGAAATCCGT 42269 37 100.0 35 ..................................... TAGTGCTACCTCATTCTTCTTAAGTATTTTGTACT 42197 37 100.0 35 ..................................... CAGGAGTCTCACTGTGTATATAACACCTTCTTTCG 42125 37 100.0 33 ..................................... AATGAATAATGTTGCTAGAGCTAGTAATATAAG 42055 37 100.0 33 ..................................... TTCCTTGCACGTTTGCAAAAATTGTTTGCGGGT 41985 37 100.0 145 ..................................... CACGGATGGGGTGTTATGATTCAACCAATACTACTCTACATTTTGATTTTCCCCCTCTCCCCCCGCCCTCTCCAACAAGCTTCGCCTAAGGCTCAGCGGAGAGGGAGCCAAAAATGTAGAGTAATGTGGTTTCAACCACATCAAA 41803 37 97.3 33 ...............................C..... CGAAGTAATTGGTATTGCCCAGGTAAGGCATCA 41733 37 100.0 34 ..................................... TAACCGTAAAGTATCCATTTAAAAAGAATGTAGT 41662 37 100.0 35 ..................................... ATCTCCGCGTCTGGCCGACATACCTCTTCGGCAAA 41590 37 100.0 36 ..................................... ACATCATAGGGTGCGCAATGGGTGACCGTGCCGGCG 41517 37 100.0 33 ..................................... AAATTATGCGTACCTAAAGATACAGCAGTAGTT 41447 37 100.0 35 ..................................... AGTAGTTGGTGTTACCCAGGAACGGCATCAAGATA 41375 37 100.0 35 ..................................... CACCAACAGATGGTGTGTTATGGTTCAGCCACATG 41303 37 100.0 37 ..................................... CGTTAACCTGCCCGTTGTAGGCAGACGTGAGGTAAGA 41229 37 100.0 31 ..................................... AGATCTTCGGTGGTTAGCTCAATAACGTCTT 41161 37 100.0 35 ..................................... TTCGGCAATGATTGCCGAACTGCTTTTAATTGTAA 41089 37 100.0 36 ..................................... TGTAATTTCATCTACGGAGAGTGCTCCGAAAGAACC 41016 37 100.0 33 ..................................... TGTATCCGCTAGGATGTGCCAGGGTGAGCGGGT 40946 37 100.0 35 ..................................... CTGCGTAGGAATGCGGGTAATTGCCTGGGGCCTAA 40874 37 100.0 34 ..................................... CCCGTCAGTTCGAGGGCGTATGCAAGGTCTTCGA 40803 37 100.0 34 ..................................... CCCATATCCTGAACCATATTGCTCAGTGCCTTCA 40732 37 100.0 36 ..................................... TCCTAGATACTTTCCCTCTTTGTTTTTGGCAACCCA 40659 37 100.0 35 ..................................... TGCCCGTTGTACGCCGATGTGAGGTAAGAAACTAT 40587 37 100.0 35 ..................................... CATAACTAACATAATAAAAGTAATGAACCAGCATT 40515 37 100.0 35 ..................................... TTCAGAAGAAAGTTCAATGTATTTCAAATAAATTG 40443 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================================================================================================================================= ================== 69 37 99.9 36 CCTCCGGAGCATCATCCATCACAAGAAGGATTAAGAC # Left flank : CTGACCTTAACGAACGCGTGGCTCAAATTCTTGGTATCATCCAGGCCGCCCCTATCAAAGCAGATGCGATGGTTTACCTGATAATGTACGATATTACCGACAATAAGGTTCGGCGAGAAATCGCGAACTACCTCATTACTGCGGGCTGTACCCGCATCCAGAAAAGTGTTTACCTGATCAAGACCGCAAACGCACGATTTGAAGAAATCCACGACACGTTGCGTGAAGTTAACGAGTTGTACGCCAACGATGACAGTATCATCCTTGTTCCCGTAAACAGCAGTGACGTACGGGGGATGAAACTTATCGGGCAAAATGTGGACATACAATTGATAACGGACCCTCCGAATACACTCTTTTTTTAATATATTCGTGTCGTAATCCCTACCGGCTATGCAGCAAGAGATTAAAGAAAAGTCACTTTTGGCGGTGAAAGCCAAGCCTACCCTTCTCCGGAACAGGCATAACAAGCTGAAAACAAATATATTAGAAAAAGAACT # Right flank : CGTTCAGAAAACGGCAGCCTGAAGGCTGCCGAACAGGTCTTCACAGCCGCCCTGAATGCAGCCGGCCGAACTCCTCCACTTTTGCCTTTCCGTCCGGTGCAAGGGCTTGGTTGCTCAGAAACCAGTACACGCCCCTGGCGATGATGAAGTCATCGGCCGCCAGCAGGTTGAGCAGAAGTTCGTTCAGGGTGTCGTCGCTGATATTTCTGCGCGACAAATAACTGAGCAACAGGTTCACTTCCTCGTACGAGTTCAGCAGCGGAACGTAATATGGCAATTCTGAGAGGATCTCTTCCGGGGGGTGCTTATCATCGTGCAATACCGATTTCAGGAACAGGACACGTTGCCGGGGACCGGCACCAGAAAAAATTCGCCTGACGGCAGAGCGCATAGTTTCCTTCGGGCCTCCGTTCAGGTAATTGATGGCAAGTTTAGTATTGTTGGTCTCCCACTCCCGGGTGGCGGCGACTACAGCGGCAATGGTAGCTTCGTCGTATAGA # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.13, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCCGGAGCATCATCCATCACAAGAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.50,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //