Array 1 290428-290590 **** Predicted by CRISPRDetect 2.4 *** >NZ_MULS01000005.1 Bacillus pumilus strain 104 Acontig_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 290428 32 100.0 32 ................................ GCGATAATGGCTTTTTTCGACCATTTTTCTGT 290492 32 100.0 35 ................................ ATTTCATTTTCAAGCTTCACCCAATGGCAGCCGCG 290559 32 87.5 0 ...................TA........GG. | ========== ====== ====== ====== ================================ =================================== ================== 3 32 95.8 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : CCATATAGAAAATTGAGGGTTTTGGCTATCATTCCCTAAAAAATGTTATAATTAAGGCAGAAATCGCAGTCGCACTCTACATGAGTGCGTGGATTGAAATTAATTTTCCATCCTCAATACTAGACTCTAATTTTGTCGCACTCTACATGAGTGTATGGATTGAGGTAGCTTGAAAGAAATGTTGACAGTTGCGCTTGATTTAGGTGTTAAAAACATGACTCTGGCCCAGTAGTCATGTTTTTAAATGAATTCAAAGCTGTTGATGAAACAGTAAAATAAGTATGTTTTCAAGAGCAATAGTTTTTAATTAAATAGGATTAATAAAAATTTGGTGCAAATGTGAGGTGAACATAAAAACCCCGGGACATTCGCACCTTTTTATTCGACAAAATTGAGAAAAAATGTTTATTGTTTAGAGGTGAAAACAAAATTCCATATAGAAAATTGAGGGTTTCGGCTATCATTCCCTAAAAAATGTTATAATTAGGGTAGAAATCGCA # Right flank : TAGCTTGAAAGAAATGTTGACAGTTGCGCTTGATTTAGGGGTGAAAAATATGACTCTGGCTCAGTAGTCATGTTTTTAAATGAATTCAAAACTGTTGATGAAATAATGAATAAGTACCTTTAGAGCAATAGTATTTAATTAAATAGGAATAAGAAAAATTTGGTGCGAATGTGAGGTGAACATAAAATCCTCGGGACATTCGCACCTTTTTATTCGACAAAAATGAGAAAAAATGTATATTATTTAGAGGTGAAAACAAAATTCTATATAGAAAATTGAGGATTTTGGCTATCATCCCCTAAAAAATGTTACAATTAGGGCGAAAATCGCAGTCACACTCTACATGAGTGTGTGGATTAAAATTTGTGTCTGTTTTTTGGTTAACTTCTCACCAGGAGTCGTGCTCTACATGAGTGCTTAGCTATTCTTGGTTTTAATAAGAGAAAACAAAAGCATTTATGTTTGATTCGAAAATTATTAGTGGAGTAACTATACTGATT # Questionable array : NO Score: 8.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 299278-299642 **** Predicted by CRISPRDetect 2.4 *** >NZ_MULS01000005.1 Bacillus pumilus strain 104 Acontig_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 299278 32 100.0 35 ................................ CTACCGCTATTTGCAATGTCCGTAAAGGCGTATGG 299345 32 93.8 34 .............CT................. CTTCTCTGCTTTTGGGGTGTATTTAAAAGTTGTA 299411 32 100.0 35 ................................ ATTTTTTCGAACACCTCGTCTAGCGTTGCCTTTGG 299478 32 93.8 36 ...........C......A............. ACATAATATTGACCGCTGTTTTTCACAATGGATAAT 299546 32 93.8 34 ...........C...................G TATGTATTCAATTGACTAATGCTCAATGTTTGAA 299612 31 81.2 0 ...........C.......TA......-..GG | ========== ====== ====== ====== ================================ ==================================== ================== 6 32 93.8 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : GCCTGAGACAGTAAAGGGAGCATTCAAAGTAGATGTGATGACACCACATCATTCAGACTACAACAGCGTCAAGCTAGATAAGATGAACAAAGGGGGAAGTGTTCCAGCCCCTCGAGACGATGACTCACCAACACCGATTCATTTCTTAACGGTGGTCAACGGCCGCTTTCAACTTCTATTAAAAACAAAAAAGAATCTACCAGAAGATGCGGAATGGCTCGAACTCGCCAAAACCATCTTACTAGGAGCTTTAGAACACGAAGGAATCGGTGCTAAAACAAATGCAGGTTATGGAAGACTTAAAATGGACGACGTCATTTCATAAGACTAAGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCGTTTTATTCGAAAAAAATGAGAAAAAATGTATATTTTTTAGGTGTGAAAACAAACTTCTATATAGAAACTTAAGGGTTTTGACGATTATTCCCTAAAAAATGTTATAATTAGGGCGAAAATCGCA # Right flank : GTAGCTTGAAAAAAATGTTGACAGTTGCGCTTGATTTAGGGGTGAAAAACATGACTCTAGCTCAGTAGTCATGTTTTTAAATGAATTCAAAATTGTTGATGAAATAATGAAATAAGTACCTTTAGAGCAATAGTTTCTAATTAAATAGGATAATAAAAATTTGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCTATTCATTCGACAAAAATGAGAAAAAATGTTATAATTAGGGCGAAAATCGCAGTCGCACTCTATATGAGTATGAGGTATAAAATTCTTATCAGAAGGTAGCTTGAAAGATATATTGACAATTGCGCTTGATATAGGTGTGAAAAACATAACTCTGTCTCAGCCATTTTATTAATGAATTCAAAGCTGTTGATGAAACAGCGAAATAAGTATGATTATCATCAGTAATAGTTTTTTTAAATAGGATTAAGAAAGATTCGTGCGAATGTGAGGTGAACATAAAATCCCTGAGGCA # Questionable array : NO Score: 8.64 # Score Detail : 1:0, 2:3, 3:3, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.84%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //