Array 1 67644-65048 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUHN01000016.1 Blautia sp. AF13-16 AF13-16.Scaf16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 67643 33 100.0 34 ................................. AGGTTATTGCTTTCGGATAAAAAATAGAACCTCA 67576 33 100.0 35 ................................. CTGTATTCCCATCATTCCCATGATCCCTGTTGTAA 67508 33 100.0 34 ................................. CGGCATCATATGTGGCATATGACTGTCTGTATAA 67441 33 100.0 33 ................................. CGGTACCGGACAAGCTCAAAGAAGTGTTATTGC 67375 33 100.0 34 ................................. TATACCCATAAGGTGCAACACTTGAAATAAATTT 67308 33 100.0 34 ................................. CTATCAGGTAGACCGTGTGATTGCCAACATGGGA 67241 33 100.0 36 ................................. GATGGATACGGCAAGAGCGTTCCTGAACACTATCCT 67172 33 100.0 34 ................................. AGCAGAAAGCGCTGTTGAGTAGATACGAAAATCA 67105 33 100.0 32 ................................. TTATTTGATAATACTCTGTATACGCAATCTTT 67040 33 100.0 35 ................................. AGCGTAACGGAACCGTCAGAGTTTTGAGTGATTTC 66972 33 100.0 35 ................................. CCTTGATATAACCACCCTGCTCCTGTCCGGCGGTT 66904 33 100.0 35 ................................. ATATTTACAAGTCCCCTTTTTAGTCACCTCGTATA 66836 33 100.0 35 ................................. ACTGCCAGCAGTAAAGCAGACTATCCCCCTGAGGT 66768 33 100.0 34 ................................. GGAAGAGGAGCTTCCGGATATCGTACAAAGGTGG 66701 33 100.0 33 ................................. TTATCGGCATATAGTATGGAGGCAGTATGAGAA 66635 33 100.0 33 ................................. TGAATTAGTGCATTAAGTAGCGGGGCAACCACA 66569 33 100.0 34 ................................. TCTGCTTTTTGGAAAACATTGAACGCATCCTGTA 66502 33 100.0 33 ................................. ATGGGTACTTTGATACGCTTACTTGTAACAGGG 66436 33 100.0 35 ................................. CTGTCTCAAATCCCGTTTGTGGAGGACCCAGACGA 66368 33 100.0 35 ................................. CGATAAAAGCATTGATTGCGATAGTCTCGTCGCTA 66300 33 100.0 36 ................................. TTCCATGACTGTCCGTGTCTTACCTGCCCCCGTCTC 66231 33 100.0 35 ................................. ATATTCAACCAGCGAGCGGATTTGGCGGTCTATCA 66163 33 100.0 34 ................................. TCTTTGCTTCTTCACTGCTTAGATGTCTTATCGG 66096 33 100.0 35 ................................. CGGATGGTAATATAGACGCCTGGCATAAGGTTGTG 66028 33 100.0 35 ................................. TACGATCATCAACATTTTTATCTGTAGACCGCTTA 65960 33 100.0 36 ................................. GGTGCATAAATCTTTGCCATTATCTGCGCCTCCTTG 65891 33 100.0 34 ................................. TAACTTGCCCATGTCATAGTTACGTGGCAAAAAG 65824 33 100.0 33 ................................. TGCAACTCCACAAGGCTATACATGTAATCACCC 65758 33 100.0 35 ................................. AATAGTCAAAAAGAAACAAAGTGGTTATCTCGATT 65690 33 100.0 35 ................................. ATCGAATGCTTCTTCTGTGGCACCGGCGCTACCCT 65622 33 100.0 34 ................................. GTCATAAATCATTATATAAGGGCTGTATCCCAAA 65555 33 100.0 35 ................................. TCCAAACGGACTCGCGGACTTGTGGGCACAGGTGT 65487 33 100.0 36 ................................. AAAAGACGGTAATGGACGTTATGAGAAGACCATAAA 65418 33 100.0 34 ................................. TCCGCCTGATGACAGATTTACCAAATCAGAGTTG 65351 33 100.0 36 ................................. GTCTATGCCATCTGGCATTGTCATAAATCCGTCTGC 65282 33 100.0 34 ................................. AGAGCATCTAATCGTGCTTTTATATCCACAGTAT 65215 33 100.0 35 ................................. GTGTAACCGGTATTACATACCTTTTTCCCCTCACG 65147 33 97.0 34 ........................A........ TCATCCTTTTGTACATTGCTCCGTTTGGCTCTGT 65080 33 84.8 0 ...............A.......AA.C.....C | ========== ====== ====== ====== ================================= ==================================== ================== 39 33 99.5 34 GTCACTCTCCGCGAGGAGGGTGTGGATTGAAAT # Left flank : ATCCAAAACCCCAACCGCCGACTGACAACAATAAAGACAAAGGCAAAAATCCAAGCAGACCATCCGGCGGTGGAAGCCAGAAAGGAACCTCTTCTGCAAAAACAGGGGATGAGACACCAATCGGCATGTTTGCAGGTTTGGGCGCCGTTGCACTGATCGCTATATTTGCCTGCACACTCAGTATCTTGAGAAAAAGAAAAAGGTCATAATCAAAAACAGAACAGCATAAAACGCAGTTCTTTTATCCCCCGGAAGATGACAAAAGTTCATATGCCGGGGCCGGGGGAAATCAGGAAGGAGAAAGTACCCTTTTTTAAAAAGAAAATATAATTTCAATAGGTGCGAATCCCAAGTGAACACAAAATTCCAGGGAGATTCGCACCTATATTTTTATGGAAAAAGGAGGATAATTATGTTAAAATAAAAAATAAGGAATTATATATGTGTAATATTTGTGCAAGATGTTCTAAAACGATGTTGGTATTTTGGGAGATTTTGCT # Right flank : AGCAATAAAACCAAATACCCAAAAAAGGAAAAATCCACTCTTTACAAATCAAGTGCAGAATAGAGCCATTTATATCAGCGCTGCATTTGGAGATACCGTAGTTGTTCACAAACAACCAATCTCCCGATTACGCAAATCCCCTTGACCATCATGACAAAACCCATTGACACCAGCAAAAAATCTAACTATAATAATGGCACAGTAACCCGGTAATTTACCTACAGCGTTGGTCGTTGGGCTGGCGCTGTTTTGTTATGCAGGATTTATTCTTGGATTTGGGAGAATATAACTGTCGGAGGATGAACATGGCAACAATCAAGGAAATTGCAAAGGCATGTAACGTCTCAATCTCAACGGTTTCTAATATACTAAATGGCAAGGAAAAGGCCAGACAGGAGACAAAGGAACTGGTTTTGCAGAAAGCAAAAGAGATGAATTACGTGCCAAATTATATGGCAAAAAATCTGAAACAAAAAAATACCAAAACAATCGGAATCATA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCCGCGAGGAGGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.10,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA // Array 1 94750-92169 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUHN01000018.1 Blautia sp. AF13-16 AF13-16.Scaf18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 94749 32 100.0 34 ................................ CAGAAGCCTTACTGATTGATGAACAATATATTTT 94683 32 100.0 33 ................................ AATGTCAGAGGGGCAGGTCAATGCTACCAGTTT 94618 32 100.0 34 ................................ TGTAATATTCCGTATGCGGCCCCAGTCCATCTTA 94552 32 100.0 33 ................................ CGATCACGCTTTGTGCATGAGTGCTTGCAAACA 94487 32 100.0 34 ................................ TATACAATGAATTAGAGATGGAAGGGGGGAGTTG 94421 32 100.0 33 ................................ CCGGTTTTTACCATCCACTTTTTTTCTCATCAG 94356 32 100.0 22 ................................ TTGTTAGTTGCCAGGTGTTTGC Deletion [94303] 94302 32 100.0 33 ................................ ATCACACAGAGGCTCATGCAGTAGGAATGACGG 94237 32 100.0 35 ................................ CGCAGAGTATGCAGGAGCAGATAACATCTGCCTTC 94170 32 100.0 33 ................................ ACTATGGTCTGCTCAGATATAAGAGCAGGCCGC 94105 32 100.0 35 ................................ ACTCTCCGCTTAAAAAGTTCTATCAGGACACCCTG 94038 32 100.0 32 ................................ ATATCAAAAAAAATTGCATCTATATCTTCTGC 93974 32 100.0 34 ................................ TTATGCCGACACGGACGCAAAGAGTCGTAGCGAG 93908 32 100.0 34 ................................ GGCAAGGTCCTTATATCCTCCCGCCTCATACAGA 93842 32 100.0 34 ................................ AGTGGATATATCGGCGACAATCCAAGCTACTTAT 93776 32 100.0 33 ................................ CCGTGGGCGAGTAAAAGAAAAGCAAATTTATCT 93711 32 100.0 35 ................................ AATAAAATCATACCTGATATATTATCTATTGTTTT 93644 32 100.0 33 ................................ CTGTGAACTTTGCAGGAGTGGAGATCAGACCGG 93579 32 100.0 34 ................................ CCGCCAAGGCACCGATATACTTAAAACTTTCTCC 93513 32 100.0 34 ................................ AACATTTATTACAAACTTAGGAGGGATAACTGGA 93447 32 100.0 34 ................................ CTTCCATTTCATGCTTAAAAGAATTAACGGTAAA 93381 32 100.0 34 ................................ CCCACATCCAACCAATAGGATAGCAATGATTACC 93315 32 100.0 34 ................................ TCCATCGGGATTTGCCAGTCATCAAATATCTTGG 93249 32 100.0 33 ................................ CGGCAGGAACAAGAGTCACAAACGGAGAATTGT 93184 32 100.0 34 ................................ CAGTTATTGACACGATTGGAATAGAGGTATCAGC 93118 32 100.0 33 ................................ ATTTCCAGACGCCCTTTTGCCCGCAGCGCCTTG 93053 32 100.0 34 ................................ AAGTAATCCCAGTTATGAGCCTATGTTCTTCAGT 92987 32 100.0 34 ................................ CAGTAAATAACAACATGGTCCACAAGCGGAAAAA 92921 32 100.0 33 ................................ ACTGCAACGCTCATGATAGCTTGAAGATACACT 92856 32 100.0 33 ................................ AGTTCACCGATGATTTGCCCACCCGGCTCCCTC 92791 32 100.0 34 ................................ ATCCGTCGCTATAAGCTTTATCTTGTTTGGTCCA 92725 32 100.0 33 ................................ CATTTGACGTCCTGTTTTTCTTGACGGAAATGG 92660 32 100.0 34 ................................ TACAGCATCCGTAGTACCAGTTATTGCTTTTATC 92594 32 100.0 34 ................................ ATGGGTACTTTGATACGCTTACCTGTAACAGGGT 92528 32 100.0 34 ................................ ATAGCACACCGGCTTGTCCCTCCTTTCTTACCGC 92462 32 100.0 34 ................................ TCCATCGGGATTTGCCAGTCATCAAATATCTTGG 92396 32 100.0 33 ................................ ACCATAAATTTCGTCCAATTTTGCCGTATCCCA 92331 32 100.0 34 ................................ AGGAATCGGTCATGATTCTGGCATATATTACTAC 92265 32 87.5 33 ...G...T..A..T.................. GTCTTGCCTCTATCAAAGAAAAGTTTGAATTTT 92200 32 75.0 0 ....T.....G...AA.A.C...A...C.... | ========== ====== ====== ====== ================================ =================================== ================== 40 32 99.1 33 GTCACCACCTTCGCGGTGGTGTGGATTGAAAT # Left flank : GATGAGTACCCGCCATTTTTCTGGAAGTAGGTGAGAGGATGCTGGTTTTGATTACATATGATGTAAATACTGAGACAGATGCCGGGAAAAGACGTCTAAGAAAGGTTGCAAAACAATGTGTTAATTATGGAAGACGGGTGCAGAATTCTGTTTTTGAATGCATTCTTGATAACACACAGTGTGTTTCATTGAAGGCTGTATTGGGGGATATTATTGATAAGGAAGTTGACAGCCTCAGGTTTTATTATTTGGGGAATAACTATAAGACTAAAGTGGAGCATATGGGAGTTGACAGGGGGATAGCAGCGGACTCGACTTTGATTTTCTAGTGCGAATAGGAAGTGAACAGAAAAACATTGGGAGATTCGCACCATATTTTGGGGTGTTGGGTGATGGAAAAAGGAGGAATAGAAGGGAAAGGGGTGGTGAGATTAGTGTGAAAGAGTCTATTAATTAGGAGTTTTATACAAAAATAGCTATGAAATTTGGGCATTTTTGCT # Right flank : TTAGTGACCAGACCTTGCAGAAAGAGGTGAGCATAAAGATGAATACAGCAATAAAAAAGAAACTCCCAATTGGAATAGAGAACTTTGAAAAAATTCGGACAGAAGATTTTTATTATATTGATAAAACAGGTCTGATCAAAGACCTTCTATATAATTGGGGAGAAGTAAATCTCTTTACACGCCCCAGACGTTTTGGCAAATCCCTTAACATGAGTATGTTGAAAAGCTTTTTGGACATTGAGGGTGACATAACATATACAGAAAAGTTATTTAATGGATTGGAAATTTCAAAAGAAACAAGCCTTTGCAAAGAATATATGGGCGCATTTCCAGTTATTTCAATTAGCTTGAAAGGCGTAAACGGCATAGATTTTGCAGCTGCGCGGGATATGATGCGTTCCATTATTGGGAATGAAGCGCTGAGGTTCTATTTTTTATCCGAAAGCAATAACCTGAACGAGAAAGAAAAAATGCAGTACAATCAGTTGACTGCAGTGGAT # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACCTTCGCGGTGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-4.90,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 18575-16360 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUHN01000006.1 Blautia sp. AF13-16 AF13-16.Scaf6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 18574 32 100.0 36 ................................ CAAGGTTAATGAGCTCAGTGAGCAAAACAGCAACAA 18506 32 100.0 33 ................................ ATGATGATTTCTGCTGCCAAACAGAGGAAGAGG 18441 32 100.0 34 ................................ CGTTATCTGTCTTAACAGTATTGCTTACTGACAT 18375 32 100.0 34 ................................ CTTTTGCTGGAGGAGGCAGAGGCTTTTGTGTTGT 18309 32 100.0 34 ................................ CGGTATTGTACTCTGTGGTGCTTCCCACCAGGGC 18243 32 100.0 35 ................................ GCTCCCAAATCAACAAACGGGATGTTACCGTAAGA 18176 32 100.0 34 ................................ CCTCATGTGGGTGATTGTCCCGTTACCACCTAGG 18110 32 100.0 33 ................................ TCAAGTGCTGTCTCCGCCCTTTCCGTTACCTGT 18045 32 100.0 34 ................................ TGCTCATATACGATTACTCTACCGGGTCAACCGG 17979 32 100.0 35 ................................ TCTATGATGTGGTTTCTGCCAGCAACCTGGAAATC 17912 32 100.0 36 ................................ ACACTGCATTGTTTATATCCTGGATCTCGGATCGGC 17844 32 100.0 34 ................................ ATTACAAGGAGTAACAAGGCCTTACCAAGGCTGT 17778 32 100.0 34 ................................ ATCCTTTCGACCTCTATTAAGGTGTACCCCGTAT 17712 32 100.0 33 ................................ GTATAATTAATACATAAATGCAAACATTTGTTC 17647 32 100.0 35 ................................ TCTGTAACAGGAGCATAAGCGCCATCGGCAGAACA 17580 32 100.0 36 ................................ CTTCAATTATTCCCTCCTTTATGCAACTATTCCAAA 17512 32 100.0 37 ................................ TCCGTATACATCTTCTGATCTATAGGCATATACTTCG 17443 32 100.0 34 ................................ TTGGTACATTTGCGTATGGGTTGGATGGTTTTAA 17377 32 100.0 33 ................................ ATGCGCAGGAAAAACCGCCGGAACAGCTACTGT 17312 32 100.0 33 ................................ CAGGTCAGGAAGTGAGAATGCGCTTGCCATACA 17247 32 100.0 33 ................................ TCCCGAATAATCTAATCCGTTTTGTGCTCCTGC 17182 32 100.0 34 ................................ TTCATGCCGTATTCTCTATCGGCAAAATCAAATA 17116 32 100.0 34 ................................ ACCGTCAGTAAGAGAGATATGTAAGGCGGTTGGT 17050 32 100.0 33 ................................ TCCTGAAAAATCAAGTCCATTCTGGGCACCGGC 16985 32 100.0 33 ................................ ATTCCGGAGGCGCTCTCGCTCTGGCGAACAGTC 16920 32 100.0 35 ................................ TTTCCAACCCGGTTTATTGTGCAAATGAGCTGGAG 16853 32 100.0 34 ................................ ATCATATTACAGTGCCTTCTTGCCGATGTCGGTG 16787 32 100.0 34 ................................ TATCAATGGAAGCAGGGAAAAGCTACAACAAAGG 16721 32 100.0 33 ................................ TCCTACATTCAATTCAAGCTGATGCTTGTTCAA 16656 32 96.9 34 ............................G... TTTTGCTTCCTGCTGCCGCTCCTCCTTTCCTTGC 16590 32 100.0 34 ................................ CCCAATGACATGCCGGTCCGTGATTATCCGCCCG 16524 32 93.8 35 ....T..........A................ CATGCTCACCCATTACTATTTGATGGAGCATTCCC 16457 32 96.9 34 ..............A................. TTTTCTTACATCTTCCCAGTTACATAACCGTTTT 16391 32 90.6 0 ......................CA.....T.. | ========== ====== ====== ====== ================================ ===================================== ================== 34 32 99.4 34 GTCACTTCCTTCGCGGAAGTGTGGATTGAAAT # Left flank : GTTCCGTTCATCAGGTATTCTATGAATCAGAAAGATGGAAAGTTAAAACTTTCATCCAGGACTGGCTGGATTTTATATGAAGGGGATCTATCTGGTTTTGTGCCAATTTTGGAAGCGGGTAAGTATCTGCGGGTAGGAAAAGGTGCTACCATTGGATTTGGACATTATGATATTTCTTATGATAAATAATGGGGAAATAAAAGGCTGGAAACAGTGGGATTGAGAGGGATTGTGATAAAAATCGGCCTTGAATTTTTTGTAGAAAATGCAGATGATATAATATTTGTTCAGAAGATGATTACTAAGCTTATTTTATAAAGTGCGAATGTGGAGTGAACATAGTTTGCCGGGGAGATTCGCACTTGAAAAAATGGTTAAAAATTGATGATGGAGTGATTTTTTTAAGATATATTTGTAGGAAAGGTTGCATTATTAATCAAAAAGGGTTAAAATTTGGTAGAAAGAAACAATATTTATTGGGAATATTGTGCATGTTTGCT # Right flank : CAGACAAACGTCTTTCCATATAACAGTGAGAGCATATCCCATATTTTCAAAGTATATCTGGATGTAGATATCCCTGTGGAAGTGAGAAAATTCGGATTTCTTGAACAGGTGCCAGAATACAATCTGGCTCCGGGATACTTGGGGATATAAAGACGGTTTTTTCAGGTCTGACACAAATCTTGGTACTGAAAAAAGCGAGGAGGAGGATAGAAGAGAAAAATTGGAGTTTCTAATGGAAACCGTAACCATTTTGTTCAACGGAGGGAAGAAAATTTATGTTTCGGACTATGCAGGGGGAGAAAATGTTGTAAAAGAATTGACAATAGATGCATGCCTCTTTGATATCGGACGGCCGTTTTGGGGACGACCGCGGGACAGAAAACCTGGACATTTGTCTCCAGTTCGGTCCGCCCGGGGAGGGGAAGATAAAGCCGGTCAGCCTGGCTGATAAAGAGGTGTTTACAGAGAACCTGTATGGCTTCTTATGAGAGATGGCAGGT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTTCCTTCGCGGAAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.40,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 2 242443-241557 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUHN01000006.1 Blautia sp. AF13-16 AF13-16.Scaf6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 242442 32 100.0 33 ................................ AACCTGGACTGGTATGCAAAAGGCGGATTCCCA 242377 32 100.0 34 ................................ CAGCTATCTACCACAACCTTATTATCATACAGGT 242311 32 100.0 33 ................................ TCTCTATTATACAAAAAAATGCTCCTTTCTAAC 242246 32 100.0 34 ................................ GATTAAATTCATGGTTTCTCCTCCACTTTTTCCA 242180 32 100.0 34 ................................ ATTCCACTGGCTCCCTTGCGGACGCAACCTGTGA 242114 32 100.0 34 ................................ AACAATGATAAGGGGACCGAGGAGGTCTACGGAT 242048 32 100.0 34 ................................ AAATACTGTGTTAGAGTGATACATTACTCACTCA 241982 32 100.0 35 ................................ AATAAGTTCAGGCGGTAAATCTGTTTCTATGGGGG 241915 32 100.0 33 ................................ TATATAGATGACAGGAGAAAAGCGATGAACGAA 241850 32 96.9 34 .........A...................... ACAACGTATGAGACAGGTTTTATATTTCAGTCTG 241784 32 96.9 34 .........A...................... CTGATAAATCCGGTTCAGTTTAAATGCAATATTT 241718 32 96.9 33 .........A...................... AAAGCTGTTGTCCCCTCTGCTTGTGCATGTATA 241653 32 96.9 33 .......................A........ ATGCAACATCTGCTTCTACTCTTGGACAATTAA 241588 32 81.2 0 .............A..C.A..CA...A..... | ========== ====== ====== ====== ================================ =================================== ================== 14 32 97.8 34 GTCTCCGGCTTCGCGCTGGAGTGGATTGAAAT # Left flank : GAATAAATTGCTTTCCCGTGAGACTTTGGAGGCGTATTTTCTGGAGATTGAGAAGAAAATTAAGAATTATACGGAAAATCTGGAGGATGATATGCTGCTTTTGAAACCGGAAGGGTGTAAGTATAAAAGATTTACACTTATACTGGCGCAGCACAGGCATCTGCATACGCATATGGGAATGATTATGGGCGTTATAACAGCAGAGACAGGTCTTTGGCCCAGAGTCCTGGGACTGGAAGGTAAATTCCCGGATGGGGAATATGAGAAATATTTTTGAGGCGAAGATGCTTTTCTGGAATATTTGGATTAGGTGTGTTATAATGATATAGTGCTTTGGTGGTGCGAAACGTAAGTGGACATTAATTTCTTAGGGGATTCGCACTGGAAAAAGCGCATTGTGATAGGGGGATTGGTGGAGGAATGGGGTGGAGAATATAAAACATTAGTTGATTTGTATAAGGAAATGTGTAGAATATAGATGGAAATTGGTAATAATTGCC # Right flank : GCTTGTAGGAATACAACCACAGTTTTGGGTATTGTCTTTAGCTTCACACCGAAGACAGTCACAATAGTATTAACACTAAATACACCGGACAAAATTCGTACCTTGAAATTAACGTCCACTTAAATTAGAATCAAAACAAGATCACCTACCATTTATTCAACATTTTATATTTACGTTTAATAAAGACATAAAGATAATAATCAGCACTGCAAATTCAAATTTTTATCGCATTTATGCATAAAAATCATCTTGCAAATGATTCCCCAACAATAATACATCCCAGGAGATTTACATGAGAAAGCGTTATAACGTGACCGGAATCTGTATACCAGAGAAACATTATATGGTAGACATATCACAAAAAGTAAAACAAATTGTAGAAGAATACATTGAACCAGGGTATTATTTTGCAATTAACAGAGGCAGGCAATACGGGAAAACCACAACGCTGTATCAGTTAGAAAAATATTTGCAGGATCAGTACATGATTATCAGTATCA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:0, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGGCTTCGCGCTGGAGTGGATTGAAAT # Alternate repeat : GTCTCCGGCATCGCGCTGGAGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : NA //