Array 1 42678-47303 **** Predicted by CRISPRDetect 2.4 *** >NZ_ABDV01000023.1 Clostridium perfringens B str. ATCC 3626 gcontig_1106202603884, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 42678 29 100.0 37 ............................. CTTTTTTATCTGTTTTGTTTCTGATGCCATCAGTTAA 42744 29 100.0 36 ............................. TATGTATTTATAAACTTCTTCAACCATGCAATTATC 42809 29 100.0 37 ............................. CATACAGATTACACTCTAAATTTACATTATTGTGTAG 42875 29 100.0 38 ............................. AAATTCATTTAATTTTTCCTCCTTAATCATTTTTATTA 42942 29 100.0 36 ............................. ACATTCTCAAAAATGCCTAGAGGCTCTCAAGTATTA 43007 29 100.0 37 ............................. ACGTTGTGGAAAAATGCTTCCCAAGCTGTAAGCTACT 43073 29 100.0 37 ............................. TTGTCAACAACTTTTCCAGGTTGAGGAGTTTGTCTTC 43139 29 100.0 37 ............................. TAATAAGGCCTTTAATTGCTTCCTAGGAATGTTTTCC 43205 29 100.0 36 ............................. TTGACATAATAAATTAATTATGGTAATATAAAAATG 43270 29 100.0 36 ............................. ATACACACTAAGGAGATATATAAGCCTAAGGTGATC 43335 29 100.0 37 ............................. CTCTATAGAATGTTATTCTTAACCAGCCCTTAGTTCT 43401 29 100.0 37 ............................. GCATTAGCTAAACATATAGGCTGTGACTCCTGCTTTG 43467 29 100.0 37 ............................. AATAAAGTGATATCTGAACCAAAACCTTGAACAGGTG 43533 29 100.0 37 ............................. TGATACAAATAGACTATTCATGAGGGTAGCCCAAAAC 43599 29 100.0 37 ............................. TGGCATAAATCCTTGAATAGTAACTATAACAGGTTCT 43665 29 100.0 37 ............................. AAAAGAAAAGGACCTTGGAAACACTTAAAAATTATGT 43731 29 100.0 36 ............................. ACCGCATAAAGCTCAAATACAGGTTCGCTTCCAATT 43796 29 100.0 38 ............................. TCTAACTATCTCATTAACATCACCGCTGTAATTTTTCA 43863 29 100.0 37 ............................. TAACTGTTGATAGCTCTTACCCTATAATACCAAGTTT 43929 29 100.0 37 ............................. CAGGATAAGTATTGCACTCACCTTTGAATTTAGCATA 43995 29 100.0 36 ............................. TTATTACTTTAGTGTCATGATTAAAGCTAACTTGAA 44060 29 100.0 37 ............................. TATTTTAACATTTTCTTAATATCCTCAAGTTCAGATC 44126 29 100.0 36 ............................. AAGAAGAGCTACTAGGGAAATGATACTAGAAACAAG 44191 29 100.0 36 ............................. AGGGTAAATAAAGGAGGACCTTAAAGGCCCTCATAT 44256 29 100.0 36 ............................. AAGGTAAAATGCAGGCAATGAAATCAGCGATTGAGG 44321 29 100.0 37 ............................. TTGGAAAGAGCATTTTGTTGCTATGGGACTAAAGACA 44387 29 100.0 36 ............................. GGAAGAAGATGAAAAGGGGTTAAGGTTTGAGATTGA 44452 29 100.0 37 ............................. TTTTAGAAGAAGGAGAAAATTTTGTGTATTTTGCAGA 44518 29 100.0 37 ............................. TTTTGAATTCGGTACGAAATTCGTACTGAATTCCCTA 44584 29 100.0 37 ............................. GATGAAAGATTAGCCTTTACTTCTATTGATATAGTAT 44650 29 100.0 37 ............................. ATCATAGGAAGTCAGAGAAAATTACAAAGAAAATTAA 44716 29 100.0 36 ............................. TGGCTCCATATGTAGGAAGTAAACAAATTGCTAAAA 44781 29 100.0 36 ............................. GCACTATAAGTTGGATGATATTTCCCAGTACTACTT 44846 29 100.0 39 ............................. TTAAATGAATTTATCATCTCAATTAGATTTTGTTTATCA 44914 29 100.0 37 ............................. TGTTAGAGCAATAACATATTGGAAAAGAGAAAACTTA 44980 29 100.0 37 ............................. TTATTCCCACTAGCAAGCAATTTAAATTTATCAATGA 45046 29 100.0 36 ............................. GATTTACATATATACCTTTGAACTGAACATCCTCAT 45111 29 100.0 37 ............................. GGGATAGATCGGCTTCAATGAATACTCTTCCAGGAGA 45177 29 100.0 36 ............................. TTTACTGATAGTGAATTACACACTGCTCTATTATCA 45242 29 100.0 37 ............................. ATTGTGAAGACACTCACATTTTATAGGGCTGGTACTA 45308 29 100.0 36 ............................. TTGACATAATAAATTAATTATGGTAATATAAAAATG 45373 29 100.0 37 ............................. GTACTACAATGGTGTCTTAAACTTAAGAATGAGAAGC 45439 29 100.0 36 ............................. CTATATTTTATATTCATACATTTTACATAAAAGTCT 45504 29 100.0 36 ............................. TTTTACATTGAGGTATTATTGTAGACTCCCTTATAA 45569 29 100.0 37 ............................. TAGCAAGGTTCCTTAATTGTTTAGGATGTGTAAAGGG 45635 29 100.0 36 ............................. GTTAATTTAAATGATAAAAGAGGTCAAGCTAGACTT 45700 29 100.0 37 ............................. TAGGTTGTGTATCTCTTATATCTTGTATTACTTCTTC 45766 29 100.0 36 ............................. ATATCAGTCTGATATCCCACATATCAGTTGAAACTA 45831 29 100.0 36 ............................. ATGATATAGAAACTAGAGGCTTAGATAGGTTTAATA 45896 29 100.0 36 ............................. ATGTTAATAGACTATAAAACAATTCCAAATCCATTC 45961 29 100.0 36 ............................. TTCTGTAATTTAAGGGAATAAAAAAAGACTATCTCT 46026 29 100.0 37 ............................. TAAATAATCCACCGTACTTTCCATCAAGACTAATATC 46092 29 100.0 37 ............................. CAAGGTATAGTGTCTTTAATATATAATTTTTCATTTA 46158 29 100.0 37 ............................. GTAACAAGATGTTCTCCTATAACTCTATTAACCTTAA 46224 29 100.0 36 ............................. GATGTAACATGAGCATTTTCTATAGTTGTAACTTGT 46289 29 100.0 37 ............................. TTCTAATACCAGGAATGTTTTGGCTTCCATCTAAACC 46355 29 100.0 36 ............................. TATCTTATAAGACTTTTTAAAAATTTTGATGGTGTT 46420 29 100.0 37 ............................. AAAAGATACATGAATATTTTACCATATATATTTTTTT 46486 29 100.0 36 ............................. GTTTTCAAAATATCAGAATTAAGCTTTGATAATTTA 46551 29 100.0 37 ............................. AAATAATCAGGGTGAGATGCACGAGAAACCCTTGCCC 46617 29 100.0 38 ............................. TTAGTTCACACTCAGGATTTTTTACATACAATATTGTA 46684 29 100.0 37 ............................. GAGAGAGCAGCAAAATTTGTTGGAAGACAAATGTTAG 46750 29 100.0 37 ............................. CCTGCAAATTTAACCACATACAAATCACCACTACCTA 46816 29 100.0 36 ............................. CTATAGGGGCTAGCTTAGGAGATATGCAACATAATA 46881 29 100.0 36 ............................. TTAGCTGCATTTAAATCAGTTATATCAGCTTTCATG 46946 29 100.0 36 ............................. CGGTGGAATGGAGGAATATGGTTACACTATAGAAGA 47011 29 100.0 37 ............................. TAAGCTGAACTTCATGATTCGTTTTTGCACTCACGAC 47077 29 100.0 37 ............................. ACCGAAAAACCGACCAATAATGAAAACATTACAGAAG 47143 29 100.0 37 ............................. CATTTGTTAGGGCAATAAAAATATATTTTTCTAGTAC 47209 29 100.0 37 ............................. TCATCTGATAAAACTCTTAAAATAATATATTGATTAC 47275 29 82.8 0 ............T.....T.GG......A | ========== ====== ====== ====== ============================= ======================================= ================== 71 29 99.8 37 GTTTTATATTAACTATGAGGAATGTAAAT # Left flank : AACTTAGAAATATAATATCTTTTGATATAATACCTCAATGTATTTATGAGAAAAATGAATCAGAAATTGAAAGCTTACTTGAAATTATAAATGATGAAAAAACAGATAAAATAAATAGAATAAAATCCATAGATAAAATAAAAAGTTTTACAGTATCAGTTGGGCAATATGATATTGAACTTTTAAAAAATAAACTTATTATGGAGTTAGAAGTAGGAAAGTATGAAAGAATTCCAGTATATAAATGCAATTATTCAGAGTTAGGATTTACTAGAAACACAAAAGAAGATGTATATGATAATTTCATATAAAACTAATTTTGCAGTAGATCTATTTTCTTATAATACTAGCTGTAACCAAGTAATATCAATGGTTAGAAGAAGATTTTTATTGATACACTAAAACATTACTGATGGTCTACTGCAAAATTTTAATATTTATGATAAAATTAATAAGAGAGAATGAGGCTATTACTAGCTTTTAGCATTTTAAAATTTGGG # Right flank : AAAATGAAAAAAAGCATCTTAAAAAGATACTTTTAAACTTAGAATTTTTTGTTTCAATAGCAAGTGCACCTAATGCAGATATATTTCCAACAATGCTTTGGATTGCTTTATATACAACATTGCCATTTCAAAGTGTAATAAATCTTTTAGTAGGCTATAACATAGAGAGTTTGTCATATTTAATACTTCCAATATATATGGTAACATTAAGCTTATTAAGTTATAAGGTACTTAAATTTAAACCTCAAAAAAATAAACAAGATAAGTAATTTTAGTTTTATAATAAGAATTAAAAAGTAAAATGGACATGATATCTGTCCATTTTTACTTAATTATTAATAGATACTTATTAAATTAAATTTAGAACTTTGAATCTAATAATCTATGCATTTAGCAGTTTACATCTAATAGCTCCCTTGAAATTTCCTCAAACCTTTCATCAGATATACCAAGTTTTTTCTTAAATATATCATCATCAATTCTAGCAACAATAACCTCAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGAGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //