Array 1 36993-35837 **** Predicted by CRISPRDetect 2.4 *** >NZ_SXBR01000021.1 Clostridium sporogenes strain IFR 18/121 contig00021, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 36992 29 100.0 39 ............................. TTTTTTAAATTACCTGTTTCTTCTCCTATTCCTTTAGAG 36924 29 100.0 38 ............................. CTCGAATTGCAAAGTTCTATAATGTAAGGGTCTTGTCT 36857 29 100.0 36 ............................. ATAAAGGTGTAAAATTTAACTCGATTAATAAGCTAG 36792 29 100.0 37 ............................. TCATTTGAACTCGTTTTTATTATATGTTCTAACATTG 36726 29 100.0 40 ............................. TATTGTTACTAAATACAAAGAGGGTTTATATGGCTAAAGG 36657 29 100.0 38 ............................. TTGGGCTAAATATTCTACTAATCCGCCTGTTTCGTCGC 36590 29 100.0 38 ............................. AAACTTCTTCTTTTAGCATTATCTTCTGTTTTATTCCC 36523 29 100.0 38 ............................. TACACATGCATTTTCTACACATGATATATCCTTCATCG 36456 29 100.0 37 ............................. AATCTATAGTAATCATATCCCTTTAAACCTCCGTTAT 36390 29 100.0 38 ............................. AATATATCTTTCTATTATTTTTACTTTCGATTCTCTAG 36323 29 100.0 37 ............................. TTTTAAACTTCAAATATATCTTTTATTTCATACTCAC 36257 29 93.1 36 ................G...........A TTACAAGAATTTTTATTTGTTGTAAAATTAAAATAA 36192 29 89.7 38 .........C.....C........A.... TTACTTAATTTAGGTTTTATGTTGACCTTACCGGATTT 36125 29 89.7 33 ............T........C....T.. ATTAAACATCAACCAATTTTGAGCTTGCACTGT GA [36100] 36061 29 96.6 36 ........................A.... AAATTTTCTATGTTCACTATTTTCCCAGCATGTTCA 35996 29 93.1 36 .......................C..G.. ATTACATATGTAGCAAATGCTACAGCAACAAAGATT 35931 29 89.7 37 ...............C........AG... GCGCTTGCAGCTCTAAGTAAACATTTCTAAGTCTTAC 35865 29 86.2 0 A.............G.........T..G. | ========== ====== ====== ====== ============================= ======================================== ================== 18 29 96.6 37 GTTTTATAGTTCCTATAAGGAAGTGAAAT # Left flank : TAAAGAGTTTTTAATCAGTATAAAGAATAATATAATAGCAAAATACAATTCATTTTATAATGAAGAATATAAAGGAATTTTAAATATAAGTATATTAGATGCAAACAATATAAGAAAGAAAATAGATAAATATAAGAAGTGGATATATGAAGGATATTTAGGTGGTTTTATAATAGAGGGAGATACTGAGATAGTAGAACTTGCTTATAGCTGTGGATTAGGTAGCAAAAATTCTCAAGGCTTTGGATGTATTGAGACATTTAAAGATCTTAATGGTATTAAAAATTATAGCAGAATAGTTTAAATTTAAATATTTTGCAGCGAGCTAACTTTTTTATTATATGTATATAAAGTATTGATTTAACTGAATTTTTTAAAGATTAAGTGGGTTTTATAAAAACATTACTGAAGGTTTACTGCAAAATCCATAGATTTAGGTGATTCTTAACATTGTTAAAAACAAGATGTAGCCTTATTTTATGGTAATTTTGAAATTGGGG # Right flank : AATTTTAATAATATTTAATTATTTGTATTATTTTTTATTGGGGGGAAATTTTTAATCTAACATAGTTTAAAATTTACTATAACAAATAAATACTATTAAATCCTTTATAAGTAAGTTTAAAAAGAATTGTTATTTGGTATAATGTATATAAGCGTAATTACTAATTAGTAACCTTAATTGATAATTAAGTATTGAGAATTAAACATATGTTAAGGAGGTGATAATATGGAGTTTGATATTTATACATTAGTAGAAAATGATGAAATAGAGTGTAAAGAGGCTTTAGGTGGATTACCTAAAGATTTATGGGAGACTTATTCAGCTTTCGCCAATTCTAATGGAGGAACACTTTTTTTAGGAATAAAAGAAAAGTCAGCGAAATTCTTTTTTACAGGAGTTAAGGATGAAGAGAACATAATTAAAGATTTATGGGACAATTTAAATAATCCTAAAAAGGTAAGTGCAAACATATTAGGTAATAATTCAATAGAGATTCTTAC # Questionable array : NO Score: 3.09 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATAGTTCCTATAAGGAAGTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.00,-3.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //