Array 1 206242-208511 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUSN01000004.1 Bacteroides caccae strain AM26-6LB AM26-6LB.Scaf4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 206242 47 74.5 30 TAAA..CC.ATA..A......G....T.................... AGAAAGGAAGAATTTTACAGGAAATGCACT 206319 47 97.9 30 ..............C................................ ATAACAAGAACGGGGAAAGTGATAAGGCCG 206396 47 100.0 30 ............................................... CCGGACAGTTGGCAGACTAAAAAAATAAGA 206473 47 100.0 29 ............................................... ACCGCCTCCTATTGGCGTGGCTGTGATTA 206549 47 100.0 30 ............................................... ACGCGTTCAAATGCCACGCAGGCTGATAAT 206626 47 100.0 30 ............................................... ATAGATCATTAAAAACAATGAATGATCTGC 206703 47 100.0 30 ............................................... GCTCTTGAGGAAATTGCCGTGGTTAGGACC 206780 47 100.0 29 ............................................... AAGCCAAGTGCATCATGGAATACCTCAAT 206856 47 100.0 30 ............................................... TTCAGGAGCGAGTAGTAATGGTCACGGGTT 206933 47 100.0 30 ............................................... ATAGATCATTAAAAACAATGAATGATCTGC 207010 47 100.0 29 ............................................... AATTTCAAATTAAGGTCCGAAGATTCGCC 207086 47 100.0 30 ............................................... TGCATTCATTCTCACCAGAGCCATGTTTTT 207163 47 100.0 30 ............................................... TTGCATTCTTTTTACCCGATTCGAAAGTTA 207240 47 100.0 29 ............................................... GACGAGAAGGGGTGGAATCGGGCTAGATG 207316 47 100.0 30 ............................................... TACGAACCGCGGCAATAATCGAGAGATATA 207393 47 100.0 30 ............................................... TCCGGTGCGGTATCCGCCTAACTGAAGCTA 207470 47 100.0 29 ............................................... CCACTTTTGGAAACGCCATAAAGTTATAT 207546 47 100.0 30 ............................................... ATTTTAAGCGTTATGCAGTTGTTCGTATTT 207623 47 100.0 29 ............................................... CAAATAAAGAATTTAATGAATACGAATGG 207699 47 100.0 29 ............................................... GTGAGTAAAAATAATTCAAACTCCACTCA 207775 47 100.0 30 ............................................... TGCGGACGGACTTGTATCACAAGACAAGTA 207852 47 100.0 29 ............................................... GCACTAACGCCAATTGTAACACTAGGACA 207928 47 100.0 30 ............................................... AAAATTTCCTATATTACGTATTGAATATGA 208005 47 100.0 29 ............................................... GCTCAAAAAAGAGCCTATGAAATGTGGCA 208081 47 100.0 29 ............................................... AGCAGCATGCGGAAAATGTTACGAATGTA 208157 47 100.0 30 ............................................... AAATTACGAATAATCGAAGCGGGCGAAACA 208234 47 100.0 30 ............................................... ACGGACATTAACGAGGAAACCGAGCGCACA 208311 47 100.0 30 ............................................... GCAGCGGAACGAGGGAATGCACTGTACGTT 208388 47 100.0 30 ............................................... TCTACTATGCACTTTGTCGGTATAATAACG 208465 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 30 47 99.1 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGAATACAGC # Left flank : TTCGCACCTCTTTACTCTTTGAAAGAGCAAATCATGCAGAGTGACAACAGTCTGATTCAACAGACAGTGGGTACCGCTTTTGATATGTGGCAGAAATTCGCGTTCACTATCGTATTGATTTCCTCCTTCATCCTACTGTATCAGAAAGCTAAGTTTCAAAAAGCTGTTTCCAGCCTCCGCTTTTACGGCAAGATGAGTCTGACAAACTATATTTCCCAATCTGTTCTGGGTGCCATTATCTATTTCCCATTCGGATTTTATCTGGCTCCTTACTGCGGATATACTCTAAGCTTGATTATAGGTATTGTTCTTTGTATCTTACAGGTTCAGTTCTGTAAATGGTGGCTGTCCGGACATAAACAGGGACCATTGGAGACGATATGGCATAAATGGACTTGGATAGGGAGCAAATAATACAAAAAAATGTATGAATTGAATAATTTGAACTATAGAACAACATATTATGGTATTTATACGGGACAATTAGGTTTTGTTCTGTA # Right flank : CACAATCGCCATTAGCCGCTGTATTTCAATAAGTTAGATCACAATATAGAAAAAGAAAATGAGCTGTAAATTCATTAAAAAATCCCGTAGTCTTACGGGATTTTTTATTCAAAATAACTCTAATTGTTGTCCTGGTGTATTAACAGATAATATTTTCTTCCCATAAAAGAGTTCAATATTCTCAAATTGCTTATCAGTTATGCACATTATTCCAACCTGACCATATTCTGGCAAAAATGATTTTATTCTTTTTATATGAACCTCAGCATTCTCACTACTTGCACAATGACGAACATAAATAGAAAATTGAAACATAGTAAAACCATCTTTCTGTAAATTCTTTCTAAAATCGATATAAGCCTTTTTATCTTTTTTAGTTTCTGTTGGCAAGTCAAAAAGCACTAATATCCACATAATACGATATTCACTAAAACGATCCATTACTTCTCAGGATAAATAATACGACGAAGCTCTCCAGTAAAACATTTATAAAGTGAAGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGAATACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //