Array 1 155907-156484 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOQB010000005.1 Actinomyces trachealis strain zg-987 Scaffold5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 155907 28 100.0 33 ............................ CTTGGGGGGCTCCTGGCGGACTACGCTCCCCTC 155968 28 100.0 33 ............................ GGAGGCCAGGGTGGTCGCCATGGTGACGGCGGC 156029 28 100.0 33 ............................ TCGGAGTTCCTGGCCACACTCCAGGGGAAGACG 156090 28 100.0 33 ............................ CCCAGCCGACCGCTGACCGTCGGGGCCTTCCAG 156151 28 100.0 33 ............................ GTTCAACGAGGCGGACTGGACGGCCCTGGGAGC 156212 28 100.0 33 ............................ GCTAAGGCACGCGCGGCTCAGACTCGGGCGGAC 156273 28 100.0 33 ............................ GGGATTGCGCTCGACCGGCCGACTAGCCCTCGG 156334 28 100.0 33 ............................ CCGGACACAGATGTCCTCCCGCAACCGGACACA 156395 28 100.0 33 ............................ GTAGTGGCGGAGTTGGTGCGCGGTGGCATCGAC 156456 27 92.9 0 .......................-...C | GC [156478] ========== ====== ====== ====== ============================ ================================= ================== 10 28 99.3 33 GTCGGCCCCACGTGCGTGGGGGTAGAGG # Left flank : GTACTGGGCCAGGAAGGTCGGGGCCGCCTGGAGCGGCAGGTGCTGCGCGCTGTGCTGGTGCGCGGTGCTCAGCCTGCCAGGGAGATTCCTTTGGCTGTGCGGGCGGGCGTTACCCAGGTGATCGCCTGTGAGCCGCGGGTGATGACCTCCTTGCCGCGTCTGATTAGGGCCATGACGGCGGTTTCTAGTACCTGGACGAGCCTGGTGCCCGTACGCCGAGACCCAGGCCAGCTCCGTGAAGAACTGGAGGCCTTGGCAGCCCGTCACCAAGTGCGCCTGGTAGATGCAGGACTGCACCGGCACGCCTGCGCTGAGGTTGGGGTGACCGCAGGCTGTGACAGTGGGGCGCGGCATGTGACACTACGCTTTGATGCGGGGGTAGCTGGCCCGGTGGTGCTTGGCGGTGTAATGATGTCCCCGATGGGTGCATCCGGGTTGGCAGTGAATCCAAAACGCCGTTCCGCCCCGCGCAACCGTTGAAATACAGCGGCTGCCGAGGG # Right flank : CACGGGGCAGATTCGCGGAATTGCAACGTTTCTCTGAGCTGACTGCGCCAGCGTTACTCTAAGTGCTGCATTTCCTGACATGCTTCCCCGGGCCCTCCCCGGCTTAGTACCCCACAGGCACTACTGGCCACCTCGACACCCGAGCCCGCGCTCGACACCCTGGTTGCCGCAACTGGGGTGTCGAGGCCAGGTTCAGGTGTCGAACAAGCTCAGCCGCCGATGCTGCACGCCACGCAGACCACCCACCCTGCTGCCCGCGCCCCATAGCAGGAAACCGCTCTGCTCCTCCGCCAGTGACCAGTTTCCTCGGAACGGCAAGCGTCAACGACGCCGCGCCAGCACCGCTGCCGCCACCAGCAGACCGCCGATAGCCGCTACCAGCCACCAAGGAACCAGGCCTGCGCGTGCCAGTACCAGGTCCTCCAGCTGGGCTAGCCGCTGCACCGACAGCAGCCCCCCACCCAGGCCCTGCGGCCCGACCGTCACCATCAACAGCCCTA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCACGTGCGTGGGGGTAGAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 42502-39233 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOQB010000008.1 Actinomyces trachealis strain zg-987 Scaffold8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ==================================== ================== 42501 28 100.0 33 ............................ CAGTCTGGGCAATGGCCTCAGCAACAGTCTCTC 42440 28 100.0 33 ............................ TGCCTCACGGACGAGATCACGGTTTTCGCAGAC 42379 28 100.0 33 ............................ TGGTGGCTTTGTCTTGGAACCCGAGCAGCAGAG 42318 28 100.0 33 ............................ GATCAGCGTTCACATCGCGCGCCAGAGAGAGCC 42257 28 100.0 34 ............................ GTTCCTCGACGCTCTCGGTGTCCTCGTCAAGGTA 42195 28 100.0 33 ............................ TGCCCGTGTTTTCCAGGATCAATTTCCTGCTAG 42134 28 100.0 33 ............................ GGTACCCTTGCCGTTGTTGCCGATCTCGGACAG 42073 28 100.0 33 ............................ GTCCTCTTTCGTGGAGGATCTCGCCCGTATTAC 42012 28 100.0 33 ............................ CCCCAACTGACCACACAAGGTCGGACACGACGC 41951 28 100.0 33 ............................ CAGTCTCTCCGAGCTGGAACTTCGCGGTGAGCT 41890 28 100.0 34 ............................ GACCCCCGCTGTTCATGCCGTCTTGTCGTGTCGA 41828 28 100.0 33 ............................ GTAGCCGTACTCATCGCTGCCACAGATTGCGCG 41767 28 100.0 33 ............................ CGACACCGGGATCCGTCTTGGCACTTCCTGTGG 41706 28 100.0 33 ............................ CGTCGGTCCCGTCGAGACGCAGGTCTAGCGTCA 41645 28 100.0 33 ............................ CGTCGTGGGCCTGTGGGCTGATCCGTCGCACAC 41584 28 100.0 33 ............................ CGCTTCACGGACGAGATCACGGTTCTCATAGAC 41523 28 100.0 36 ............................ CCCCCCCTTGAACTGGTAGGCGATTGGTGTTTTGTT 41459 28 100.0 33 ............................ GGCTCAGGGACGTTAATAACCTCAACAAATTTT 41398 28 100.0 33 ............................ GTGAGGGCATATCAGGGCCTTTCAGGGGCTGGT 41337 28 100.0 33 ............................ CACCGTCTTCCTCAACACCATCGGCATCACAGC 41276 28 100.0 33 ............................ CACCGACTCCGTCCTAGAGCACCCCCACTGTGC 41215 28 100.0 33 ............................ GCCGAAGGTAACCGGCGCTATCGCCGCCGCCCC 41154 28 100.0 33 ............................ GGTCTTGGTGAACGGGATGATGAGCTGCCTACG 41093 28 100.0 33 ............................ CCGGGAGTTTCGGCGGGCGTCATTGACCTTGTC 41032 28 100.0 33 ............................ GTAGCCGTACTTATCGCTACCACACATCACGCG 40971 28 100.0 33 ............................ CGATCGCTGAGCCGATGGCCCCGGCGCTGGCGA 40910 28 100.0 33 ............................ GGTGCGCACGCTGCCCATCGGCTTGATGCCCAG 40849 28 100.0 33 ............................ GATCTCCGTCTGGGAGGTGACGCCCACAATGTC 40788 28 100.0 33 ............................ GAGGTTCATAATCAGACCAGTCGGGTTGGACGG 40727 28 100.0 33 ............................ GATCTCCGTCTGGGAGGTGACGCCCACAATGTC 40666 28 100.0 34 ............................ CACGATAACCGTGTGGTCTATGAGTGATTCGTGA 40604 28 100.0 33 ............................ GGTCGTTGAAAAACGCCCTGTCCGAGGCGTAGC 40543 28 100.0 33 ............................ TTGACCCGGGCGATCTCCCCCGACGGGGCGATG 40482 28 100.0 33 ............................ CCGCCACAGGATCCAACCCCCTGGCCACCATCT 40421 28 100.0 33 ............................ CGTGGTTTTTCCCGCCGCGTTGATCGCCGTGAT 40360 28 100.0 33 ............................ GTCAGCGGACGCCGTAAGATCCGCAAGCACCGC 40299 28 100.0 33 ............................ TGGTTTTCGTGAAGGTCGCCCAAACCGCCGACG 40238 28 100.0 33 ............................ GGCGTTGTGTCCGCAGCGCAAGATGATGAGGAA 40177 28 100.0 33 ............................ GGTGGGTTCTTCGGAGCCTACCGAGGAGATGGC 40116 28 100.0 35 ............................ CCCCCCATCTGCGTCATGAAGTCGGTGGCGATCGC 40053 28 100.0 33 ............................ GGCGTACAACGCGGCTCTGAGAGCCGGGTGGTC 39992 28 100.0 33 ............................ CTCAGATCGCTCGTTGAGGCGGGCCGAGAGGGT 39931 28 100.0 33 ............................ TCCCTCTGCGGCATGAACGGAAGTGAACGCACC 39870 28 100.0 33 ............................ CTGGTCCACGAAGCGCGCGATCTCATACCCCTG 39809 28 100.0 33 ............................ GCGCATGGCGCCGGACCTGATCATGGCGCGCAT 39748 28 100.0 33 ............................ CGGGGGTCTGATCACCCGTTTTGAGGGGCCTGA 39687 28 100.0 33 ............................ CATGTCGAAGACGGACGCCTTGACAGCATCGTC 39626 28 100.0 33 ............................ GGATAGCTGCCAAGACTCGCCGACTACGGGGGC 39565 28 100.0 33 ............................ CCGCTCGGTCATGTTCATGTCGATCTCACCGTG 39504 28 100.0 33 ............................ CCGCTCGGTCATGTTCATGTCGATCTCACCGTG 39443 28 100.0 33 ............................ GGATAGCTGCCAAGACTCGCCGACTACGGGGGC 39382 28 100.0 33 ............................ CATGTCGAAGACGGACGCCTTGACAGCATCGTC 39321 28 100.0 33 ............................ GGATAGCTGCCAAGACTCGCCGACTACGGGGGC 39260 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ==================================== ================== 54 28 100.0 33 GTCGACCCCGCACACGCGGGGATTACCC # Left flank : GGTTGTGGCAGGTGGCGCCAACTACGCCGAGGAGGAGGCTGGCGGATGGTAGTGCTGGTGCTTTCCGCGGCCCCGGCCTCCTTGCGGGGCGCCTTGACCAGGTGGCTGATGGAGGTCTCCCCGGGGGTGTTCGTCGGGCACCTGTCGGCCCGGGTCCGTACACAGCTGTGGGACCTGGTGGGTACCTATATCGGTGATGGGCGCGCGCTGCTGATCTGGTCCACACGCGGTGAGCAGCGGTTTGCCGTGAAGTCCTTGGGGCACGAGAAGGAGCCTGTTGATATGGAGGGTTGCCTGGTGATGCGTACCCCTTACGCCCACCTACCAGGCGGTCAGACTCCGCGGGAGATCGGGGCGGGGAGGGCCGCTCCTGAGTCCTGGTCCCTGGCGGCACGGCGACGCCGGTACCGCAGCTACGCCGAGCGGGCCCTAGGTCAGCAGTGAAGGAAACTGCCTGAGGTATTATGTCCTCAGCGTTGGGATTCCGCCGATCGCCAAGT # Right flank : CACCACTGGCCAGAAGCCCAGCGGATCGCTCGACTTCTGGGAGAAGGCCGAGCGAGCTCTGCTGACGGCCCTGGTGCCCTTCGTATGGTTCAGCAAAGGCAGGCAGGGAACCCTCCTCGACGTCGTCGACATGCTGGCCGACATGAGCGCCTCCGAGCAGGACGAGAACGCCATGAGCAAGACCGATGCCCTCTTCGTGGCCACGCAGGAGGAGATCGACGACTACGACACCGACCCGGACGGCTACGACTCCGAGGCCGCCGCCATGCTTGAGGGACTGCGGTTCAGCTGCGCCCAGTACCACACGTCTACACGCAGGGAGCGGGGGGAGACCAAGAAGTCGATCATCATCTCCCTGGGCGTGCGCCTGGCACCCCTGCACATGTCGCCCGTGCACCGGCTCCTGGCCTCCGACACCATCCGGGCCGACGCCCTGGGCTCCGAGCGCACCGCCCTGTTCCTGGTCGTACCCGACACGCACCAGGCCTTTAACTTCCTCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGACCCCGCACACGCGGGGATTACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.01 Confidence: HIGH] # Array family : NA //