Array 1 20437-18085 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJZK01000014.1 Levilactobacillus zymae strain NBRC 107157 sequence14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 20436 29 100.0 32 ............................. ATTTCGCTGGTTTGGCCCCGTGTTGGTTCTCG 20375 29 96.6 32 ............................C GTGCTGAATTGGTGGCTAGATCCACGTATTTT 20314 29 100.0 32 ............................. GCTCTTGGCGTTTCTGTAGATTACTTGTTGGG 20253 29 96.6 32 ............................C CGTTTCAATGGCCTTGATTAAGGCCTCTCCCT 20192 29 100.0 32 ............................. AAACAACTCATGCAACACGTCCTGGTCAGCCC 20131 29 100.0 32 ............................. AGGTCAGTTGGCTGTGCGTTAGTGACGCTGAA 20070 29 100.0 32 ............................. AAGATGCTCATCTTTAAGCCTTTGAAGATAAT 20009 29 100.0 32 ............................. CAAACCCCTAAGTGGGCGAACGACAAGGATTC 19948 29 100.0 32 ............................. AACTGTACAAAAAAAGAGCCACCCACCTCGGT 19887 29 96.6 32 ............................C GCTGGTAGTAGTCTTGGTAAAGTCGCTTGGTA 19826 29 96.6 32 ............................C ATGAGTCGTATACATCGGTTTGCCAGTATCTG 19765 29 100.0 32 ............................. TTATTGGCTTTGACGTCCGCCATGTCCTTCAT 19704 29 100.0 32 ............................. GAAGGCGTCAAAAAGCAGCTAGTAGAATTGAA 19643 29 96.6 32 ............................C GAATTAGCAATCGTTTCACCTTCTATCAAAGT 19582 29 100.0 32 ............................. TTATCGGGACATGAATAAGTCGCATTGGCGGC 19521 29 100.0 32 ............................. GATGTGGTTTCGCGCAATCGGCTGTATGGCAT 19460 29 100.0 32 ............................. AATGATGACGAAATCCTCGATATGCGAAATGT 19399 29 96.6 32 ............................C TTTCTGTCATGATTTTTGTAAATCGACTTGGA 19338 29 96.6 32 ............................C GGCTTATACCCACTAGATTGAATTTTCTCACC 19277 29 100.0 32 ............................. TCGAAATGTTGATGGCATCGCGCCCCGAAATC 19216 29 96.6 32 ............................C AGAAGCAATTATGGGTGAATTTGGTGCGAAAG 19155 29 100.0 32 ............................. CACCCCGCCGAACGCCAAGGTAACTATTGAAC 19094 29 100.0 32 ............................. AATACATCACTTTAGGTGATATTTCAATCACT 19033 29 96.6 32 ............................C AGAATGCTGTGAAGCGCGTGTGCCAGTCCAAC 18972 29 100.0 32 ............................. AATTAACCTCTCTTTATTAGGATTGATAGAAG 18911 29 96.6 32 ............................C CGTTGATATGACGGGCAGGGCCTTTTTGCATT 18850 29 100.0 32 ............................. AAATTCCGGCGTAAGAGTTCCGGCGGCCAAGG 18789 29 100.0 32 ............................. AGGAGGAAACATTATGAATTTTGGTAAAGCGC 18728 29 96.6 32 ............................C CGGGGACTACACGGCAGTCAGCCACGGGGTGT 18667 29 96.6 32 ............................C TCCAAGACCAGTACACCACGGTAAAGGGTTTG 18606 29 100.0 33 ............................. CGCCACGGTGAGCAATTGCGGAGTACCTTCTCG 18544 29 100.0 32 ............................. ACCGAATCACGCAGCTCGCCGCAGCGGTCACG 18483 29 100.0 32 ............................. CTTTGCCACTGATCAGAATGGCAAGGAAATCT 18422 29 96.6 32 ............................C GACTTTTGAATAATTACTTCTCTCATGATAGC 18361 29 96.6 32 ............................C GGATTCGCTGATTATAGACCCGCTTCATTGTC 18300 29 96.6 32 ............................C CAAATGCAAAGCTTCCCATTAACCACGCTAAA 18239 29 100.0 32 ............................. GGCAACTTCCGGTTCTCCCGGAACTTCACCAA 18178 29 96.6 33 ............................C TCCGACCACCGGCTAGCCGGCAACGTATACTTT 18116 29 89.7 0 .......................A...GA | TCC [18090] ========== ====== ====== ====== ============================= ================================= ================== 39 29 98.3 32 GTATTCCCCACATGTGTGGGGGTGATTCT # Left flank : GAAGATCTACCCGGTTTACAACAACGTCTTTAACGATTCGGCCTTAGCCAAGCAAAAGGGCACCACGGCCGACATCAGTGACCGGCGGGTAACCATCACCCACCGGGCCTACCGGATCGATTCCAACGGTCACCAGACGGTTTATTACCAGATGGAAAACGGACTGTGGACGCGGGCCAGTGCGTTTGATTTGAATAGCTAATATAAAGCGATTGAGCCGCTATAAACTGCGACTCTAAATCATGATTAGGTGTCGTTGGTGTTGAGCCAGCGACACCTTTTTGTCGTGGTGATTAGGATTAAAAAATAGGCTAAGTGGCTGGGCGCTTGATGGTCAAAATTAATGCGACTTAAACCGAGATTATGCTGTAGATGGATTTATTGAAATCGTTAACAACTATTGATAAAATAAGTACCGGAATCATATATATTAAAAGCAAGTTAATGAAAATACGTAACTAGTTCGTTTTCAAATGGCTTGATGCCGGGATTTGTTTAGT # Right flank : AAAAATGGCTTCTTGTCAATCGGTGTTGATGAGGACTATTATGAGGATCCAATTCATTTACGAATTGGATTTTTTTGACTTTGATTTTAACGGCGTTCTCCTCAAGATTTGATTCTTTGGTCCCAACTTGATATTGATCAATTTTAAACCGGGGTTTTACCGGTATACTAGGTTTTGTCACCACGGCGGAAACGAAGGGGTGAGGCAAGTCATTGGCGGACTGGCTTTCAATTGAGCGCATCTTCAAGAAAACTTCACGTTTCCGGCAAAAAGTCCTCTGATTCGCCTGCTAAAGTGGGGGTATAGCCTTGAGAAACCCGATTTTTTCAATTAAAAATTGAGAAAAGGTTAAAAGGTCAGTAAGTTAAGACTAATGGGTTTCATCATTGCCGATTGTGGTGTACAATTATTAACATAAATTAGCACTCAAACAGAAGAGTGCTAAAATCTCAGGTACCTCATCGACAAGCACATCATTGGAGGGCGATTCTATGATTAAA # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.93, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACATGTGTGGGGGTGATTCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 23781-24114 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJZK01000012.1 Levilactobacillus zymae strain NBRC 107157 sequence12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 23781 29 100.0 32 ............................. CATTGTTCGGTTCTTGGAATCCATCACCACTA 23842 29 100.0 32 ............................. TACTTCATGCTTGCTCCTCCTCGTGAATCTAT 23903 29 100.0 33 ............................. CAGATGGGGCCGCCGCCATTTTAGCAGGCGGCC 23965 29 96.6 32 A............................ TGGCGTTCTAACTGGTGCGAACATCACGCAAG 24026 29 100.0 32 ............................. TATACAAGTATAAAAGTCTAAACACTGCCGCC 24087 28 82.8 0 A..........T....A.-.......A.. | ========== ====== ====== ====== ============================= ================================= ================== 6 29 96.6 32 GGTATTCCCCACACGTGTGGGGGTGATTC # Left flank : GTGAGTCCATTGTGATGGCTTCCTTTCATAAACGAGAAAAATTTAGTTACCGTAGCGTGTACTTTACTTTGGAAGGCCAAGAAGAGGATACCGACCGACCAGGGCTAGACCGAATTTTAGTATCGGTTCACTACGATACTGATGAAACACGGCAAGCTAGCCATGATTTCATGGAGTTCGCTGAGAGGACCTGTCCGGTAATGGATAACTTGACCAATGCCGTACCGATTACCCGCACGGAAGTCACTACAGAGACATCCAGTCGAGAAACCATTGAAAGCTAGAGCATGAATTAAAAAATGCCGTTTGATCGTCTTGATCAGCGGCATTTTTGATGGGACTAACATGAAAGGGGTAGCTTGACTGAGCTTAAAGCTATAGCTAAATTTGTAAGAGATGTAAATTGAGATGAGAATTGAAACCATGTAGAATAAAAATGAAAGTTAACGAAAAGTGAGTATTTTATAATCTATAAACACTGCTACAAAGGGATTCGTTTA # Right flank : CCATAAAAAACACCTATGACATGCCACTAAATCGGCAGTTCATAGGTGTTTTTATCGGTCTCATTGCGGCCAAGCCTGACTCATCATCTCGAGTACCGGCGCTACCCGTACCCGTTCTGTCTTCAAATAACTCCCGTAAATCGGCATCTGCGCGATGTCGTCACTGATGGGGATGCGGACGCGGTTATCGTCTTGGCTGACCGTCGGGGCGTTGGGGTCTAGGGGCGAAAGATTCGTACTGAAGTAGGGAAAGTCGGCGTATTTGGTAATCTTGGTAAAGGCGTCACGCTGGGCTTGGTACATGAACTGCGCATCGGGAATTTGATCCTGGATAATGTCGCGCCAGATTCCAATGTCTTGGAGGACCAGGAAACTCAGGCCGCGTAATTCTTTAAATTGGATCGTGGGTTGGTTGGCGTGGTACATGAATTGATCCAGGTTAACCGCTAGGCGTTCGATGCCCAAGTAGCGCGATTCCACGGTGTTCGTCAGGAGTTCTT # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTATTCCCCACACGTGTGGGGGTGATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-11.70,-11.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 1 68048-69337 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJZK01000016.1 Levilactobacillus zymae strain NBRC 107157 sequence16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 68048 36 100.0 30 .................................... GACGCCGACACCATTAGCGCCATTCAAGCC 68114 36 100.0 30 .................................... AATCCGGTAAGAACATGGCCCGCCCGCAAT 68180 36 100.0 30 .................................... AAGGACGACCAACCCGACGACGCGGCCATC 68246 36 100.0 30 .................................... AACTGGTTCTCGCGGCCGTAAGTGCCAGTT 68312 36 100.0 30 .................................... GGCCACCGTGGCCCGCGGGGCGGTAAGGCC 68378 36 100.0 30 .................................... CAATTTCACCGATAGCCAAAACCCACACTA 68444 36 100.0 30 .................................... AATGTCGGGATGTTCCTTGCACCACACGGC 68510 36 100.0 30 .................................... GGGCCTATGCCAGTCAGTCCGGCACGTCTA 68576 36 100.0 30 .................................... TTTGCGGAGTATCGCTATAGCGGCAAGTAC 68642 36 100.0 30 .................................... GTCTTCGTCGTCCATGATGTCCAGGGCGGT 68708 36 100.0 30 .................................... GGTCGGTGGCGTCATTGGCGATGACCTTAG 68774 36 100.0 30 .................................... GATCGTGATTTCCCAGTCTTCCAGCGGGTT 68840 36 100.0 30 .................................... ATGAAGATGATCGGCACGGTCAGGCCACCA 68906 36 100.0 30 .................................... GCCGGGGACCCGTCCACGCTACAGCCTGAG 68972 36 100.0 30 .................................... AGCGATTGAACCTAGCTATTCGGGTCTCAA 69038 36 100.0 30 .................................... GTCACGGCCAAGTGTAACCGGCCGGTGTCC 69104 36 100.0 30 .................................... ATGACAACAACGACCATTGCCGTCGGTAAC 69170 36 100.0 30 .................................... GTACGAGCCCCCACTGGGTGACGAACTCGT 69236 36 97.2 30 A................................... GTAAAACCGCGCCCCTTGCAAGGCGCGCCC 69302 36 72.2 0 .C.....................A.TA..T.CGCAT | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 98.5 30 GTTTTAGATGAGTGGTAAATCTAGAAGGTCAAAAGC # Left flank : GAGTTGGATTTAAATGCGGTATTTCAACGGAAACTGCAGGTACAGTTGTTGAAAGTCTTGTCTGACCAGCAGACGGTTCAATTGACGGATCAAGTTCAACAATTATTGACACAAATTCTGGGGGATAGTTATGTTTTGGATGTGCCGTTGGGGATTCCGGAGACGCCCGAACTAGCAAAATTAATGAAATTCAGTGGTCTCAAGATTGACGGCATAGCCGATATGGGGATTCATGGTATACTGGAAACGTTAATTAAGGTATTAGTTGAATTAAACGATCGGCACACGGTCGTGTTGACCAATGTTAGCCACTACTTACAGGTCGCTCAATTTAAATTATTGAGTAAAGCGGTGGCGGACGCAGGTTTACCACTCCTTATCATTGAATTCTCAGAAATCCGCCGTCAGCAAGTATTTGAAGATTGTGACTATCACTACATCGATAGTGACTTTGTTCTCTGGTAGCTGATTTAGTATGAGAGAAGCATTATAGAACAATG # Right flank : TCAATCACAAAGTCTTAAAGTAGTTCTAACTCTAGACCAAACGAAAGTCCCGCACTTCAAAATCGGTGCGGGACTTTCGTTTGCTCTAAAAATCTAACTCGGTTGATACGCCTGCGCCACCTCTTCGGCCGTGGGGTAGGACTTCTGCGTCCCACGCCGGGTGACCGTTAACGCCGCGTAAGCGTTGGCGTGGTGCAGCGCGGTCGGCACGTCCTCGCCCTGGGCGAAGTAGTGAGCGAATGACCCGATAAACGAGTCGCCAGCCCCGGTAGTGTCCACCGCCTGGACCTTGACGGCGTCGATCAGTTGGCAGTCGTTGGCGCAGACCCACAGCACCCCCTTGGCACCCAACGTGACCAGCAAGTTTTTGACACCCAGGTCAATTAGATGGTGGGCGGCGGCCTTAATTTCGGTCAGGGTCGTGGTCGGCATGCCGGTCAGCGTCGCAAGTTCCGTTTCGTTCGGCGAGAAGAAGTCGACCCGACTGACGTGCGCCAAAT # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGAGTGGTAAATCTAGAAGGTCAAAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 68517-68853 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJZK01000017.1 Levilactobacillus zymae strain NBRC 107157 sequence17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 68517 29 100.0 32 ............................. TTCCGGCCAGTGCCTTACCACGCAGCATCATG 68578 29 96.6 32 ............................C GGTGCATATCGACCAGTGTTCTGATCCACATA 68639 29 100.0 32 ............................. CAGGGATAGGCGTCCGCCCTTAGTTGCGACAG 68700 29 93.1 34 ...C........................C GAACGTGTATTGGGTGACGCGGGCGCTCCTGCTA 68763 29 100.0 32 ............................. GAGGAGCTGACACCGGCTTATCTCGTTCAGAA 68824 29 93.1 0 .....................A......C | G [68837] ========== ====== ====== ====== ============================= ================================== ================== 6 29 97.1 33 GTATTCCCCACACGTGTGGGGGTGATTCT # Left flank : CCTTTGGCGAAACGCCGCGTACTGGTTGCATTCCGAAGACACGGACCGGCTTCACGCTGAGAGTAACCTGATTGAACGGCAAACGGCGAAGGCGGCCATTAAGACCTTGTCGCAGTATCTGTCACGCACGGACGTGGACGAAACGCAGTTCGATAACCAGGCGATTTATCACCTGATTGTCCACTACCGTAACCGGATCGAGCGGGCCAAGGCGGCCGCCGCACCGTCACACGAAGAGGAGTACCAACACCAATTCAATAAATTGCGGGTCCGGGCGTTGAGCGCCGAACGGACGGGAATTCAGAACTTGCTTGAGGCGGGCAACATTTCCTGGGCCATGGCGTCGCGCTTACGGCAATACGTCAACTATGCGGAAAATGTGTTGGTCATGTCCTTGAGTAGTGACGAGGGCGATTAACGGGTTGAACCACCGTCGGCAAGTTAATAAAAAACGGCGATTGGTGCAATCCTAAACGTTGTTAAACCGGGATTCGTTTAGT # Right flank : CCAGCTCGGCGCCAGATGCTATCTGGCTAACTGGTATTTCCCACACCTGTGGGCATCAAAATAGCACCAAAAAAGAAGCCATCAGCGAAATTATTCGTTGGTGGCTTCTTCGTTTGTCATTTAAATGGTGGTGGGTTTCTGTGCGGTCATAATCAGATGTAAGATCCAATAACAGAAGAGCTGGATGAACGTCATCAGAATCACGAATATCCATAAATCATTCGTCCACATGTTCATTAAGGGCCTGATGAATTGTTCCGGATTTAAGAACAGGTAGATGGTATGGATGCGGAGGAAGCGGCCGATGTAGACCCCGACCGACGATAGGAAGGTCAACGTCAAAACCACGAATAACCGGACGATGTTGTTTCCACGAGCCAGCCGCTCCGAGATGCTTTGACTCACAAAGTTGAGACTCCAGAAGCCCAGGAACGCACAGAACAGGGCGCTGGTAATCAGGTAAGTAAAGTAGATCCAGATGTGAGGCGTGACCCGCAACA # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACACGTGTGGGGGTGATTCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGCATGTGGGGGTGAACCG with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 64467-64802 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJZK01000010.1 Levilactobacillus zymae strain NBRC 107157 sequence10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 64467 29 100.0 32 ............................. GTATCGTCGATACGCTAGCTGTCCTGGTGTCA 64528 29 100.0 32 ............................. GACCGGGGACCAAACGGACTATGCTAGGGCAA 64589 29 100.0 32 ............................. CCCAGTGTCTTTAAAAATCTGTTTTGCGGAGA 64650 29 96.6 32 ............................T TGTACCTACTTGACGTTTTATTTTCAACCAGA 64711 29 86.2 33 .............A..........GAC.. TTATCATTGGTCTATGTTTGTTGTACATGGCTT 64773 29 89.7 0 A.......T...................T | A [64791] ========== ====== ====== ====== ============================= ================================= ================== 6 29 95.4 32 GTATTCCCCACACGTGTGGGGGTGATTCC # Left flank : TCGGCTTTTTCGTTGCCTTCCTGCCGCGATTCATTCCGCTGATGCTGTTTACCAAGCGTGAGATTCCAGAGTGGTTTAACGAATGGATGAAGTTTGTCCCCGTGTCGCTTTTCACGGCTCTGGTAGTCAAAGATGTGTTTATCGACAGTAAAAGTTACCAGCTGATGTTCACCCAGGTGCCAGAAATGTTGGCCGCGGTGATCGTCATCATCATCGCGTACCGCACGCGCTCAATGGCGCTTTCCGTGATTACGGGACTGATTGGCGTGTTTCTGCTGTCGATGGTGATATAAATAAATTTAGTAAATCCGTTATATCGGCATCATCCACTCTCCTGAGAGAAGTGGGTGATGCCTTTTTTTATTAAAAATGTAATTAATGGGGTATTCGTATCTTTGATTGAAAATAGAGCGCATTGCAGGTACAATTAATGAAAACAAGTTAATGCAAAACTGCAATAGACGAGATTCAAAATGCTGCTATGACGGCTTTTGTTTAGT # Right flank : TCATTGATTGCATTAGCTGAAATTATTATCGGTCTGTGTCTGCTGTATATGGCCTTTTCTGTACTAACTGGTCATTAAAAAGCTTACCCACTACGCTGATCAGACGTAGTGGGTAAGCTTTTTTATGATGTTACGGTCCGCGGCCGCAACTAGTTTATCGAGTTAGTCAGTTACTTTATCCGTTTCGGCGTACATGTAGTCCCGCGTCATCGGTAACATCCGGGCGGAAGGCCCCTTGGAAATCAAGTATTGAATTACGTCGATGTTACCGGACTTGAAGGATGCTGCACAGGCCTGTAAGTACAGGTCCCACATGCGGACAAACTTGTCGTCGAACATCTTGGCGACTTCTTCGCGGTGTTGATTGAAGTTTTGATCCCAGATTTCCACGGTCTTTTGGTAGTGTCGGCGCAGGGGTTCCATATCATCGATTTGTAAGCCGTTTTCGATGATGTGGGTCGTGTTTTCCACCAGACCAGGCACGTAGCCACCGGGGAAAA # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACACGTGTGGGGGTGATTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGCATGTGGGGGTGAACCG with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //