Array 1 70922-71763 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNPF010000005.1 Enterocloster bolteae strain 1001287H_170206_C8 NODE_5_length_150836_cov_32.4819, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 70922 33 100.0 36 ................................. AATTGTAATACCTTGATATAATGCATCCAGTTTTTC 70991 33 100.0 34 ................................. AAGGATATAGATACAAAAATATATTAATAAAAAA 71058 33 100.0 34 ................................. AAAACATAAAGGGGGATTAAGATATGAAGTTTAA 71125 33 100.0 35 ................................. TTTCTAGCAGCGATTATGTTGCATATGCTGCACAA 71193 33 100.0 34 ................................. TGGTTTTCCACTGCAATGAATTGAGTCGGTATCG 71260 33 100.0 35 ................................. AATAGGCGCAAGTGAAGGAGGGCGAGAGGAAGTCA 71328 33 100.0 34 ................................. TTGTATAATCCCCCACCCAATCACCATGCCAAAA 71395 33 100.0 33 ................................. ATGATATTATCCAAAGCTTTATTGGTTAAATAT 71461 33 100.0 34 ................................. TCGTTGCAATGGAGCTTTATTAACTTTGTAACTA 71528 33 100.0 35 ................................. CTGCTTATAAATCTGCTGCATGGTCAGGTCAATCT 71596 33 100.0 35 ................................. ATTACCTGTGGGCCATTTTCAAGCCACGATTCCTT 71664 33 100.0 34 ................................. AATGAAATGATGTCGCTTGTATCAACATCATATA 71731 33 78.8 0 ...C..................CA..CCA...G | ========== ====== ====== ====== ================================= ==================================== ================== 13 33 98.4 34 GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Left flank : AAGTTCTGGAACTACCTGAAAAATGTGGATTTCTGGCAGTGGCCGGAACAGCGGTGGCCCTGAAGGCGGGAAAGCTGGCTGCTGTAATGGAACGCCAGGGCAGAGTACTACGTATTTACGATGCAGAAGATATGAAGGAAGTGATGGCGGAATTTGTCCGTGCGTTCAAGCAGGGAGCCATATATCCGGAACAAAAGAGGCTTGTATTGAAAGAGTATCCATCGGAGGCGGCAGAGGCTTTGCAGCATGCAGGATATATGCGGGAAATGAAGGATTATGTAATATATAAGTAGAGTTGGTTTCTGTGAGTTGGGAGCCCTTCAAACCAGGTGCGAATGCCAAGCTGACATGAAATGCCTGGGAGATTCGCACCTGAAAAACAGAGGAAAAGGCCGTGAAAGCGTGCTGGGTGAATGGACTGAATTGGTTGAACTGGGGAGAGAAGAGCATAATGCATAAAATGTTAGGGGGGATGTGGAGTAGGTTTGGATAATTTTGCT # Right flank : GATACCTGTAAGCCCCTAAATTAATGCAAAAGGAAAATTGCGCCCCGCGTACCTAATGCATTGAAAGCAGCCATAATTATATATTGAGAATTCGCAAAACATCAGTTAAAAGAACATATTAACAGTATCCCGGTCAGCAGGGAATCCGTTAAGCACATACCCCCCTCTGCAAATAACATCCGCCCCCAAAAACACCAACATAAACAAAGGAGTAACACATATATGATTGAAATAATCTATAGAGACAAACGCTTTCTTGTTAAGGGCAGCTTTTCCATAGGAATAGCAGGAAACTATGTAAATGAGGATTTTGGGGATGAGAATATCATGATTAACGATACGTTAGAGGAAATCATGAAAGAATTGCAGGATGAGGACTCCTTTTGGTACAAGCCGCTGTTTCCCTATCTTAAATCTGAGACAGCAGACAGTGGCGGAATAGCCAGAGGTCTTACCGCGTACTACAATCAAAAGGAAAAGGAAATCAGGGAGAATGAAAA # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 30450-29691 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNPF010000042.1 Enterocloster bolteae strain 1001287H_170206_C8 NODE_42_length_56728_cov_21.0242, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 30449 32 100.0 34 ................................ CAATTGATTATCCTGTGGTGATGGAATCTGATAG 30383 32 100.0 37 ................................ TGAGCATGTCGTAGAAGGGACGGAAAAGGCCCTTAAG 30314 32 100.0 34 ................................ TTAATCTGAATCGTACACCGCATGTACTGGCAGC 30248 32 100.0 33 ................................ ATGTACCGGGTACATGGCAGAAAGGAAAAGCTG 30183 32 100.0 35 ................................ AGAATCCCACGAAGTTATATTGTGGGACACAAATA 30116 32 100.0 34 ................................ CAAATAACGGCTATGGTCGTAAATATCCTTTGCA 30050 32 100.0 33 ................................ TTTCTGTAAATCAAACGGTATATCGGATGTTGT 29985 32 100.0 34 ................................ GAATATGTCAAGGTCTGACGGAACAAACTTTAAA 29919 32 100.0 34 ................................ TTTTGATGCAAACATGCTGCCGCCGTTTCCTGGT 29853 32 100.0 33 ................................ AATTATACGGTACTGTCATAAGTTATATTATTG 29788 32 100.0 34 ................................ GGAGAAGAACGTCCGTATGTGCGGGCGGAGACGA 29722 32 90.6 0 ........................T.....GT | ========== ====== ====== ====== ================================ ===================================== ================== 12 32 99.2 34 GATCAGGCTCTCGCGAGCCTGCGGATTGAAAC # Left flank : GAAATGAGGTGATGGATTTGCTCGTACTGATAACCTATGACATTAATATTACTGAAGCCGCAGGGGCGCGACGTTTAAGACGTGTAGCTAAGCAATGTGTAAATTACGGTACACGAGTGCAGAATTCTGTTTTTGAATGTCAAGTAGATGCAACGCAATACGCGAAGCTAAAGCATCTTCTGTTAAAGGAAATTGACGAAGAAAAGGACAGCTTGCGTTTTTACTCGCTGGGTAATCATTACAATGGTAAGGTTGAGCATTATGGCGTACGGCGTGGAATACAGGTGGATGAGCCCTTGATTTTATGAAAAAACGGAAAGAATATGTCTGGGTTTGGCCGTGCGAACCCTAAGTGAACATAAATTCTGTGGGAGGTTCGCACCTGGATTTTAGGGTGAGTTGGAGGATGGTTTGTATAAAGAGGTGAAAAATATTGTGATATTTGGTTGATTGCAATAAAAATGTAATGTGTAAATGCTTTGAATTTGTAAATGTTTGCT # Right flank : TTCAGTATTGAAATTTACACAGAGTCGGCCTGATGTAGGAGTCAATTTTCCTAAAATTTAAAATAGTTTGAAATTAAAGTTCAGGAAGGTAAAGTGTAAAGTAATTCACTACAATCAATAAATGATTATTACTATTGGTTTAAAATGAATAATGACTGTAGCATTAAAGAATATATGCACAGCGTAAGATATATGGATTATACAATTTTACTTATTTCCGATGCGTATCTGAGGTCTAGAAATTGCATGTATGAAGTTTTGGAACTTATGAGAGACCGTATGTATAAAAATAAAATCTTCCCCGCAGTTGTGTCAAAGGAAATATATAACCCTGTAGTAGTCGCGAATTATGTAAAGTATTGGCAGGATGAACAGCAGCAATTAGAGGCGCAGCTGAGTAACCTGCGGATTCAGTATTTAGGAAATTTGAATCAGAAACTGAAAATGATTCAGGATATAGCCTCTAATACCGCTGATTTCCTGGATTTAATTGGTGATAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATCAGGCTCTCGCGAGCCTGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.90,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA // Array 1 12999-13210 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNPF010000089.1 Enterocloster bolteae strain 1001287H_170206_C8 NODE_89_length_16412_cov_26.7569, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ============================ ================== 12999 32 100.0 26 ................................ GGTCTAAGTAATACCACTGTCCGCCC 13057 32 96.9 28 ...............................C CGTCCAGATAATACCATCTGCCATTAAT CT [13062] 13119 32 84.4 28 G....................CT.A......C CGTTCATATAATACCATTTGCCGTTGAT 13179 32 81.2 0 ................AT....ATA...T... | ========== ====== ====== ====== ================================ ============================ ================== 4 32 90.6 28 AGCCTGCCAGCCGGTCTGCATGGCGCCGCTGG # Left flank : CGGACAAGCGCTTTCCCAAGGCCAGACGCGTCCCGCGCACCTTGATGATAACGCTTCCGCTGCCTTTCTTATTCAATATATTTACAGGCGTCCCCTCATTGACCCCCAGGGCCTCAAGACGTCTGGTAATGCTCTCATCCACCTGCACGCCCGATACAACATACCGGCCGCCGATCTCACACTCATTCAGCTTTTTCTGCATTGATGCCTGTCTCCTTTTGTAGTTACATTTAAACCATATTCATTGTATGCTTAATGCGAAAAAATGTCAATAAAAAGAGTTTGTTATGACAAACTCAATTCAAAAAAAGATACAGCGAATCTCTCCGCTGCATCTTTTCCTGCTTTTTCTCTATATTTCTTTATGTTTCCGTTCTGTATATTCGTATTAAGATTTACTGCACCCAGGCTCCTGAACCATCCACATATTTTCCGTCCGGCGTCCATGTATTATAATACATGGCTCCATTGGTGCCCAGATAGTAATACTTGCCATTAAT # Right flank : GAAGGGTTCAGATAGTACCAGGTCCCATCCAGCTTCTGCCAGCCGGTAACAATATACCCCTTGTTATTGAAATAATACCATGCGCCGTTAATCTGTTTCCAACAGGAGGCCGGATATCCGCCGGTATCATACGCATACCATACACCAGTACCATCCTGCTCCCAATGTCCGCTTCCGCCATAGCGGCCAAGCTCATCCTCATCAATATACAGGGAGTTGGAATCCTCGGACCATTCACCTGTCTTATTATTGTAACGGGAAATAGCCCTTACACGGAAGGTATAGTCTCCCTCCCGGTTAAAATAACCTGCAAAATTATATGAGGTTCCTGTAGTGCTGACCGTAGTGACTGTCTTGTCGTCGCGGAGCAGCTTTACATCATAGCTCTTAGCGCCTTCAATCTCCTCCCACTCAGCCGTGGTATCATTCCATTCCAGCTCCGACGCACCCTGAAGCTTGCCGCCGATACGTTTTAACTCAGCATACACTTCAATGTACTG # Questionable array : NO Score: 3.28 # Score Detail : 1:0, 2:3, 3:0, 4:0.53, 5:-1.5, 6:0.25, 7:-0.09, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGCCTGCCAGCCGGTCTGCATGGCGCCGCTGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTGCCAGCCGGTGAGCATGGCGCCGGAGG with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.50,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 53404-54381 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNPF010000008.1 Enterocloster bolteae strain 1001287H_170206_C8 NODE_8_length_136303_cov_34.7474, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 53404 33 100.0 34 ................................. CTCTATCACATCCTCAGAGGAGGGATTTGGCACC 53471 33 100.0 35 ................................. TACTAGGCAGTGTTATTACCAGAAAACAGATGGAA 53539 33 100.0 35 ................................. ATCCGGAGGGGTTATAGTACTATCCCTTAAATAGC 53607 33 100.0 35 ................................. AAATGGAATATTTAGTGCTATTACGTTTGTAGGAT 53675 33 100.0 35 ................................. TACTACACCGACAGAAGATGTCGAGGAACCGGAGC 53743 33 100.0 35 ................................. GATATAGCGGCCCTGTTAGAGCCTATGATAAGCAG 53811 33 100.0 34 ................................. TTATTTTGTTCTTATCCACGTTTTTTAATCTTTC 53878 33 100.0 33 ................................. CAGGTATTTACTATAATTATGGTTCTTTTAGCT 53944 33 100.0 33 ................................. CATTCCATCCTTTTTGCCCTCAGCGTATGTTTT 54010 33 100.0 36 ................................. TCAATCGGCACATGGAACATCTGGGCAGCGGAGGCC 54079 33 100.0 35 ................................. CTTGCCTGGGCGGTCGTCTCTGGAACCACGCATAC 54147 33 100.0 35 ................................. AGAATGGGCTTTCGCGAAACATTGGGCCGTTTAAC 54215 33 100.0 33 ................................. GACGAACGTGTAAGCGAACACGGAGTAAATACC 54281 33 100.0 35 ................................. TTATACCAGCTAGTGGTGTCAATGCCCCGCACCAG 54349 33 84.8 0 .........................C..TTCC. | ========== ====== ====== ====== ================================= ==================================== ================== 15 33 99.0 35 GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT # Left flank : TGCTGATACTGATTACATATGATGTGAATACGGAAACCGCTGCAGGCAGGACCAGGCTGAGAAAGGTTGCAAAGCAATGCGTTAATTACGGCACCCGCGTCCAGAATTCTGTATTTGAATGTATTTTGGATAATACCCAGATGATAAAGCTAAAAGCCATACTGACAGATATCATTGATGAGCAGACTGACAGCCTTAGATTTTACAACCTGGGAAATAAACACACTACAAAGGTGGACCATGTTGGGGTGAGTAAAGGGATTAAAGTGGAAGAGCCGCTGATATTCTGACCTGGCTGCGGGCGGTAAGGAGGTTTCAAATAGTTTGGTGCGAACCAGAAGCAAACATGAATTTACGGGGGGATTCGCACCGGAAAAACTGCACAGTGAGAACGGTTTTGGATGTGTGCAGGGCAGGTTGGCGGTGATTTGAGGGAGTATGATGTGATTTGATTGTGGAAATGTGATGAAGAATTGTTTGTTTTTTTGTGTAGTATTGCT # Right flank : TTTCTGGTCAGTCTCTGCCCTCACAGCGAAGCAAGCTGAGAATCCGCCAAATTCAGGATTACGTTTAGTCAAAACATCATTCCCCTTTTTCTAAGAAAACAGTATAGTTTGAATCATAAACATTAGCTATAACTAACAACACGCAACAAGAAAGGTGGGCGAACACCCACCTTTGCCATAAAACTGTTATAGGGTATAAAGAACGCGGGCCTCCCTCACCCTTTCCATGCCCGAATCTCTCTAAGCCCCGGCACCAGAACCTTGGCGCTGGTTTCCAGAATAATCCGTCCTTTTTCAGCCGTGGCGCCTGACGGGTCTCCGCCGATTCCTATGGGTTTGCCGTCTGCTGTTTTCCAGTCCTCGGACACCCAGCCAATGGATACGTTTCCATAAGGCCTCAGTGCCTGATTGTCTTTAAATGCAGTTGGAATTCCTGCCTCTGAGGTATCTAACTTTACCAGGGACGGGTCCACGGCCATGACCATGGAGGTTTCCATCTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.90,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //