Array 1 24281-22035 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANKV01000008.1 Lacticaseibacillus paracasei subsp. tolerans Lpl7 contig00008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 24280 36 100.0 30 .................................... GCAGTGTGACATCAGGAACTTCGCTACTAT 24214 36 100.0 30 .................................... CATCAGTCGGATATATGTTTGCACGTCTAT 24148 36 100.0 30 .................................... GTTGTTTACCTTTCATGCTGATACCTGTGT 24082 36 100.0 30 .................................... TCGATGCGATACTGATGGTTGCGCCTTGGA 24016 36 100.0 30 .................................... AATTCAAAATGGTGGAAGGAAACGACTTAG 23950 36 100.0 30 .................................... AGAATAGACTTCGAGGTATGCAGATCAATG 23884 36 100.0 30 .................................... TTACAAAATTGTTGAACTGCGCCAAGTTCT 23818 36 100.0 30 .................................... AGCGCCATGTACAATGAACTTGTAAGATAA 23752 36 100.0 30 .................................... TTTTCAGATTCCTGAGCCGATCGCAAATCG 23686 36 100.0 30 .................................... AGCTAAACCCCGGAAGTCCCGATGTGGCTG 23620 36 100.0 30 .................................... CTTCTTTTGCGCATACTCGGCACCGTCATG 23554 36 97.2 30 ................................A... AAACGGCGACTTTATTAACGTTGATCACAT 23488 36 100.0 30 .................................... GGAGGCCGGTCAGTGGATCAGTCACGACTT 23422 36 100.0 29 .................................... AACGGCAAAGCGTGAGGCTGAGCAAGCTA 23357 36 100.0 28 .................................... TGCATTTTACTTTTCACGTTGCACTAGG 23293 36 100.0 30 .................................... GGTGGCGCTGGAAACTGGATAAACCATTAT 23227 36 100.0 30 .................................... AAAGACTTGCAAGGCGTTCAGCGCTTGCTG 23161 36 100.0 30 .................................... GATTCTCTTCGCCAGTTCTGTGTAGCTTTC 23095 36 100.0 30 .................................... TCAATCTAAAGACATAAATGTTATCATCAA 23029 36 100.0 30 .................................... AGAACAAGTACCGATCGAAAAGGGTATTGG 22963 36 100.0 30 .................................... ACGCGGCCCGCTATCTGGTTTACAACTTCG 22897 36 100.0 30 .................................... CCACTATTTCTAAGCATTGTTCCTAGTTGG 22831 36 100.0 30 .................................... ACGATGACAACCTTGAACTGTATTACTCAG 22765 36 100.0 30 .................................... GTCAGGATGATCTCGTAGTGATGCCGGTGG 22699 36 100.0 30 .................................... GAACGAAAGACAGGTGATCAGGATGGCGGT 22633 36 100.0 30 .................................... CCAAAATATCTGGAATATTGCGTGCCACTT 22567 36 100.0 30 .................................... TTGTTTCCGGTGTTCCGATTGAGTATTTGA 22501 36 100.0 30 .................................... AATCGCATGAGAGCGTCATTGCGGATTGTG 22435 36 100.0 30 .................................... GCTGTGTTGTCATACGTGTAACCAGTGCCA 22369 36 100.0 30 .................................... AAAATCAACTCAGAAACAGGCACATCATCA 22303 36 100.0 30 .................................... CTGCTGCCATTAATGGCGGGTAATATTTGC 22237 36 100.0 30 .................................... TTCAACATCATGGGCGTTGCACGTACAACC 22171 36 97.2 0 ...................C................ - Deletion [22136] 22135 35 75.0 30 -CAAA.....AT....A.G................. AGGAAATTCGAGTTCTTCCCGCAATTGATG 22070 36 86.1 0 C............................G..TTC. | ========== ====== ====== ====== ==================================== ============================== ================== 35 36 98.7 29 GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Left flank : AGCTTGATCTAGATAAACTTTTTCAACGTCTAATCTATAAGAGGATGGAGTTGCTGATTGAGAATCAGCGGCTTGTCGAACTGATCGATCAATCGCAACAAATGGCAATGGATTTACTCCAAGATCCATTCTTGAGCGACTTGCCAGTCACGGTTGAACCAGGCGGTAAGCTCGAACAAATCATGAAATACTGCAACGTTCATTTCGACGAGGCTGTCACGACAGAGTCAACCTCGAAGATTGAGGCGCTTATTCAGACGTTAACTAAACTAGGGGAAAAGAAACTTGTCATTCTTACAAATGTCAGTCATTATTTAAGTGACTGAGATTTCTCTGCGGTGACTGAACAGATCGGCGATACAGAACTTCAGGTTGTTCTCATTGAGTTCTCAAAAGTGAACCGAAGGAAATACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTCGTTGATAGTCGCGAACTAGATTGATTAGGAGATTGTGTGAAAACACCG # Right flank : AAACAGCAGTGAGACTAAACTGAAGCTAAACTTGTCAAAAAGTGCCTCATTTTGTGACAAAATAAGGTGTTTCACTATTTATTGTGTGAACCAAGCCTCAATATTTACAAAGCTGAACCTTTCAACGTTCAGCTTAAAAGCCGCTGTCTAAAGCAATATCGTAGTAACCACACACTCTCAAGCGGTGATATATCAATCAAAAACTAAGTGCTATCCACCTCCTCTTGTGATAGAATTCATTATATATGAAATCGCTTACACAACGAGGAGGAAGAACGACATGAAAAAACTAATAGTGCTCAGTGCCACACTTTTGGTCAGCATGGGGTTGGCCGCATGTAGTAGTGGATCGAGCTCTAGTTCGAGCAAGAGCAGTAGTACGACCAGTCAGACGAGTAACGCTAAGGTGAAGATCAATACCGGCGCCGATGCGAGTGCCAAGGTGCCGGCTGCCGGCACCTTAGTGATGCGTCAGCTTTATGCTGCACCGCACGGCAAGC # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //