Array 1 1817-325 **** Predicted by CRISPRDetect 2.4 *** >NZ_LRCY01000126.1 Klebsiella aerogenes strain GN05782 GCID_ENTE_00255_NODE_37.ctg_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1816 28 100.0 33 ............................ TTGAGGTAATGGCGCAGTCTTCACAGCAAACAC 1755 28 100.0 33 ............................ TAGTTTGCTCTGGCAGCATCGATTAAAAATTTT 1694 28 100.0 33 ............................ CTTATCAACCTCTATCGCTGAGGGGTCAGGCGC 1633 28 100.0 33 ............................ TATTGTCCCAACCAGCGCCCTCTTTCGGGTACA 1572 28 100.0 33 ............................ CGTAGCCAGGCTTGCTCGTACACCTCAAGACGA 1511 28 100.0 33 ............................ TTGTAGAAATTAAGACCTGCTATATCCTGTAGC 1450 28 100.0 33 ............................ TCAACATTGCTGAAAAAGCTGAACGACGGAAAT 1389 28 100.0 33 ............................ TTCCGGGTTGGTGATGATGATCATATCGGTACC 1328 28 100.0 33 ............................ CCGGGGAATCTACTGCCTGAAGGGTTGAGCCAA 1267 28 100.0 33 ............................ TAAATTTTATCGTCGCGGTCTTTGTGGTCGGGG 1206 28 100.0 33 ............................ CACACACCAGGAGAAATAAGTGTCGACTATTGG 1145 28 100.0 33 ............................ CACCGATTGATGCCGCGCCGTAAGCACGATTGA 1084 28 100.0 33 ............................ TTTATCGACTGGTCGAAAGATGCGCTGCTCACT 1023 28 100.0 33 ............................ CGACAGCCACAAGTGAATGAGGTTAATAGTGGC 962 28 100.0 33 ............................ CGGTGAACGCGTTGCACTGCGTAGCGGTGGCGT 901 28 100.0 33 ............................ TCCGCTTTAACAGCCAGCGACGCCAGCGCGTAT 840 28 100.0 33 ............................ TCCTCAAGTGGTACGAGGACGGCGACAATAGCG 779 28 100.0 33 ............................ TAATTACCGCGCCTTGCGGGACGTAGGTCTCGG 718 28 100.0 33 ............................ TGAGCACGGGCTGACCATCAGTTTTGCTCGCAA 657 28 100.0 33 ............................ CAATTCACTGCGCTTGATGGCAAGGTGGATGAA 596 28 100.0 33 ............................ CGGGATTATCTCACCCTCAGAGAGCGAATCGCC 535 28 96.4 33 ................A........... TGGACGGCGACGTTGATCCAACCTGGTACCCTG 474 28 96.4 33 ...........A................ TACGGCACCGAATCGCAGCTGCTGGCTCAGGTT 413 28 96.4 33 ...................A........ CGATGAATGGCCAATGATGACGGCATCCCAGTC 352 28 96.4 0 ..............G............. | ========== ====== ====== ====== ============================ ================================= ================== 25 28 99.4 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TTTACAAAGAGCGGCTCTGTATCGATCTGGCGTTTTCGCTGTCGAGGGAGATGGCGGGGCGATACGATAAACATAAAGTTTCTGAGGCATTCAGAAAACGAGTGATAGCCCTGGATTTGCTCAACCTGATTGCGGCCGATATTAATGAGCTAATGGGAGGAAAACGTGCTCGTCGTACTGGCAAATGATTTGCCGCCAGCGGTTCGAGGGCGAATGAAACTGTGGTTTGTCGAACCCCGGCCGAACGTTTTCGTCTCAGGCGTCAAAGATTCGGTTGCGCAAACCGTCGTTGATTACCTGATGCAGTACACGCCCGCGGAATCAGGCCTGATGCTGTTTCGCAGTATTCCTCAACCGCCTGGCTATGAAATTCGCTACAAGGGCGAGGTCAGGAAGCCGATTATTGAGGTCAGTGGGTTACAGCTTATTATTGAGACCCTAAAACTGTCGTAATACATGGATATAGTGTTTTAATTGTCGCTCTTTCACAATATATTGGT # Right flank : CCAACTTCGACTGCGTTATCGCCCGTAGTGTGGAAGCTTGCTCCCAGCAGGCAAGGCGTTTTATGGGTTTTAGCCGTCTGCCAGATGACACACCGCTTCGATATTGTGTCCATCTGGCGCAATGACAAAGGCGGCGTAGTAATTGGCGTGGTAATTAGGCCGCAGTCCCGGCGCGCCGTTATCCTTGCCTCCGGCGGCCAGCGCCGCGTGCCAGAAGGCATCAACCTGCTCGCGGCTGTCGGCGCAAAAGGCGATATGCAGCGGCGCGGAGCTAGCCGGGGCGAACGATGCCTCTTTATGCCTCTATCAAAGCGAAGATAAACCC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1102-2964 **** Predicted by CRISPRDetect 2.4 *** >NZ_LRCY01000111.1 Klebsiella aerogenes strain GN05782 GCID_ENTE_00255_NODE_23.ctg_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1102 29 100.0 32 ............................. GCAACTTCTCTTTATCGACTCCGTCAGCTTAC 1163 29 100.0 32 ............................. CCGCGTGGCCGCGATGGGGTGAATAACCAGAA 1224 29 100.0 32 ............................. TAATGACCTGCTGACTGCAATTGCGCTGGGCA 1285 29 100.0 32 ............................. TTGAGGCCTCACCGGGTGAAATTCAGGTATTG 1346 29 100.0 32 ............................. TGAATACTGGCGAACTGGTGCTGGTCGATACG 1407 29 100.0 32 ............................. CGCCGGGCTGATTTGCCCGGAAAGAACGGCGG 1468 29 100.0 32 ............................. TAACGGTAAATACGGCCCTGAATCCAGTGTGG 1529 29 100.0 32 ............................. TTCATTAAGCGTGTCAGCAATGACTATCTAAT 1590 29 100.0 32 ............................. GCTGTGCTGCAGGTTATTTTGTATATGTTACA 1651 29 100.0 32 ............................. TGTCGATAGCCATCAAAAGTGGTATAACCTTG 1712 29 100.0 32 ............................. GGGTATGCCCGCGCCACGGTGAGATTGTTATG 1773 29 100.0 32 ............................. CAGGTCCGTTTAAAAATCTCGACACGCGGCGC 1834 29 100.0 33 ............................. CCAATAGCGCATTATTACCAGAATATCGCAAAC 1896 29 100.0 32 ............................. GCGGAGTGGCTGGAAACGGTTGTCCGGCCTGA 1957 29 100.0 32 ............................. GCCTATATGAGTGACCGCGACGGGTCTGTTCG 2018 29 100.0 32 ............................. GTTACGTAGGCGCGCTGCTCAATCAGCCTGAT 2079 29 100.0 32 ............................. GGCTTAAGAGGAAAGAGATAACGTCATATACT 2140 29 96.6 32 ............................A TACAGACGCGGCAACCAATGCGCTGACCTGGC 2201 29 100.0 32 ............................. GTGTGGTAATTATTGAGACGTGCTACGCCAAA 2262 29 100.0 32 ............................. AGTGATTCTCGTGCACTATCAAAGCGTCTGGA 2323 29 100.0 33 ............................. TTATTCAGGAATTCTATTGTGTCTTTTGCTTGC 2385 29 100.0 32 ............................. AGACAGCCAATAAATGGCTGCCGCAGCTGATG 2446 29 100.0 33 ............................. TTCGGCAACGAGCGCAACGACTATCTGATCAGC 2508 29 100.0 32 ............................. ATATGCAGGATATTAAAAATTTCAAACCGGCA 2569 29 96.6 33 ............................T GCGGTGGATAAAGCGCAGGTCGTCATGGGGGTC 2631 29 100.0 32 ............................. GCAGGAAAATCTACAGCCTTCCTACATAGGAC 2692 29 100.0 32 ............................. ACGCGCTACAACGTCCAGCACATCGCGATTGA 2753 29 100.0 32 ............................. CTCATTCAGTATCTCGGTCATTTTGTCGGCGG 2814 29 100.0 32 ............................. GGTAGGTAAAAACATGCCTCATAAATTATCGA 2875 29 100.0 32 ............................. TATTTCCCCTCGGTTGAGAAAGAAGTTAAGGA 2936 29 93.1 0 ............T.........C...... | ========== ====== ====== ====== ============================= ================================= ================== 31 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGTTGTCGGCAGGCGAAATCGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCAGCGATACCTGAGCCTGAATCAATGGGGGATAGCGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTCCCTCCTCGTCTGCGGGGGCGGCTTGCCATCTGGCTGCTGGAGGTTCGGGCGGGAGTCTACGTTGGCGATACCTCAAAGCGGATCCGGGAAATGATTTGGCAGCAGGTGATACAGCTTAGCGATTGCGGAAATGTGGTGATGGCCTGGGCAACGAACAGCGAATCTGGTTTTGAGTTTCAAACCTGGGGAGAGAACCGCCGCATGCCGGTAGATTTGGATGGCTTACGACTGGTGTCATTTCTTCCCATTGAAAATCAATGAGTTGAATGTTCTTTAATAATAATGAAATTGTTGGAATAAAGTTGGTAGATTGTTGGTGCCTTAAAAAGGCATTAAAAAACAGTAATATATGTTTAGA # Right flank : GTAGATTTGTTTTAGGTGACGATTGCCACTTCTCATTCCCATTTCATTCTCGACTCTTTAGCTTTCCCCACTAACCTTTCGCTCAGAAAAATCCGGAGATGGGCACTGTCGGCCAAATTTCTCAGCCCAGGGGAATGGCGCCCCGTTTTTCACGTAAAGCTGGTACAGCCGCTTAACCGATTGTTGGTCGCTCGAGACCCAATTGCTGGCATTGCAAAGTATAGCGGCATAAGCCTGAGATTTTCGCGGTAGCAAACTGGCTGCTTTTTCAGCAAGTTTTGCCGCCCTCCAGCGATAATGCTCAACATTGTTGAATGGTTTGGGTCGTGAATGCTGTATGCGATATTGCTCCTCGCTACCAACCCAGGAGTGTACTCCAGAGATATTGTTTGTGGCGTCTGCGCAGGACAGGTACGTATTTGCGTCACTTAAATACTTTTGGTCAGGCTCCAAAAAATAGCTCATCAGGTTGTTGCCATGCTCGCGTAGAATGACCGCAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //