Array 1 70004-68583 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADKPZ010000002.1 Arcobacter vandammei strain R-73987 IQC44_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 70003 36 100.0 30 .................................... GAACCTAGTCAAATATTCACAAAACAAGAA 69937 36 100.0 30 .................................... TATCCTTTCAGCTCTACTAATCAAATTCCA 69871 36 100.0 30 .................................... ATAATAGTTCACAACATGTGAATTCTTTAG 69805 36 100.0 30 .................................... CGAGTCAAAGAGATATAGTTTGTATCTGAT 69739 36 100.0 30 .................................... TCATGGGTTATCCATAATGATAAATTTGAT 69673 36 100.0 30 .................................... TGATATTTCTTTTATATCTTCAAGTTTCAT 69607 36 100.0 31 .................................... ACAAAGCTACAAACAGCTAGATTAATAAACG 69540 36 100.0 30 .................................... ATGAAATAAGTTTAATAAGTACATCACCGT 69474 36 100.0 30 .................................... ATAATAAAGAATTTATAGCAGTCCCTGCAA 69408 36 100.0 29 .................................... AACACCTACAAAACATACAAAAGGAGCCT 69343 36 100.0 31 .................................... GCTGTAATACTTTTCCAAGCTAAACCTGAAT 69276 36 100.0 30 .................................... TATATGACATAAGAGTACTTAAGTACAAAT 69210 36 100.0 30 .................................... CTTTTGCATTATGATTAATTGCTAATAGCA 69144 36 100.0 29 .................................... AATACGGGCTTCATCTTGAAAGATATAAA 69079 36 100.0 30 .................................... TATGTTTGTCCAGCTCCTACATTTACAGTT 69013 36 100.0 29 .................................... GCACTCATTGCTAAAATATCAGACACTAG 68948 36 100.0 31 .................................... ACACATCCTCTGCAAGTCTAGTTTCTAGCCA 68881 36 100.0 29 .................................... ATGAGGGATTTTCAGGAATAAACAGACCT 68816 36 100.0 30 .................................... TAAACCCGCTACCATCTTGCTCTACGCCAA 68750 36 100.0 30 .................................... AATTAAACTAATAATTGTAAAATACAAACC 68684 36 100.0 30 .................................... AACATTACAAAACTGGTGGAATTGAAACAA 68618 36 80.6 0 .......................TTA.A.A....TT | ========== ====== ====== ====== ==================================== =============================== ================== 22 36 99.1 30 ATTATATCAAATGGGGATTTGAGAGTAGATTAAAAC # Left flank : ATATGATAATCAAAGAGTGCAAGTATCATACTGTATGAAGCAAATAGTTGCTAACTACCAATCTATTTGCTTGAGCAAAACTGACGAATTAAAACTTTTTAGTTTATGAAAAAAATAGAAATAAGTAGATATAGAAAAATGGTACTCTTTGCAATGTTTGATATGCCAACAGATACAAAAGGTGATATTAAAAAATATACAAAGTTTAGAAAAAAACTTTTAGAAATGGGTTTTATTATGTTTCAGTTCTCTATTTATGTGAGATTTTGTAACAGTTTAGAAACAGCACAAAAATATGAGAGAAAAATTAAAGAAATTGCACCTACAAAAGGCTCGATTAGGGTGTTAAAAGTAACAGAAGCTCAATATAAAAATATGATTATTATAGAAAATTATCGTGAAAAACCTGAAAAAAAGGTAGAAAAACAGACTCAAACAGTACTTATTTTTTAGTATAAAAACTTTATAAAACCCTGTAATACAGGGTTTTTGGCTGGAAT # Right flank : TTTATTTATCTCTTAATATCAAAATTGTAGCAAAAGTTGAAATAACAATTCCCACCATTACTCCAAAAGATATGCTCTGTTTTTCAAAAATATACATAATAACTGCAACCAATGCAGGGCTTAAATATATATAAGCCATAATCTTTTTTGGTCCAAGAATAAGCGATGCTTTTTGGTATAAAAATAGTGTTAAAACTGTTGTTCCAATCGTAAGATATAGCATTGAATATAGTAAATTTCCTTCTATTTTACTCCACTCATAAGGGATATTTAGCACAAACATTGTAAGACTCATCCAAATAATTCCACCTAGAAGTGTGCTTGTAACTGTAATAACTAATTCATCTTTTTTTGTATATAAAATCTTCAAAAATATTGGATAAAGTGCCATAGAAAGTGATGCAATTAAAAATATAATATCGCCTTTGTTTAGTGAAAATTTTAAAAATAGTTCAATATTAGCTTGAAAAATAATTATACAAGTTGAAACAATTCCCACA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATATCAAATGGGGATTTGAGAGTAGATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.20,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //