Array 1 20326-20502 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRSK01000027.1 Ectothiorhodospira mobilis strain DSM 237 scaffold0027, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================== ================== 20326 37 100.0 34 ..................................... AACAGCAGCTCCCCCCGGTAAAACACGTCGTGGG 20397 37 100.0 32 ..................................... GCCATGCGCGGTGCGATATGTGATGGCCATGA 20466 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================== ================== 3 37 100.0 34 GACCGAAAGCCTTCCCTGAAGAAGAAGGGATTAAGAC # Left flank : TGTCGGGATGTCGGTGACGGCGCAGAAGGAGTGGATCATCTGCTACGACATCCGCGACCCCAAGCGCCTGACCCGGGTTCACCGCTTCCTCAAGGGACATGGCCAGCCGGTGCAATACTCGGTCTTCTACTACGAGGGCCATTCCGGCCAGCTGGGTCGGCTCCTGCAGGACCTGGAAGAACTCATCGACCCAAGGCGCGACGATGTCCGGGCCTATCCCATCCCCCGGCCCATGGAGGTCCATACCCTGGGCCGGGGCAGCCTTCCGGACGATGTGGAACTACACTCCGATAAGGCCCCCGGCCTGGCCCTTTTCCTGCAAGGACAGCGCAAGAAATGAAGACCAAAACAGCACATCCCACCGGCAGCAGGATACCCCGTATCCCCCGTCCATCCGGATGGAATGGCCCACTCAAACCGAAGTTCCCTCAGCAGAAGCCGGAATTCTCCGGAAACCCAGTTGCAAGTCATTATTTCTGCAGCATTATCCGCATCGAGCG # Right flank : CACAGCGAAAGGAGCCCAAAACCGTGACCCGACTCCACATCCAGCTGGTGTCCAACCAACTGGCTGGCAATCTCATCCCCGCGCTTATGGAGCGACCCGAATACGCGGCCCTGATCGTCACACCGGATATGGCCGCGAAGGCTCGCCAGCTGCGCGAGCTGGAGGAGGAGGCCGGTATCGTAGTGCGGACCTTTGAGAATGCCCCGGATGCCGACCTGCCGCGTCTGCACGAATTTGCACTGGATGTCCTCGATGGGCTGCCGGCGGTGGACGAGTTGGTCCTTAACCTCACCGGCGGTAACAAGCTCATGGCCCTGGGCTTTCTGGAGATACTTCGGGATACGGTGCATCGCCGCATCTATACCGACACGGCCCACGGTCGGCTGGAGCACCTGCCGGTGGGGTCGGAGCGGGCCGATCCGCCCACCCCCCTGGGGCATGTGCTGGATGTGCCCATCAGTCTGCGCGCCCAGGGCTTTCGCTATCGCAGCGCGGTCTCT # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GACCGAAAGCCTTCCCTGAAGAAGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.40,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 43091-40134 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRSK01000005.1 Ectothiorhodospira mobilis strain DSM 237 scaffold0005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 43090 29 100.0 32 ............................. TCGTCGTCGCTGTCGCGCGTCTCGCTCCACTC 43029 29 100.0 32 ............................. TGTCTACGTCGAGCGCGCCGCCCAGGTGCCGG 42968 29 100.0 32 ............................. CCAGGGCGAGCAGGTCCACCGCGCCCGGCTAC 42907 29 100.0 32 ............................. TGCGCGAGGCGCTGGGCGAGTACCAACTGCCG 42846 29 100.0 32 ............................. GCTGGACGGCCATATACCCCAGCGCCGCCGTC 42785 29 100.0 32 ............................. TGTGAGCGCCATGACGCGCATGCAGATGATCG 42724 29 100.0 32 ............................. CTGCCTGACCGCGACGAAGCGCGCATCCTATA 42663 29 100.0 32 ............................. CCCCATTTCGGAATCGCTTATTCGCCATTTCG 42602 29 100.0 32 ............................. TCCCACCCAGCCGTTACCATCCTGCTCCAGGT 42541 29 96.6 32 ............................C TGAGAGTCAGCGGCCACGTCTTCCAGGACGGC 42480 29 100.0 32 ............................. CCGATAGAGCTGCTGCAGGTTCCCGTCTTCGT 42419 29 100.0 32 ............................. GTGTGGCGGATGGTCACGGGCTGGGTGACGCC 42358 29 100.0 32 ............................. CCCGCACTTGACGCGCCCGACTTTTCAGAGCC 42297 29 100.0 32 ............................. CCCTAATCCACGGGTCCACGGGTTAATCTGCC 42236 29 100.0 32 ............................. TGATCGGGTCCAGCCCCGGGTCTTCCGGTTCC 42175 29 100.0 32 ............................. GCTTGCGCGTCGTAGGGGTCGACGCTCTCAAG 42114 29 100.0 32 ............................. AACCGGTACCCGTCCCCCTTCTTCATGCGGGC 42053 29 100.0 32 ............................. TTCTGGTGAGGGTGCCCCGGGCTGCACCCGGG 41992 29 100.0 32 ............................. TGCAGTTTACAACTAGGTGCGCCTGGGCTTCG 41931 29 100.0 32 ............................. TACCCGCAGTGTGAGGGATGCGAGTACCGGGA 41870 29 96.6 32 ............................C CCTGCTGGAAAACCGCGGCGAGCGCCCCATCC 41809 29 100.0 32 ............................. TCGATGCCCGCAAACTCGCAGATCAGCTTCCA 41748 29 100.0 32 ............................. CGTCGTCGGGCAGTCCACGGGCCGATGGGTTC 41687 29 100.0 32 ............................. CACATCAATTTGGTCACGCAGGCCACCGGCGG 41626 29 100.0 32 ............................. GCCACTGGGGTCCAGGCCGGCTACTACAACAA 41565 29 100.0 32 ............................. CTGCAGATCCGTGCCCCCCGAGACCGGGACCG 41504 29 100.0 32 ............................. ATCACCGACGCGCAGATCACGGGCCACCTCAC 41443 29 100.0 32 ............................. AGCGCCTGGATCTGGAGGATATCGGCCCCGGC 41382 29 100.0 32 ............................. TGGCCATTGCGATACAGCCATCGGTAGAAGCC 41321 29 100.0 32 ............................. CCGACAGCCACGCATGCGCCACCTGGGCAGTG 41260 29 100.0 32 ............................. GCCACGCCCAAAGAGCGCGAGTTGCTGAAACA 41199 29 100.0 32 ............................. GCCGCCACCGGCAGCGCCTCCGAGGGGATTGA 41138 29 100.0 32 ............................. GCACTGAAAGCCAGCCTGCTACGCATGTCGAA 41077 29 100.0 32 ............................. TTCCTGCAGCTCAAGGCAACGACTCGCACGCC 41016 29 100.0 32 ............................. GATCGGATCCCGCATCTCCGTGGTACGAGTTC 40955 29 100.0 32 ............................. ACGCCAGCAGGAAATTCGTACCGCCTTGGGAC 40894 29 100.0 32 ............................. CAGGCCCGCGGCATCCTGATCCCCGACGACGT 40833 29 100.0 32 ............................. CAGCAACGGGCGCTTAATCGTCGCCTTTGCAG 40772 29 96.6 32 ............................C CCATCCTGCTGGGGGCGGACCGTCCGGTGCAC 40711 29 100.0 32 ............................. AACAGCTACCTCGGCATCTGCCAGCACGCCAA 40650 29 100.0 32 ............................. CCGACGGCTATTGCGACATCACCCTCGACCGA 40589 29 100.0 32 ............................. GCGGCAGCTTCGCCACGCCGCTGTACGAGGGC 40528 29 100.0 32 ............................. GCCGCGACGGCTTGGGCGTGGCTCAAGGGATT 40467 29 100.0 32 ............................. ACACCGCGCAGCTGTTCAGCGCGGTGCGCGAC 40406 29 100.0 32 ............................. CCGGTCTTTTCCGCCAGCTTCGTGGCGCCCCC 40345 29 100.0 32 ............................. CCGTGATAATAGATTGGACGATCGGTCACGCT 40284 29 100.0 32 ............................. GGGCATGGGTTGATTCAGGTGGTATCCCGTCC 40223 29 100.0 32 ............................. GACGATCACGTCATCGACTCGGTACGGGAGAT 40162 29 96.6 0 ...........................T. | ========== ====== ====== ====== ============================= ================================ ================== 49 29 99.7 32 CCGTTCCCCGCGCCCGCGGGGCTGAACCG # Left flank : AGCCCCCGCCCCCTGCGCCAGAGGCGCAACCACCGGCCATCCCCGAGGCGCAATCCATAGGCGACGTGGGACACAGGAGTCAGTAAATGGCCATGCTGGTCGTCGTCACCGAGGCCGTCCCGCCCCGCCTACGGGGAAGGCTGGCCATCTGGCTTCTGGAAATCCGGGCCGGTGTCTATATCGGGGATGTATCGCGTCGGGTCCGGGAACTGATCTGGGAACAGGTCAACGCCCTGGTCGATGATGGGAACGTGGTTATGGCCTGGGCGAGTCAACACGAATCCGGCTTCGAGTTCCAGACATGCGGGAAAAATCGCCGCATACCAGTGGATTACGAGGGACTGCAGCTGGTGCGGTTCGCCCCGTCTCCGGAAGAGGAAACGTAAGTTGTTGATCTGAAGGTGTTCTTTAACAAAATGAAAATTCGTCTTGGGGGTATTCTCGCTGGTGGCTCATGGCTTTCCCTGTAAAGCCTTTTCATTCAGTATATTAGATGAAGT # Right flank : GTCGGGGGCGATCGCCGCGCCTATGTCGAGCGTATCCTGGGCGCGCCGCAGAAGGTGGTCGATCTGCCGGATGGTACAAAGCTGGCGGTCACCGCAAAGGCTCTGGCCGATCATGTCCCGGCGGACCGGCTGCCTTACCTCAGCCACCTCGACGATGTTCTGACGGACCCGAGCGAGATCTGGCTCAGCTTCGAACGCCACCAAGGCACGGGGCAAGGTCCACCTGCGTAAACGATTGGCCAAGGGATTGCCGATGGATAAGGACCGCTTCGTCGTGCTGAGCGCTCAGGCGGTGGAAGGGCGCTTCGAGGCCTGGACGGTGGTGCTGACCAGCAAGGCCAGCTACGCACAGGGGCAGCGCGTCGGGCGCTTGATCTATGGCTGGGAAGTAATGATGGATAGGGGACTCGCCGGCAGCGGCGCCGGCAGTCGACTGGCAAAGGCTTCCGGGGCCGCTCCCAGCCTCCAACTAGTCGATGCCTATGGTAGGCACCGTATGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCGCCCGCGGGGCTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCGTTCCCCGCGCCCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 4279-271 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRSK01000030.1 Ectothiorhodospira mobilis strain DSM 237 scaffold0030, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================================= ================== 4278 37 100.0 38 ..................................... CTGGACTGGACGGACGATTCGGTTTATTGATTATATAT 4203 37 100.0 37 ..................................... GAGTAATGAGGATACGAGGAATAGTCAGTCCAAACAC 4129 37 100.0 38 ..................................... GACCTGCTGCACGCCATCCCCAACGGCGGCCACCGGCA 4054 37 100.0 37 ..................................... GATATGGCTTGTTTTGTCTCACGGTCTCACACCTGCC 3980 37 100.0 57 ..................................... TATCGCCGCCAGCAATCCCGCATTGCTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTT 3886 37 100.0 40 ..................................... GGCCGCCGATGCCGACGCGAAACCCTCGGAGTATCTGCGG 3809 37 100.0 38 ..................................... ATCTCGGCCATGCGCTGGGATTGCCCCGATCCATAGAA 3734 37 100.0 36 ..................................... ATGGCGACGGGCGGCGGCCCAATGGCCGACTTTTTT 3661 37 100.0 38 ..................................... GTGACGAACTGCACCGGGTCGCTGGGCAGCAGGCGCTT 3586 37 100.0 38 ..................................... CAGCATGCAGTCTGTTGTTTGGGCGTCTGGAACGTCTG 3511 37 100.0 36 ..................................... CAGCCGTAGCGAGGAGGAGGGGACCTTATTTGTTTT 3438 37 100.0 36 ..................................... GCCTTTCACACATCTCTGTGGTAGCACAAAAGATCA 3365 37 100.0 36 ..................................... GCTGTATGGAAAAAAGCAGTAGAGGAAGCACCATCC 3292 37 100.0 37 ..................................... TGGACGAGACCGCCTGGGAGCACAAGACCCTCAACAA 3218 37 100.0 36 ..................................... GAGCAGATGATCTCCAAGGGCCGCGTCAGCGCGGAG 3145 37 100.0 38 ..................................... GCTAACGTCAGCCGTGGCAGCGGATTCCGTGGCGCGCT 3070 37 100.0 37 ..................................... TGCGCCGGGTGGAGGGGTATGGAAAGGACATGCCCTT 2996 37 100.0 38 ..................................... GGATCAAAATGCACCTTCATCTCCGGCGTTATCTGCCG 2921 37 100.0 38 ..................................... TTCGGCGAGAACGAAAACCGCGACCCGCTGACCGTGTT 2846 37 100.0 38 ..................................... TCGAAGGCCAGGAACAGGTGGTTGGCGTGCCCCATGAC 2771 37 100.0 39 ..................................... CCTGCAGGTGCAGGTGCAGGGTGAGCTTTCCGTCCGCGC 2695 37 100.0 40 ..................................... CCGCGGTCCGTGCGGCAAGCACGCACCAACGGGCGGCAGT 2618 37 100.0 39 ..................................... GCGCCCTGCTCCATGCCTTCCAAAGGTGGCGTGGTGTAA 2542 37 100.0 37 ..................................... GACATGGATTACCCCCTCTGTATGGTCAATCGGAGTC 2468 37 100.0 36 ..................................... CAGCAGGCCGGTGAGGTCGAGCTGTTCTCGATAGCC 2395 37 100.0 36 ..................................... GTGGGGGTCGTGGTGGCTCAGGAGCGCCGCTATCGA 2322 37 100.0 38 ..................................... CCGACGTCTTCGTCGAGGACGAGATCTTCTACCGGGTC 2247 37 100.0 35 ..................................... TGGAGGCCCCCGCCTCAGTGCGGGAGGCCGAGCCC 2175 37 100.0 46 ..................................... ATGCAGGCCAGGATGATGAATCTCAACTACGCCACCCTGCGGGAAA 2092 37 100.0 38 ..................................... CGCCTTGCAGAAGGCCTACACCCAGCGGACCGGCCCCA 2017 37 100.0 38 ..................................... GCGGCACCCAGGCGGCGGGTGGACCCCATCATCAGCAG 1942 37 100.0 39 ..................................... GCCGCCGCCCGGGCCTTCCTCGTGGTCAACACCTCGGCC 1866 37 100.0 41 ..................................... GCTCCAGGATACCAAGACGGGGCGCCCGAGGACGGTCCCGC 1788 37 100.0 36 ..................................... TCGCTGGGAAGCTCCGTCTGGTCGATATACCGCCGC 1715 37 100.0 38 ..................................... CCGGGCGGCAGGGGCCGGGGCGGACCGCATGCGCTCAT 1640 37 100.0 37 ..................................... CCTTGGACCCCTACAGCGTGGTGATCGACCGGGAGGC 1566 37 100.0 38 ..................................... CTGGTTGGGCTCTTGAATGCGGTTGATTCGTCTACGTT 1491 37 100.0 38 ..................................... GAACGTCCTCCGACCTTCCCACTCGCTTACCTGGCTAC 1416 37 100.0 37 ..................................... CCCTCCACACCCTCGCCACCGAAGCCGAGCAGGCCCG 1342 37 100.0 36 ..................................... CAGCCTGTACAGCGACGCGCTCAAGGACGCGGATGG 1269 37 100.0 38 ..................................... TCGATCAGCGGCTGTGCCAGCCCTTTCAGCCCTGGCAA 1194 37 100.0 37 ..................................... GTGAGGGTGTCCGCGCCCTTATAGACGCCGGTGATCC 1120 37 97.3 36 ..........................A.......... GCCGGAGGGGCCGTTGCGGGTGATGGCGTGGCCGGG 1047 37 100.0 36 ..................................... TGGGGCGCACATGGATGTGGACGGGTCCGGTCTGGC 974 37 100.0 37 ..................................... TGCCGGGCGGCGGCGGCCTCGCGCCGCTCTTGTTCCT 900 37 100.0 35 ..................................... TCGGAGATCGGCGTGCGGCATGGGCTGGTGTCGCC 828 37 100.0 37 ..................................... CGGTGGCACCGGCGCCGAGCAGATGATCGAGATGCTG 754 37 100.0 37 ..................................... CAGCAAGATCATCGAACGGTTCGTGCAGCGCGGAACC 680 37 100.0 37 ..................................... CCTCCAGGTGGCCTGGCGCATCGCTCCCGGCGCCCTG 606 37 100.0 35 ..................................... GCCCCGCGCAGCCCGTAGCACATTGCCCTCATGGC 534 37 100.0 37 ..................................... GTTTAAACCCCCAAAAACAAGCACTTAGGGAACACTA 460 37 100.0 40 ..................................... ACGGTTCCAAAACCCTCTCGATCTGTACAACCGAAGCCTG 383 37 100.0 39 ..................................... GTTCGGCGGCGGCTTCTTCACCGCCCGCATGAAGGACGA 307 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================================= ================== 54 37 100.0 38 GCTTCAATGAGGCCCCGGCGGTAAAGGCCGGGGAAAC # Left flank : CTGGACAGGGATCCTACGGCTTCTGATAACAAGCCGCGTACCGTCTGGATGGCCAACCTACTCGCTTATCACGCACTTGCCCTTTTCCCTAGTGTCCCGACTGGTAAGCGGCTTTTGACTGCCGGATGGGGAAGGCAGAACGGTGAGGATGTATTCACTTGGCCCCTCTGGACGTGTCCACTTTCAGTGGATACCGTCCGCTCACTCATATTGCTCACGGAGCTATACGAAGAGCGTCCCGACCGGGAGGTGCTACGGGCGCGCGAGATCGGGGCGGTATTCCGCGCTCGGCGTATCCGTGTAGGAGAAGGTGCAAACTCAAAAATCAATTTTAGTCAGGCTCGGGAGGTATGATGTGGATTTGAAGGTAATTCCGTTCGTGCTCAGCTAATTCGATAAATTTCCACGGTAAGGCGGGTTAGGAAAATCGATGTCAGATTGTGATGTGGTGAAAGCTGTGAAACCTTTAAATCCGCCAAATCCCTCGTAGGGCTGATCGC # Right flank : CGGACTCCATCCAGAGGTGCGGCAGGGTTTACTTTCAGGCATGAATCGCGAGTATGTGCAGATAGGGAGCAGTCTGGAGTGCCTCCGGATCATGCTGTATCACCGAGTTGGGCTTAAGGTTCTGTTTTTTAAAGAAATAATTTTTGCGAGCCTGAATTCAACCAATAACCGCAACGCCCCGTCATGCGGCGCGTTGCCGCTGTAAAGACCCCACCAGGACCTCGATCGGGGCCCGGTACCCGAGCCGCTTGCGAGGCCGAAGGTTGAGCCG # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGAGGCCCCGGCGGTAAAGGCCGGGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.20,-12.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA //