Array 1 84990-81054 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACZDK010000007.1 Bifidobacterium dentium strain 831B Contig_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================================================================================= ================== 84989 36 100.0 36 .................................... CTCGACGAATGCCGGACACAAGCACAAAAAACACGA 84917 36 100.0 39 .................................... AGGAAATACATGCTAGCGGGGTACAACAAATGAGAAAAT 84842 36 100.0 36 .................................... ACCACGATTTTGGCCGACCCGGTGCTGGGACGATAT 84770 36 100.0 36 .................................... TTCGACACGGTGGACGATTTCACTAGTGTCATGCAG 84698 36 100.0 35 .................................... ATGCATGGTCGCCGGACGGCATTCCGTGCCGTCAA 84627 36 100.0 37 .................................... GTCACCAAGCTTGATAGGGAGCTTGCTTCGCGTCCGC 84554 36 100.0 36 .................................... GTTGCTTGATCAGCTTCGTACGTCGAACCAGCGTAT 84482 36 100.0 35 .................................... CGCCATCGAAATCAGCAGCTATGCGATTGAGTGGC 84411 36 100.0 37 .................................... GACGGGCGCATCCGATGATAATCCTTCTTGCCCAATG 84338 36 100.0 38 .................................... GCCGAGGGTAATTACAGGCTTTTTCCGACCACGCAGAA 84264 36 100.0 35 .................................... TTGGGCGATGATGTCTACGGACGCTATTCGCTCCC 84193 36 100.0 35 .................................... TCGCCCTACAGGATGGTACGAAGAAACTCGAACAT 84122 36 100.0 37 .................................... GAGCTTGGTATGATCTGCGAGAGCGACGGCATCGCGG 84049 36 100.0 38 .................................... ACGTATTGGCAGTGCTCCGAATTGTGGCTCGACAGCGG 83975 36 100.0 37 .................................... TTGCAAAACTAATCGCGTTATGCATTGCAGAGGGAAA 83902 36 100.0 35 .................................... TGTCTCCTTTACATGTATGTATCGTGGCTGGAACA 83831 36 100.0 37 .................................... ACCACGAAATCCGGTAAGGTCACGAAGTATCATACCG 83758 36 97.2 36 ........................A........... CCAGACCAGCATCGAGAACAGCGAGCAGTCCCTCGC 83686 36 97.2 38 ................................G... CGTCCAGTCAAGCGTCATACCATCTTGCGAGGTGGGGA 83612 36 100.0 35 .................................... TCCTGGAAGGAACGAGACAATGACAAGACGGAACA 83541 36 100.0 36 .................................... CGTGAAACCCTCGGCCCCCTCTTCGAGCAGTTGCAG 83469 36 100.0 35 .................................... GCGTCTGCGGAAACTCCGAATTGAAGGTCATTGAG 83398 36 100.0 36 .................................... TTGGTCTGGGTCGGCGCCTTGTGCGGAGGCCAATGA 83326 36 100.0 37 .................................... GTTTCACGACGCGTACCGAAGGACCACAACCGGCCAA 83253 36 100.0 39 .................................... CCGTCCTTGTCGAACGTGCCGAAGCCTCCCGGCGCACGT 83178 36 100.0 37 .................................... GCATGGGATCTGGCCACCGTCTCCGACCGGCTCGCCG 83105 36 100.0 35 .................................... ATGATTTAAGGAGATTACATGATTACCGGTTTTTT 83034 36 100.0 36 .................................... GCGGCAAAGGACATCCTGTCGGAGCTCGTCTTCGAA 82962 36 100.0 37 .................................... TGCGCCCAGATGTATCCGTCCGCGACGGTGCCTCCGA 82889 36 100.0 37 .................................... CAAGGCTCAGGCCGACTCGACGTACGCCACACAGACC 82816 36 100.0 35 .................................... TGCAAGGGCAAGTGGGAGACGGCGCATTATGAGTC 82745 36 100.0 36 .................................... ACGAAAAAATATTTGCAATCCAAGAAATTGCAAGAA 82673 36 100.0 36 .................................... TTCGCGGCCACGGTAAGCGCCAATATAGCCTCGGAC 82601 36 100.0 36 .................................... TGTCGACATGCAATGCGGCGAGATCGGTGACGGCCT 82529 36 100.0 38 .................................... GGATTGAGAATATCGCATGAATTACCTAGCAGATACAG 82455 36 100.0 35 .................................... TTGAAGGTCTGCGTCACGTACGTATTGCCGGACCT 82384 36 100.0 37 .................................... GGCTGGACAAGCCTCAACCATGACGCTTCGGGCAATC 82311 36 100.0 37 .................................... TCGCGGAGGATGTCGGTGAGTCCGGGGTTGCCGTCTT 82238 36 100.0 37 .................................... CTGCTATGGCGGCTGGGATTTAGGCGCGGTATCCGAT 82165 36 100.0 36 .................................... CAGTCGGCGCTTCGGCACACACTAACATCGTCTCCT 82093 36 100.0 36 .................................... GACAATGCGTGACATGAAGCTCTACATCTCTGGCAG 82021 36 100.0 37 .................................... AATCAACTCCGCTTCGACACCATCGGCAGACGCGAAA 81948 36 100.0 35 .................................... GGGACGATGGCTCAGGACGTCTTCAAGCCCGAATA 81877 36 100.0 36 .................................... GATTGGGATACCATCGACCCGATATACGGTGAAGCC 81805 36 100.0 35 .................................... GATTGGTACGAGTTCGGCGGACGTTGGGACGACTG 81734 36 100.0 35 .................................... ACGGACCATTTCAAGGGCAAGGTCGTGCTGTGCAA 81663 36 100.0 38 .................................... ACAAATTACGCGGAGTGGAGCAAGCAGAATCGTGTCCA 81589 36 100.0 35 .................................... TGGTTTTCGAAGATGCTTCCGTAGGCGGTGGTGGT 81518 36 100.0 36 .................................... AAGCCCCTAGGATTCCACGAATGGCTCCAAGGCCAA 81446 36 100.0 37 .................................... ACGATCTTTCCGTTTTCCCACGCGGGGATGAGGTTGC 81373 36 97.2 35 .....C.............................. AAGAGGGCGCGCAAGTATGGTCTCGGCGTGACCGG 81302 36 100.0 37 .................................... ACGTTCGGCTGGCCGGCCCTCGCAAGAGAACTCGGCA 81229 36 97.2 103 ........A........................... ACGTATTTCCCGTTCATGGGCACCCTGAACAAGATGTTTCTGAACGGCAATGCTCAGGTTTTCTGGGACCGACCGGCGTGCAGATTGCGTGCGTCGTGGTCAA 81090 36 83.3 0 ...........T.GT........CT.........A. | C [81088] ========== ====== ====== ====== ==================================== ======================================================================================================= ================== 54 36 99.5 38 ATTCCTGAGCAGTAATGCTCAGGACTTCATTGAGGA # Left flank : CGCTTATGATATCAACGATGATCGCCGGCGTAGTCATGTGGCAAAAATACTGCAACGCTGCGGTGAACGATTGCAATACAGTGTGTTTTTGCTAAGAGTGCGTCCGTCAAAGATGCTTCAGATTCAGAATCTGCTTGAGTGTGAAATTGATGGATCCTGTGATTCCGTGGTTGTTTGTTTCCTTGGGAAAGAGGAACAAGCGAAAGATGGGATGAACTTTCTTGGCAGGCGTGGGTATAACGATTTGGATATTCCTACTGTCATTTAGCGGTTTTATCACATATGGAAATGTTGTTTGAAAACTAAAGAGTGTGTCATGCTGATTCTTGATATGCGAGAGCTGAATCGGTGGAAATGTAAAGTGGTAGCGCTCGCACCATATAGGATAACGACTCATATGTGTTTGCATCGTAAATGATGGTTGTTCAAGTGTGTGACTATAGCGAGTTCTCGCAAACCTCTTGATTGAGCTAATCGATAGGCTGAGTTAGAATGAGGCC # Right flank : CGAGGCCACAGTTGATGAGGATGCTTCACATTCGGATTCAGTGGGCTCGTCATGCTGTGCTAGCACTGGATGCATCCCATAAATTGGAGTGCCTCATCCAGTTGCGCGGTTAAATCTCCGTCCAGCTCAGCAAAGAGACAAACCTCGATAAGGCTGCAGGGCGATTAACGCGGCGTACTCTTCGTGGAGTGCATCAATGCGGCAGACAGGCATTTTCATGCCTCGAGGTTGTTCATTTAACCAATTCAGCCAGAATTACACAAACGCAGAGCTCACCCATGCCTCGTCTTGAAACACTCTTCGTCACCATTAATACCTAGAAAAGGAAATGGTCGGGATATGGAACCCGATCCAGACAAATACCATTCCTCAACGAATAGGCTCATACGTGGCGTGGCGTAACCGCGTCCTGCGGGCTGCGCTACACTGGGGTGCGGCTCGTCATCTCGATGAGAGGACGAGCACGGTGATGGCGAGTATGAGCATAGTCGCATGCGTCA # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.10, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCTGAGCAGTAATGCTCAGGACTTCATTGAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.00,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //