Array 1 123679-122369 **** Predicted by CRISPRDetect 2.4 *** >NZ_MOLH01000027.1 Escherichia coli strain 685 BN4_685_1_(paired)_contig_27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 123678 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 123617 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 123556 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 123495 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 123434 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 123373 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 123312 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 123251 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 123190 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 123129 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 123068 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 123007 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 122946 29 100.0 32 ............................. TCGTTGATGGTGTGATGAGTGTACAAAAAAAA 122885 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 122824 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 122763 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 122702 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 122641 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 122580 29 93.1 32 ........C....T............... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 122519 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 122458 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 122397 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.2 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAAC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //