Array 1 1916617-1917981 **** Predicted by CRISPRDetect 2.4 *** >NC_016584.1 Desulfosporosinus orientis DSM 765, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1916617 32 100.0 35 ................................ AGGCTGAAAGAAAAAGAATTCAAGCTATTGAGGAC 1916684 32 100.0 34 ................................ TAATTTAGTCATCTCATCAACGTACACGACGATC 1916750 32 100.0 36 ................................ TAATCTTATCCATGCCCATTTGCTCCATAGCTGATT 1916818 32 100.0 33 ................................ CTTAGGACCTCAGACTCATTTTCCTGAATATTC 1916883 32 100.0 33 ................................ TGCCAACAAATATATCTAGCCAGTAAAGCATTA 1916948 32 100.0 35 ................................ GGATCGCGAAGGGAAATTAATTATCGAGCAGTTAT 1917015 32 100.0 33 ................................ CGCAGTGCATTTACTCAGGCGAATTTGATTAGC 1917080 32 100.0 34 ................................ TGTGATAACATTTGAGCCGCTGGCATGACTCTAG 1917146 32 100.0 36 ................................ TTCCCTTGGAGTAAATCCAACACATTCAAACGCCGG 1917214 32 100.0 35 ................................ TCCGTTAGTCCTCGTAATGTTTGAACTAAGCTCAT 1917281 32 100.0 37 ................................ TTGGAATGATCGGGGGGCGTAGGTAATTGAGTCGAGC 1917350 32 100.0 35 ................................ TGTTTCTTCGTCGATCCCTTGCACACTGAATTGAG 1917417 32 100.0 35 ................................ TTCCATAGTTCGGTCTTCATATTCCGGCCCGTGTG 1917484 32 100.0 35 ................................ TGCACCACTACTGAGGACATTTTCGACCCGCCTCA 1917551 32 100.0 33 ................................ GGATTATATCACGCCGGATACCAATTCCCGCAA 1917616 32 100.0 33 ................................ CCCATCAACCTGACCATTTGCCTCCATGGTTGC 1917681 32 100.0 36 ................................ CCCCATGTTTGCCACTTATTTTCCTCCTTCCTTAGA 1917749 32 100.0 37 ................................ CCTTTCCCCCTTTACTCATCATGTGTCAAAAGGTCGA 1917818 32 100.0 33 ................................ ATTTCTTTCAACTCAGCCAGTATTTAACGTAAG 1917883 32 100.0 35 ................................ TTACCGTATATTTACCATCAAGTAGTACAACTTGT 1917950 32 96.9 0 ...............................A | ========== ====== ====== ====== ================================ ===================================== ================== 21 32 99.9 35 GTCGCTTCCCACTGGGAAGCGTGGATTGAAAT # Left flank : TCTGGACGAAGAGATCTGCTCCCTCCTTGCCAAGCGCAAAGAGCAGTCCAATGAAAATCCCGGTTTTCCCTATCTGGACCTGATTTCCAGTGGAGCCTTTGGTCTTTAGACAGCGGCTGTGGCGATTGTAGAGCAACTTGGAAGAACTTGACTTTACCAAAAGTATTACTTACACTTTAAGTAATATTTTTGGTAAAGAGGTAATTGATGATGCCCAAATTGAGCAATTTGTTCGACTTATCGAGCAAGGAATTGCCCTTATTATGATTTTCTAATATTTAGGTCGGTGGTATATCAGGAAAAGGAGAATGGGGATATACGAACTATTTTAGTGCGAATGTGAAGCGAACATAAAATCCCTGGGGATTCGCACCGCGAAGTATGTGAGAATTTGCTGAAATATGTAGAGAGTATTAGGGAAAGAGCTGGGTTTTTGGTGAGCAAGGTAATAAAATAGGATAAAGCTATCTGAAATAAGATGGTTTTTATTAGTTTTTGCT # Right flank : ATTTGTGTAAAAAGAATGTCTTCCCATAAAAAGTGGTTAAGACGTTCTTTTTATTTATCAAAGTAAAAGAAACGACAAATTCTAACACAAAATATGGCAAAAGGAGAGCTATAATAAAAAGACAAGTATAAGCAAGGGGGAATGCCTACGAACTCCAAGCGTTTTATTGCTCATATCCGCGCAGCCGATAAACAAGAGCAATATGTAGATGAGCACAATGATCATGCAGCAGAGCTGGCTGCTGCTGTGGCTCAGGGTTACGGCCTTGCTAATATCGCCAAACTGGCGGGGCGGCATCATGACGACGGCAAAAATACGCCTGAGTTTACCGCATATATCCGGGCGGCGGCTGAGGGAAAAAAAGTCGTCCGCGGTTCTGTTATTCATTCTACTCACGGCGCCATACTGGTCAATGAACTGGCTTCCTCAAAGCTGAGTTCCCGTTTAACTGCGGAAATGGTCCGGACGGCAATTATGAGCCATCACGGACTGAGAGACTG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTTCCCACTGGGAAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.00,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.74 Confidence: HIGH] # Array family : NA // Array 2 1926565-1928724 **** Predicted by CRISPRDetect 2.4 *** >NC_016584.1 Desulfosporosinus orientis DSM 765, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1926565 32 100.0 35 ................................ TTTTAACCCCAATACGCGCCATTTCGGCGTTTAAA 1926632 32 100.0 36 ................................ GCTTTCCCCCGTTACCTATTGCGTGGAGGAGCTTAA 1926700 32 100.0 35 ................................ TCCATGCAATCGGAAACGGCGGGAAGCGAAATATC 1926767 32 100.0 33 ................................ ACATTATCAGCAATCAGAGAATTCAGTGGATAT 1926832 32 100.0 35 ................................ GGAACCTCAACTCTAGAGACCGTGTGTCCAATGAA 1926899 32 100.0 34 ................................ ACCTTAACGGTACTCAGTATTCAATTGTCTTAAC 1926965 32 100.0 33 ................................ CCCAAATAAAACTTATCCTTTACACGTTCACAG 1927030 32 100.0 36 ................................ TTAGCAGCTCCCGTAACGGTATTAGCCGCCCAGTAC 1927098 32 100.0 34 ................................ AGTTTTATTAATGTATTATCGGTATTCTTAGAAT 1927164 32 100.0 33 ................................ ACTAACGGCATACGCTTGAGCAACGTCACGCAT 1927229 32 100.0 35 ................................ ACATACATGATCTTCCCATGGGTACAGTTCCAGCC 1927296 32 100.0 34 ................................ CGTTTGACAACCGGTAAGCATTACGGCTAATGCT 1927362 32 100.0 36 ................................ AGTCAATACTCAGACGCGTTTTATGATGAAGTTCGC 1927430 32 100.0 34 ................................ CTCTTAAGTTAGACCTTACTGGCGTAGGTACACA 1927496 32 100.0 34 ................................ AGGCTTAGATTTGGGGCATAAAAAGACCGCCTCG 1927562 32 100.0 34 ................................ CTTTGGTTTAGTAGCCAATCACCCCACCTCTATT 1927628 32 100.0 35 ................................ TTTGTTTTGAGCTAAATCGGCATAAGCATCTCCCA 1927695 32 100.0 34 ................................ CAAGTCATCGCATTTTTTAGCTGCAATTCCATTG 1927761 32 100.0 35 ................................ TTTAGCTTGAGAGCACAAAAAGCAGCACATCCGCA 1927828 32 100.0 35 ................................ ACTTCTAATAAAGCACCTTACCCTGCCGTTTTCCA 1927895 32 100.0 34 ................................ GTATATGCCGTGATGGTCATCACTCTGCACTCGA 1927961 32 100.0 34 ................................ TTTAGCTGATGAGCTAAACATCACTCAACAAGCC 1928027 32 100.0 34 ................................ AAGCGCAATAGAAAATGCATTAATGCGCACTGAG 1928093 32 100.0 35 ................................ TTCCAGCTTAAGATGTTCAACTGCTTGCTGAATGT 1928160 32 100.0 35 ................................ TTGATGACTTCATTAAGGATCGTAGACGGGATAAT 1928227 32 100.0 35 ................................ ACTTCGTGATCACACCTTTATTTCTTAATCCCAAC 1928294 32 100.0 35 ................................ TGATAAGGTTGAAAAATACTCAGACCCATTAGCCT 1928361 32 100.0 32 ................................ CGAATAGACTTATTTTAGAGATATGGGCCGAG 1928425 32 90.6 34 ..GT.G.......................... ACAGCAAAGATAAATAGTAATGCCAGACCACCCA 1928491 32 100.0 35 ................................ GATATGTGAGCTAAGTTGTGCTAAGTTTTGGCAAC 1928558 32 100.0 36 ................................ AATATTTTAGTATGGTTGAAGGAGGAAAATTGAGAT 1928626 32 100.0 35 ................................ TTCCGGGGAATATTTAGACTACAGAGCCGGGGAAC 1928693 32 75.0 0 ......................A..ACTTTTC | ========== ====== ====== ====== ================================ ==================================== ================== 33 32 99.0 35 GTCGCTCCCTACATGGGAGCGTGGATTGAAAT # Left flank : GGACGGATATCCGGCCTTTATGTGGAAGTAGGTGAAGCAAAATTTTAGTGTTGATTACCTATGATGTAAATACGCAAACGGCAGCGGGGAGAAAGCGGTTGCGTCAGGTCGCCAAGCAATGTGTGAACTATGGGCAGAGAGTTCAGAATTCGGTTTTTGAATGTGTGCTGGATGCGGCGAAATTCCGTGAAGTCCAACATAAGCTGGAGAAGATTATTGATGTGGAGAAGGATAGCTTGAGGTTTTATTTGTTGGGGAATAATTACAAGAATAAAGTTGAGCACATCGGTGCCAAGGCTTCTTTTGATGTTGAGGATACGCTGATTATTTAGTGCGAACCTATAGTACACATAAAATCCCCGGGAGGTTCGCACCGCAAGATGTAAGGAAATTTGTTGAAGTATGTAGGAATGTGAGGACGGGGCTGTTGGTTTTGGTGTGATATGGAAGAAGATGGGTGGGAATTGTTCTTTAGGAGATAGTTTTTCCTGATTTTTGGT # Right flank : CTATTGTTAAGAAAAGTAAGGTTACAGTAAGGCTTGGACACCTTCGGTGTAAAATATCGGCTGTTCGGCTGCTTCTATGAGGTTGAGCAACAAGGCTTTCTTTACCAATGAAGCAGCTGGGGCTGGGCAATTCACAGGACCCAGCAAAAATCCCCCTCTCCCATACCTTGCAATCCCCGTCAAAAAAGCTATAATTAGGAATAGGTGGAAATTAAAAAGTCGCCGTGACCTGAAAGTGTTGCAGCACTTCCAGGCACGCGCAGGTGTACAAGGCACCTACACGTAACAGACTGTCCACGACGACATTTTTATTATACAATGCTGCCCGTTTATGCACAAGCAAGGTGCATGTGCTGCGGGTGAAGCGAGTGTAATGGAACGTCGGCAGGAGCAGACTGTGCGGCTTCACGCAGCAGGAGATTCAGCCTATTCCCGACCCAGGCAGCGGAAAGGAACTGTTCGCGTACCGGTTATTCGGATCGCTTTTCTGTTCACAGTCG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTACATGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.70,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //