Array 1 18785-17598 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSVQ01000033.1 Corynebacterium diphtheriae bv. mitis strain 645 Contig_139, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 18784 28 100.0 33 ............................ TGGGTCGAGGATAATAAGGGCAAGCTGATTGCC 18723 28 100.0 33 ............................ GGAGTCACCGTAGGAAACCTCGAATCAGACCTC 18662 28 100.0 33 ............................ CACATAGCAGTCATCGCGTTCAATGAGTGACGG 18601 28 100.0 33 ............................ CCACCCTCCCATGCTGGGATCTCGGGCCAGACC 18540 28 100.0 33 ............................ TTCGACTGCTTGGTGTAGGCATGTGATCGACTG 18479 28 100.0 33 ............................ CACATAGCAGTCATCGCGTTCAATGAGTGACGG 18418 28 100.0 33 ............................ CGCTGCCGGATACCGTCGCCGCGGCCGTGGACC 18357 28 100.0 33 ............................ CTCCACGAGGCTTAGTCAAGATTCCGCGTTCAG 18296 28 100.0 33 ............................ TGTAATTGTCGTGGCGTTTTTGTCGGCCCAGCG 18235 28 100.0 33 ............................ TCTTCTTGATTTTTACGGATGGTTTCCAACACG 18174 28 100.0 33 ............................ CATTGATTCTGTGACGATCGAGTCTACGATTTC 18113 28 96.4 33 ..............G............. GATCTTGGCGGGGCGGGTGTACCAGCGGTGGAC 18052 28 96.4 33 ..............G............. CTAGTTATGGGTGAGCCAACAACGGTAGACAGG 17991 28 96.4 33 ..............G............. TGTGGAAGAGTTTGATGCTGGTGATGCTGACGG 17930 28 96.4 33 ..............G............. TTTGTGACAACGTTTTGGGCGATTGTGGTGTTG 17869 28 96.4 33 ..............G............. TCAAAGGCGCTGGTCAGGGCGTCGAGGATTTCC 17808 28 96.4 33 ..............G............. GGCGCCGATCGAGCGCATAGCACCAATGCCTTG 17747 28 96.4 33 ..............G............. TGATGATTACCGCACAAGAAGTTGAAGCGTACC 17686 28 96.4 33 ..............G............. GTCGCCGGATTCGCCACCGTCGCCGCCGGCGCA 17625 28 96.4 0 ..............G............. | ========== ====== ====== ====== ============================ ================================= ================== 20 28 98.4 33 GGCTCATCCCCGCTAGTGCGGGGAAAAC # Left flank : CTGATCTTTCCCTTTTCGAGCAAGCTGACGTCTCATCTTGTTGAACCATTCAAGAAAATCAAAAGGTTCCACGTCCATGTCGATATCCATGGAATGGGCACGCCAGAAAATACCCAGCAAAAGCCGCATCACAGCATAGTCTTGAGCTGGGGACTCCCCCTGAATATAGGCAACCTGCACCTCCCCCGCGAAAATATCTCGTATTCCAACTGAAATCTGGTTACCTTGAGTATCAAGAGCCAGAATCCAGCGGATCTCCAGTAACGAAGCCACCACCAACTCCTTCCTGATTGTTTTAAAACTCCCAACTTAGGAAGCACTTTCTCTACAGAATACACCTTATAGATATTAAAAGTTAATTTTTTCAAAATTTTTTAGTAGACCCATCATTTACTGATTTCTCTGAATGAAAACACAGATCCCAAAACCCGTTCTTCAACAAAGATTCATCCACCCTGCTAGTGCAAGGAATCACGGCGGTCCAGTTCTCAAAGTCCCTG # Right flank : ACTTATCAAGCTGCACGTTTAGAGCCAGTTAGAGCTTATTACATATAACTTTGTTTCAGCAATTTTTCTGCTTCATCTTTATTTCTACTGTTTTAGGATCAGCCATTCACCCAAATTTGCTTAGTCCTTTCTTCTAGCCATAGGCTGGCATTGTTCCCTGCGATCAGGGATGAGCCTTTTTAATATCTCTACAAGATTTACATAGGCATACTTCCCCGCACCAGCGGGGTTTCCTTTTATGCGTCTTCCTTTGGGCAGACCTCCACCTCTAATCCACGTTCATTGGTATAACGCACTAGGAATCGACCTAAACGAGCCTCTCCTCTTTCGTCGAAAAACAACGCAACTTGGCCTTTAAGCAAACCGGATCGTTGCCATTCTGGTGGTGTTTGTGCTTCGAGCGAATCAATAACGGCATTAAAATCCGAATCTCTACGTGTCATTTGGGCTGGCAGACGCACTGTGTTTCCAGCCAATGCCTCAGCTTCTTTCCAAGTAAG # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCATCCCCGCTAGTGCGGGGAAAAC # Alternate repeat : GGCTCATCCCCGCTGGTGCGGGGAAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-12.70,-12.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //