Array 1 84868-86847 **** Predicted by CRISPRDetect 2.4 *** >NZ_QAZY01000005.1 Lactobacillus acidophilus strain DS10_1A DS10_1A_5_length_152280_cov_192.262690, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 84868 27 100.0 34 ........................... TAAGAGAAAACGGTGGTTTCCTCTTATTTTTATG 84929 27 100.0 34 ........................... TAAATCCGGACAACGCTTGCCACCTACGTATTAG 84990 27 100.0 34 ........................... TCATTGAGACACACATTGCGACGACTAAACTCTG 85051 27 100.0 34 ........................... TTTTAATGAAAGGTGCTAGTTTTGTGACACTTTG 85112 27 100.0 34 ........................... TGATTTTCCAGATTCGGCTACTATTTTGGCAGAG 85173 27 100.0 34 ........................... CTTAGGCTATTCCGCACACAATATGTGGCGTGGG 85234 27 96.3 34 ..............A............ TGACTGCAATGCAAGCAAGAGCGGACATAGCAAG 85295 27 100.0 34 ........................... CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCG 85356 27 100.0 34 ........................... TGCTGCTACGAGCGCTTTTGGTCACATTAAAGAG 85417 27 100.0 34 ........................... TCATTGATGCACCGGTACTTAACTCAAATCAAAG 85478 27 100.0 34 ........................... TGACTACGATATTTTCTTTTAATTATATCTTGGG 85539 27 100.0 34 ........................... CAATATCATCAGCATTTTTCACACCAGAAAATAA 85600 27 100.0 34 ........................... CGATTTGCGTGGCAAATGAATGGTTGATCTTGAA 85661 27 100.0 34 ........................... TATTCTTTTTCACTATCAAAATCAAATATTTCTA 85722 27 100.0 34 ........................... CACAAAAAAGCCACCTAGAAGATAAAATTCTTCA 85783 27 100.0 35 ........................... CCTTAACTAGTGCAAATTTAATATTTGGATAGCTA 85845 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 85906 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 85967 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 86028 27 100.0 34 ........................... CTTTGGCCATCTTCGGTCTTAAACTTAGCTAAAA 86089 27 100.0 34 ........................... CGGGTAAACAAGTCAGAGTTACTCGCAGCAAATA 86150 27 100.0 34 ........................... TTAGGCGAAACCCCGAGAGCAATTTCAAGCACGA 86211 27 100.0 34 ........................... TAAAACGTTGAAGCTTATTGTCCGCTTTAACGTA 86272 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 86333 27 100.0 34 ........................... TGGGTACCGAGGGTGGCAATATCTTCCTTATTTA 86394 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 86455 27 100.0 34 ........................... CGGAATGTATGATAAAAATTGGCTATTTGCCTAA 86516 27 100.0 34 ........................... TATTGATGCAACACCTAGCGCAAGTCAACCTGGA 86577 27 100.0 34 ........................... CAGGGTGGTTTTAAGTACGAGATTGACTACGATA 86638 27 100.0 34 ........................... TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGGA 86699 27 100.0 34 ........................... TATATGCGACTTATTTCTTACGATGAGATTCCAA 86760 27 92.6 34 ...........A.A............. TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTA 86821 27 74.1 0 ....T..T.T.A.A........A.C.. | ========== ====== ====== ====== =========================== =================================== ================== 33 27 98.9 34 TTTTCTCCACGTATGTGGAGGTGATCC # Left flank : CGTGGTTGTCTGCAGCAAAGGCTATCCAACGCACCCAGCACCTAATGTTAAGATCGGCAAGCTGCCTGAAGGTGCTAATACCTATATCGATTACGCCAATGTTAAAGGTGATTTGGAAAACTTGACGGGTGATGGTGGCCGCTTGTTCATGGTGATTTCGGAAGCTGACAATTTAGTTCAGGCACAAGACAATGTTTATTCTTATTTAAGTAAGCTTGATCTGCTGGATTGCTTCTACCGGCATGATATTGGTAATCGTGCTTTGGGAGATTTTAATATTATATAATGTCTTAACTTAATGACATTGATAAGGCTACCCATATTTTGTTTATTTGTAATCCTGTGAATATAATAGCAATTTAAAATTATTATATGAGCTAGATATATGTAGAAGAATATTTGATATAATTGTGTCGATGATTTGGTTGGGGAAATGCAAACTAAAGAAATTTTGCTTTTTAGTAAATTTAAAATAGCTTAACGATGGGATTCCTTTAGTG # Right flank : CTGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCTCCACGTATGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //