Array 1 1169876-1170453 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGKX01000002.1 Enterococcus sp. 7F3_DIV0205 scaffold00002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 1169876 33 100.0 33 ................................. AAAAATTTCCATAGAATCTTTGTCCGGAATATT 1169942 33 100.0 33 ................................. TATCCTCATCGTTGACCCCCTAATAATGAAAAG 1170008 33 100.0 36 ................................. CTTTTTGTAAAGAGTGATGGTGATTGCATTTATGTC 1170077 33 100.0 36 ................................. TTATATAAACTTCGACCTGTAACAAAATAAATAAAG 1170146 33 100.0 37 ................................. TCGGACGGATCAATTGAATTAAACATGAATGTTCAAT 1170216 33 100.0 35 ................................. TAGGGGGTGACACTTTTTTGAATAACGAAGACTTG 1170284 33 100.0 36 ................................. TGACGAAGATCTCTTTCAAGAGGTTCGAGAACTTTC 1170353 33 100.0 35 ................................. TTTACTGTGAACTTAGGTACTTTCTTGTTGTTAGT 1170421 33 97.0 0 ........................T........ | ========== ====== ====== ====== ================================= ===================================== ================== 9 33 99.7 35 GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT # Left flank : ATGGTTACCCGCCATTTTTATGGAAGTAGGTGAAAAGTATGTTAGTGTTGATCACTTATGATGTTGCAACAAGTTCGAAAAATGGAACCCGTCGTTTAAGAAAAGTCGCTAAGAAATGTCAAGATTATGGACAACGTGTCCAAAATTCTGTTTTTGAATGTGTTGTTGATGCGACGGAACTAACAAAGTTGAAAAAAGAATTAGTTGATTTAATTGATGAAGAATTAGACAGTTTGCGAATTTATCGATTGGGAAATAACTATCAAAAAAAAGTAGAACATATAGGTGTAAAAGAAAGCTTTAATATTGAAGCACCTTTGATATTTTAGCACTAACATTTTGGTGCGGACCCAAAGTGCACATGAAAACACTGGGAGATCCGCACCAATAAATAGGTGTTTAACATCAATAAAAAGCTCTTTTTCTCATCTGAATTTAATTTTTAAGTTGATTTTTTGTGAAATAGCAGAAAAATGTCATGTATTTTTGTTATTTTCACG # Right flank : TATGTCATGCCTTTTTACTTGGGTTGTACTAATGTAGTCTAGCTCAGTTTAAACAGTATATCTTCCGCTCTACTAAAAAAACACGAACCTCTATCAAAACTGAAGAGCGGGAAACAAAAAAACCTAATATCTCTATTAGGTCTTTTTTGCTTCCTAAAATTTCTACATCACAAAATGGAACTAGAACTTGCATTCATAAAAGGTATAATAGAGTGACATGATGTCATTGTTATTGGTACTTCGAGAAAAGAATTATCCAGATAATTAACTGGACAGGACTTAAACATATATACTCACATAAAAAAAGACCTCCGAAATCAAAATCTCAAATAGTCTCTAGGCATAAATCTGAAAATAGATTATTTTTTTTGTTTTAAAAATTCTTTTATATTTGTTATTTAAAATAATATTTTCTTGTTATATTAACAAACGAGAAAATTATGGAATTGCCGTGATATTTAGGTCTCTCAGCTGATGATATATTGTTTTTTTCAGTTTGT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.61%AT] # Reference repeat match prediction: F [matched GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.70,-5.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 157919-158764 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGKX01000001.1 Enterococcus sp. 7F3_DIV0205 scaffold00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 157919 33 100.0 36 ................................. CTTCTCCTTCAGTTCGTGTAGGAGACTGTTTGCTGC 157988 33 100.0 36 ................................. AGCACGTCTAGGATTTCGTCCTCTAGTCGCTTCTAC 158057 33 100.0 35 ................................. TTAAGATTGCATTTTGTACTTTAGCTGATGTTAAA 158125 33 100.0 35 ................................. TTTCTTCGGACTGGCGAAAGATAAAGGGTATATCT 158193 33 100.0 34 ................................. TATAACAATTACTTAGGAGTGTTTTAATGAAAAA 158260 33 100.0 35 ................................. GCTTTTAGGAAATAATATTGATATTACAGGGATTA 158328 33 100.0 33 ................................. AGCGAACGCTACAGGGGCATCAATGCAGCTAAG 158394 33 100.0 33 ................................. TTTTTTTACCAACACCATTAGAGTTCCAGCCAA 158460 33 100.0 34 ................................. AATCTGTGCTTCGTTTGCCTCCATCTTAGTCGAG 158527 33 100.0 35 ................................. TGTTGTACTAAATAGACAAGCTCATCTAGTTCATC 158595 33 100.0 35 ................................. ATCAAACGAGTAAATGGGGAACTAACTGCTTATAA 158663 33 100.0 33 ................................. ATTTACTGCTTTACAGGAAGCTTTGACAAAAAC 158729 33 87.9 0 .......................T.C..C...A | ACA [158751] ========== ====== ====== ====== ================================= ==================================== ================== 13 33 99.1 35 GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT # Left flank : AACGTTTTGAATTTCTACAAAAAATGTGGGTGAAAGAGGATCAGCAGTTATCCTTTGATTTTGAAGAACCATTATTAGTTGCGGAAGAAAAACCAGAAATTTTTGAAAAATACTCTCATGTAGTTTGGCAAAAGCGAACTTTAGGAGAGGTAACCCATATTTTCAGCCATCTAAAATGGCATATTCTTGTGTTTTATGGCCGACAAACAGGCGTAACGGCTCTGGATGAAAATCAAGAGTGGGCAATAAAAGACGAATTTTCCAGCTATGTGTTTCCAAAACCTCAACAAAAAATGTTGGAACTGTATAAAAAAGAATTTAAAATAGAAGAATAATTTTTGGTGCGAACCCTCAGTGCACATAAAATCACTAAGAGATCCGCACCAAAATTTTGCTGAAATTAGCAGAGGAATAACTCTTTTTCTCATTTTAATTTAATGTTATATTAGTTTTAGTGTTGAAATGGCGAAGATAGGTTGTGTATTTTTGCCAATTTCACA # Right flank : AATATCCAAACTTTGACATCAAAAAAACTAAAATCAATCTATTTATTTTAATAGATAATTCTCATTCCTATAAGAAACCAAACTCCTTAGTATGCAAAGCTGAAAATTATGATATAATTGTATTGATATCGGTGTAATGAACACCCAAACGAAGAGCAATCAGCTTTTAGAAGTGATTTTTCGTACTAGGGAAAGTTGGGGGACTATGGCAATTCCAAAAGAAGGTGAATTTGTAACGATCCAAAGTTACAAACACGATGGGCATTTGCATCGAACATGGCGAGATACTATGGTATTAAAAACAAGCGAGTATTCTTTGATCGGTGTCAACGATCATACTTTGGTAACAGAGTCTGATGGGCGTCGTTGGGTTACTCGGGAACCAGCTATCGTTTATTTCCATAAAAAATACTGGTTCAACATAATAGCGATGATTAGAGAGAAGGGAGTTTCTTATTACTGCAATTTGGCGTCACCGTATCTTTTAGATGATGAAGCGT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.61%AT] # Reference repeat match prediction: F [matched GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.70,-5.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 215520-215750 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGKX01000001.1 Enterococcus sp. 7F3_DIV0205 scaffold00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 215520 32 100.0 33 ................................ GTTCAGCTATTGCTACACCAGACAATGCAGCGG 215585 32 100.0 36 ................................ ATTACGGATGGAAGCTGACAAAGTGGGGAGAGACCT 215653 32 100.0 34 ................................ TAAAGAAATGCTCATTGATACTTTGATAAAGACT 215719 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 4 32 100.0 35 GTCTCACTCTTTATGAGTGAGTGGATTGAAAT # Left flank : GGTAATGACTAACGCTCAAGCGGGCGAAAAAACAATGACGATCAGTGCTATTCATGCAGGAAAAGTATTTGTTGATATTTTAGGAAATAACGATGCAAAGGTAACGTTGGATGAAACAGGTGCTGGGACATTTCCAGTAAACGGAGGAGAAATTTCTGTTTACGTAAATGAAGAAATTGTGGCAAGATTGAGTAGTGGGATTGAAGGTATGGTTTTGAGGGATGAATGATTAAAGTGAAGTAGTGATTATTTTCAGTGAGTCATGTGTAGAAATAAAGCGTGACTTCTGTTGGAAGAATAATTATACTAAATGTATAAGCAATAATTAGACTATAAACTTGGTGCGGACCCTAAGTGAACATGAAATCACTAGGGGATCCGCACCAGATTTTAGGTGGGTATTGAGAGGAATTAGCGTCTTTCTCATTAAATTCACATTTCAGATGGTCTTTGTTAGTGGAAAAAATCTGGAAATGTTCGTTTTTTGTTTCTTTTTCACA # Right flank : TTTGCGGTGTTTCCCAATCTTGTTTGTTGCTTGTAAAGTCTCACTCTTCACGTAGTGAGCTTTTTTATTTCCCCTCCAAAATCTTTTGAAAATAAACAAAAAAATTCAAGGTGATTAAAATCATAAAAAAATTTTGTATGTTATTGCTCAAGGTTTGTTCAATCTGTTCAGCTTTTGTGTTTTTTTTGGTATACTATATAAGATTGAAAAAAGAGAGAGGACGTTGATGATGGCACAAGAAAACGCCTTGATCCAAGGTATGAATCCGAGACAAAAAGAAGCCGTTCTACATACAGAAGGGCCTTTATTAGTTATGGCGGGTGCAGGCAGCGGGAAGACAAGAGTTTTAACTCACCGTATTGCCTATTTAATTGAAGAAAAAGATGTTAATCCATGGAATATTTTAGCAATCACATTTACCAATAAAGCCGCAAAAGAAATGAGAGAGCGGGTTGGAAAATTATTAGAAGTTGGCGGAAACGATGTTTGGGTCTCCACAT # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACTCTTTATGAGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.50%AT] # Reference repeat match prediction: F [matched GTCTCACTCTTTATTGAGTGAGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 526897-527206 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGKX01000001.1 Enterococcus sp. 7F3_DIV0205 scaffold00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ===================================== ================== 526897 34 97.1 35 ..........G....................... CGGTACCTCTAGCAGTATACGAAAGCTGTATAAAA 526966 34 100.0 37 .................................. TAGAATATGCCTTACTAATCGATACGACATCACGACT 527037 34 100.0 35 .................................. AGATAATCAGTACATAAAAAAATACCGTTATCATT 527106 34 100.0 33 .................................. GCCCCATGTGAAGGTTTGTGTTTTACCATCACC 527173 34 79.4 0 ..........G............CATG...C..C | ========== ====== ====== ====== ================================== ===================================== ================== 5 34 95.3 35 GTCTCACTCTATTATGGAGTGAGTGGATTGAAAT # Left flank : TGGTGATGGCGGTGCAGACATTTTACCATTATTTCGTTTAAATAAACGTCAAGGCAAATCTTTATTGAAGGAACTAGGTTCACCAGAGGAATTGTATACAAAGATTCCAACTGCAGATTTAGAAGATGACAAACCGCTGGTGGCAGATGAAGTAGCGCTTGGGGTGACCTATGACGATATTGATGATTATGTTGAAGGAAAAGCAGTATCGGAAAAGGCAAGAGAAACGATCGAAGGCTGGTATAAAAAAACGCAACACAAGCGACATATGCCAATTTCAATTTTTGATGATTTCTGGAAGTAAGGCTTGAATAAGGAAATAGATATTTTCAGGTGCGGACCCCAAGTGACCATGAAATCTCTGGGAGATCTGCACCAAAATTAGAGAGGAAAAGATCTCAATTTTCCGTTTTTCTCATTATATTTTAATGTTATTCGAGATTTATGTGGGAAATTGGTGATTATGAGAGTTTTTTTGCGAAAAAACATTATTTTTCACA # Right flank : CCTTGTATAACCATTTTGATTGGAAAAGGTATTCTTGCGTCAACCCAATATAAGTGATCACATTCAATCTAATAAAAAAGAAAGACTAAAAATTTAGCCTTTCTTTTTTTGCACCAAAATTCACTTTAATGTACCTTCATTTTGTTCAAATGGTTAAAAAAAGTGTAAAATTAACCTAGTTATCTGAAATAGTGCATAAAGTACTCTACAATTGATTTAACAATAGTAATAAGAAGGTGAATGAAAATATGAAAAAATGGTTTAGGAAAAAAAGAGATATAGATAGTGAGGAGTTTCTTTCATCTGAAGAAAAGGTGCAAAAAATAAATAATGCTGATATTCGGATTCCTACTGATATTAAAGGACTTTCCAACCAAGAAGTGGAACAACTTTTTGCTCAGGGGAAGACCAACAAAGAAGTTGAGGATCTATCTAGAACAACAAAACAGATCATTTTAGATAACTCTCTAACATTATTTAACTTTATCAACTTGTTTTTA # Questionable array : NO Score: 8.82 # Score Detail : 1:0, 2:3, 3:3, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACTCTATTATGGAGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.76%AT] # Reference repeat match prediction: F [matched GTCTCACTCTATTATGGAGTGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.20,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 1760913-1760270 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGKX01000001.1 Enterococcus sp. 7F3_DIV0205 scaffold00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 1760912 33 100.0 36 ................................. AATGCTGCTTCTTGCTCCATTACTTGTGTCTGTGCT 1760843 33 100.0 35 ................................. AAGTCTAACTCATCCGGCGAAGCTCGAAAGTGGCA 1760775 33 100.0 34 ................................. TGAACATCAACTGCAAAACTGGAAATCAACTGAT 1760708 33 100.0 35 ................................. CTATTTCGTTTAGGCTGTTAGGTTAGTTCGCTTGC 1760640 33 100.0 34 ................................. ACAGGTAATTGGCAACAAGCTTGGCAAGGTTTAT 1760573 33 100.0 34 ................................. GCCGATTTGTCTGAGCTGCCCTTTGATGTCTTTG 1760506 33 100.0 34 ................................. ATGCTCCGCTATGTGTATGGCTTATCTGTTCCGC 1760439 33 100.0 35 ................................. GTCAAAAACTGCATCAGGAAATTCTTTTTTTAGAT 1760371 33 100.0 35 ................................. AGCAATCTCCTTAATGGTCCTAATTCCCAACCAAT 1760303 33 84.8 0 ............A.........ACA.......C | T [1760274] ========== ====== ====== ====== ================================= ==================================== ================== 10 33 98.5 35 GTCTCACTCTATTTAGAGTGAGTGGATTGAAAT # Left flank : TAAGAGGAAATGATTTTGGCGGCATCAATAATTCAACAGTTGTGATAGGAAATAATAACAAAGTCACGAATGGAAAAAGTGAAGATATCGATTGGGATACGTTTTCAGCAGAACTTAAATCATTGTTAATGGCGCTTCCACAAAATAGTGAAGAATTTCAAGCTTGTATGGAATTGCTGACGGAGTCGACTTCAAAGGATGAAGGTAAGGTAACGACATTTTTGAAAAAGCATGTGCCCCAGTTTACATCAGATGTTTTTAGTAGCTTAGCAAGTACACTTCTTTCTGATACAATCAAGAAATTGATGGTCGGTATGTAAGCAAGTTGGCAAAGTAAGTTAGGTGCGAGTCCTAAGCTCACATGAAATCACTGGGAGACCCGCACCAGTTTTTGGTGGAGAAGAAGTATTTTTAGCAGGATTTCTCATTGAAATCACATTTTTCGGTTTTTTTTTAGTTGGGAATATAGTGTTTTGATTGGGAAATACTGTATTTTCACG # Right flank : TAACAAATAAAAACTATTCAAAATCATTAATTATCCGAGATGGAAGCAGTTCACCATACATAATTGTAATAATCAAGTTGTAAAAGAGATGGACGCGGTTCCTATTTTTCGATACTATGAGTATACATAGGATTTTTATATAAAAATCCTATGTATGTTTTTTTAATCAAGGAGGAGTTACAGAATGAAAAAATCAGTAAAATCATCAATGATTGTATTGGCTCTAGGGTTGGGATTGTCGATTGGAACCTCTGAAGAAGTGGAAGCGGTGGCTGAGCCAGCTTACTCTTATTTTAATGATATTGGAGTAAGAGTTTCTTTATTTTCTGGCGTTGAAAAAGTTTATTCCGATCGTTACCAAGCTGAGTTGACTGAGTTGAGTGAAGAGTATGAGAACGGGTTGATTACTGGGGAGGAATTTGATAAATTAGTAGATCAACTGAATGAAAAGGATGAAAAAAGTTTTCTTGAAAGAGAAGCACTGTTTAATACCTATAGTT # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACTCTATTTAGAGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.64%AT] # Reference repeat match prediction: R [matched GTCTCACTCTATTTAGAGTGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.60,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //