Array 1 12092-13526 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJDFS010000033.1 Bacillus sp. DFI.2.34 EIGHBEBE_33, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 12092 30 100.0 37 .............................. AAATGTGGACTTTCACGTCCCACATTATGGCGTGGTC 12159 30 100.0 37 .............................. TATGGAAACTCCTCACAGAATCCCAAGGCCGATTGTT 12226 30 100.0 37 .............................. TCACAACGATAACAATAATGATAATAGAAATTGTTTT 12293 30 100.0 36 .............................. ATAGAAGCCCAACATGGAGTAACTGGTTTCGCGGTT 12359 30 100.0 36 .............................. TACCATTTTATTCCGGAAGCACCGTCCGTAACTTCA 12425 30 100.0 38 .............................. ATGCGTGAGATTAAGTTTCAGGTATTTACAGAAGATTG 12493 30 100.0 37 .............................. AAAGTAGCGCCAAACATAAATTTTTTTAAAGATTATT 12560 30 100.0 39 .............................. TGCCCTATCCGAAGCCGATAAAGCCCGTATTGCGGCAAT 12629 30 100.0 37 .............................. AAACAGAACTTCCCGATATTGCTGAGAAGTACAGCAA 12696 30 100.0 36 .............................. GCGATATTCACTTCCACAATGTTTTTGTTTTGTTTT 12762 30 100.0 37 .............................. GACATTACAGAACTATCCGTAGATGATGTTTCCGAGT 12829 30 100.0 37 .............................. TACGTGTGGGTTGCATTATTAACACTATCCACTCTAA 12896 30 100.0 36 .............................. CCGTATGTCAGCTAAAACATCTTTTTCATCCTCAAA 12962 30 100.0 37 .............................. CTGATGGAACAGGGGACGGGAAAAACTCTGGCTGCAA 13029 30 93.3 39 .....C.......................T CGTTTCCGGGTTGCGGTTGAAGGGAATAAAATCGTCCGC 13098 30 90.0 35 ...C.C.......................T TATCTATCCATGTAGCCCCATCAGTAGTTGCAACC 13163 30 90.0 37 ...C.C.......................T TCATATATATCAAATCAATTAACCAGTTAGCAATTTT 13230 30 93.3 36 ...C.C........................ GACAGCGGAGAGTACACCAGACACTTTGACGCTGAG 13296 30 100.0 37 .............................. TTGACGAGAAATGTCTCGGCGAATACTCGGCGACTCT 13363 30 96.7 36 .....C........................ TGTCGCGGATGTCGGCTGCCATTTTCGACGATTCAG 13429 30 96.7 39 .....C........................ GAGAATCCCAAGAGTGTTTAAAAAGTCTGATGGTGCCTG 13498 29 83.3 0 .....C...-.C.....A..A......... | ========== ====== ====== ====== ============================== ======================================= ================== 22 30 97.4 37 GTTTATATCTTACCTATGAGGAATTGAAAC # Left flank : AAAATCAAAAAACAAATGGTAGTCATGGTGAAGTGGAAGATGAAGATAGAGGAATAGTAGACGATTTACGAAATTATTCGGATTTGTTAAAAATTTTGCATACCATAAAAGACAACCGAAATGATATAAATCATGCGGGTTGGAGAAATAACCCACTTTCCTCGAAAGTACTGGAAGAACATTTTATAAGCATGTTTGAAACATATAAAACGCAATTGCTAAATTACTATGGTAAAAGATGAAATGCCATGTAGGTCGGTTTTGCTTTTTGGTTGAACTTTATTCTTTTTATGATTAGGCTGGCTGAAAATATTGTCGTCGACCTCAAGTAGTGCACAAATCCCGGGAGGTCGACGACAATTCGGTTTTTAAAATCATAAATAAAAATGCTGAATTGACGTGCATTATGAAAATATAATTGCTAAAAACCAATATTTCTATTATAATTAATGCAAAAGTAACAATACATAGAAACCTTATTAAATCAAGGACCTTTTGGG # Right flank : CTTGGGTGGAGTGATTAAGGGAATTTAAAGGAAGTAATAGAAAGCTAGAAAATTAATCAAAAAAGTAATGTTTATATAATTGGAAACTTATTAATATTTTTTCTTTTTTATCGAAAAAGACCTGCCTTGGCTTTAGATATAATATGAAAGATAAGGAAAATAAAATCCTGATTTACGATGACTCCTGTACAGAACGAACAATAGCCATTATTGAAAAATCTTATTATCGTGATTTAAAAATTGCTGAAATAGCTGAAGTATTATTATAAACAGATTCTATCTTTCGCAAATTTTCACAGGAAAATCGGGTTATACATAAAAAATATATAATTGATTTTCGAATTTCACGTTTCGGAGAGGTATTATTTTTTTAAATTGGCCTATAGAGAAGGTTGGTAAATCAGTTGGGTTTAAAAGGTTCGCCTTTCACAAAGTTTTAAAAAAGATTATAGTATCACTCCAAGTGAAAAAAATTATGGTTAAATGAATGGGGGTCTGCT # Questionable array : NO Score: 9.13 # Score Detail : 1:0, 2:3, 3:3, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATATCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 2869-3446 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJDFS010000011.1 Bacillus sp. DFI.2.34 EIGHBEBE_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 2869 36 100.0 31 .................................... TTTTAATGAGCGTAATGCACTAATTCCATTA 2936 36 100.0 30 .................................... GTATTCGGCGGATTTTGTGCGATAATCTGA 3002 36 100.0 30 .................................... TTCTGTGGAAGTCTAATTCTTGTTCGTAAA 3068 36 100.0 30 .................................... TATAGAACACCATGTTGGATACATAAGGCG 3134 36 100.0 30 .................................... TTATACAATTGAACATTCACCAATCATACC 3200 36 100.0 30 .................................... ATGAAAAGTTGTTAGAGGCGGCCAAAGACC 3266 36 100.0 30 .................................... GCGCGGATGGTGATATAATAGTCGTACAGC 3332 36 97.2 40 ..............T..................... GTGAATAGGTAATTTTTCGAGATTTCAATCCACGCACCCA 3408 35 86.1 0 ...........-....G.........T..T.....T | T,GTT [3424,3433] ========== ====== ====== ====== ==================================== ======================================== ================== 9 36 98.1 32 GTTTTGGCACTCTTCCAGTTTTGGGTATAGTAAAAC # Left flank : TTTGATCATTGACAAGTCATTTGAAAGAAAACGGTTAATAATAATTGAGTTTCCTGAATTATACACCAGTAAAAGAGAAATGGATTTATTTTGTGATATAATTAACAGATTAGTAAAAAAGGGCGTACATTTTTTAATAGTTACGAACCATTCATTATCTGGAAATCTAAATTATATATACAAGGGAAAAATTATTAATAATGCTGAGTTGGAAAAAATAAAAAGAAAAGTAATTAATGAGATACCATACTTTTTTGATGATTCAATGTATATGGTTGCAAAAAAACATTTGTTAAGACTTGTGGATAACATAGAAGATGACGAACGTGAAATCAAGTTATCCACAGACCTTGAGAGTAGTATATCAATTGCAATTTATATTATGCTAAAGCATTTAGGTATTGATTCTACAGTTGATACATCATCAATACCAAAAAATTTGTCCGCATTTATTAATTCATATACTCCAATGAAGTGAGATATTGTATAATAAAAATGAG # Right flank : TATCCCCACATTTGAACATAAGTGGGGATTAAGTATTATTTACTTTTAAATAACTTTTATGTTTTTATCATCTTTATTGCTATCTGTGTTAATTTACTTTTCCTACAACCTCTTGTTTTTCATCTGCCGCATATACAGTCACTTCTTTTTCAATCCCCTGTTTATTTACATACCAATTCGCCGCTCCGACAAACAATCCGCCTCCAACAATATTCCCAAGTGAAACAATGAGCAAATTAAAAGCTGCTCCTGTCAAGGTAATAGTATCCGGGTGAGGGACTGATAAAGAAATAGAAAATAACGCCATGTTGGCAATACTATGCTCATAACCGGAAACAAAGAAAGAAGTGACCGTCATCATGATCAACATAACCTTTGCTGCAAAATTGTCGGTTTGCAACGGGAGCCAAATGGCCAGACAAACAAGCCAGTTACATAGAATACCGCGAAAAAACATTTCCCCTGTCGTTAATCCAATCTTGCCTGTCACCGCACTAAAT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGGCACTCTTCCAGTTTTGGGTATAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.50,-2.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 9094-9256 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJDFS010000069.1 Bacillus sp. DFI.2.34 EIGHBEBE_69, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 9094 30 93.3 37 A.A........................... TTGCATGTGGAATACAATGATCCGTTTTTCCGAATTG 9161 30 100.0 36 .............................. AATATATTCCCGCGGGTACTTCATTTAATGGGATTT 9227 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 3 30 97.8 37 GTTTATATCTTACCTATGAGGAATTGAAAC # Left flank : ACAATTGATCATCGGCGAAGTGAAAAATCTACCCACTTTAAAAAGACTGCCCATTATCAATTTTTTATTTGGACACGCTAACAGAGATGGGGATCGAAGCGATAGGTGAGTGAATGCCATTTTCTAAGAACGTCGACGCAGAGCAGTTGAATGGACGCCCGAAGAGGAAGAGAAACTGGATGAAACGAACCAAGAGATTCAATTTCTCATTTTAAACAGCGAAAAAGCATATAAATTAAGTTCAACGTTGGAAGAAAAGGAGAAAAATACATTGTGGAGATAGGATAATAATTTTTCTCTGACTTTTTGTCGTCGACCCTTAGTCGTAAATGAACCTAAGGGAATTGACGACAGTTACTTTGTAAAATAATAATTGGAAAAATGTTTAAGCTATCTGGGGTTGGAAAGTTCCAATAGGCTAAGAATAAATTCTCCATTATTGTTAACGCAAAAGCAACAATACTTAGAAACCTTATTATATCAAGGATCTTTTGGGGTTT # Right flank : CTGTCAACGGTGTAGATGGAGTAGCTGATTTCAGAAAACAAGTCAGTGTTGGATAGGTATAGCCATTATTATGTAACTTTTATTATCTCGCTTTTGTTTTCATTCAACCATTAAAAAAGAGTGACATTAATAACAGTAAATCATTGTTAGAGGACAAATTGATCTAGTAGGTTTTTGTATTTTTCACAGAAAATATGCGGTTTCTATGAAATGAAAAAATATCGTAAACAAGAAGGAATTTTTCCGCTTTTTGTCGAATTAAAGAATAGAATAACAGTTTTAATCTAAAAATGATAACGTTCCCATCTTTAACAGAATAGAAACTTGTTTTTGCTGCTGCAGATATAAGACTATCCCTTCAAGATTTGAATCAACGAAAGGAAAAGATGGGATGTGTGCTTCCTACACACGTTCAATTGGTTCGGATGGGCATTGTTTGTCGCAAAAGTGTTGCCAGATGAATCTAGCTTTTAGAAAAGTGTTCTTTCTATGTTAGTGGG # Questionable array : NO Score: 8.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATATCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.37%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 41459-36426 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJDFS010000016.1 Bacillus sp. DFI.2.34 EIGHBEBE_16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 41458 36 100.0 35 .................................... CATTCGAGAAAGGAGTCTGGTTCTCCATTGCCATA 41387 36 100.0 35 .................................... TCCCAGTTGCTGTTGATTGGGATTGAGCGGTAGCC 41316 36 100.0 38 .................................... ATTAAAAATGAATGGAATGGTTATTGCTGCAGATATTC 41242 36 100.0 37 .................................... ATTCAAAATTCGAGCAAGACTTTTCAAAATCTTGCTC 41169 36 100.0 37 .................................... GAAAATTTTGCGGGGCTATATAAGACTCAACAACTTC 41096 36 100.0 34 .................................... AAAAAGAAAGTGGATACACCTATAGAGACGATCT 41026 36 100.0 37 .................................... AACACATCTTCGGTTGGATCCTGTGTGGTTGTCGTTG 40953 36 100.0 39 .................................... ATGATATTTCTCCATCCTTAGTTTTGTGTATGCAATACT 40878 36 100.0 36 .................................... GGTCTGAAATTCTAGGTGGTGATGATAATTGTGGCA 40806 36 100.0 38 .................................... ATGAGATTTCCGACTTAACTAGGAAACTTGAATTTACT 40732 36 100.0 37 .................................... AATAAAAATTGGGAGGAAAGTAGTATGGGGCGTTTTA 40659 36 100.0 40 .................................... GATTTTCTGCAAATCGAATCATGACTTCTGCTTTATGTCG 40583 36 100.0 39 .................................... AAAATATGATGATAGTTTTGTTGGAGAAATTCATCTTTC 40508 36 100.0 38 .................................... CGCCAAGAAAATGGTGTGTTTGTCGAGCATGGTCGTGC 40434 36 100.0 35 .................................... CTCAAGTTTGTCCAAAATGTAGTGAAAACATCAAA 40363 36 100.0 35 .................................... CTCAAGTTTGTCCAAAATGTAGTGAAAACATCAAA 40292 36 100.0 36 .................................... CATATTTTGCCGATAAATTTCCGTCTATTTGTTTAA 40220 36 100.0 36 .................................... GATACCGTATAGTTCGACTCTATAGAGAGGTGAAAA 40148 36 100.0 35 .................................... CTCGTCAACTCCGCTTAGGACCGAAACCACTTGAA 40077 36 100.0 37 .................................... AAAAAGTTGTACCGTTTTAGTATTGGGAAGTAATAAC 40004 36 100.0 37 .................................... ATATCAAACGGTTAACTTATCAATAATCGTTTGTTTT 39931 36 100.0 36 .................................... CATGTCAACCAAGCGGTTGCTGAGTTTTCTTTCATA 39859 36 100.0 36 .................................... AGAATACCGTTCAAATAATTTATTAACCGTTGTTCG 39787 36 100.0 38 .................................... ATCAAATGATCGCCCCTTTAGTTATATTGTTAGTATCG 39713 36 100.0 36 .................................... GAAAAAAGGATAATGCATATTCACCAGTTGAGTGAT 39641 36 100.0 36 .................................... CTGATGAAGCTGATACTGCCGGTAAACTAGCAGGAA 39569 36 100.0 36 .................................... TTTCAACAGCTACACTATTTTTCAATCCAACTTGAT 39497 36 100.0 35 .................................... GGATGGCTTAAACTTAAAGCTAATATTCATACTCT 39426 36 100.0 36 .................................... ATACAAGGTCCGCAAGGTGTTAAAGGTACGGACGGG 39354 36 100.0 34 .................................... TTTACGAGCTATTAGATGCCGAAACAGCGATTGC 39284 36 100.0 36 .................................... AGCTTGGATTGAATCAAACAATGGTGGTCGAGGTTT 39212 36 100.0 35 .................................... AATGTACATTAAACATAATTCGATTGCCGGATTTC 39141 36 100.0 34 .................................... TAGATGTTGAAAACGGCGGTTTTGTCTATTATCC 39071 36 100.0 37 .................................... CGGGAGCAGTTGGATTTAAAGACGTTCGTGGCTCTCT 38998 36 100.0 40 .................................... CTAAGCGGATATGTTCAAGTGGAGGTAATATGTCGGTAAC 38922 36 100.0 34 .................................... TAGATGTTGAAAACGGCGGTTTTGTCTATTATCC 38852 36 100.0 37 .................................... TGTCCAAATCCGCATTGGTTCCTAATGCTTCTTTCCC 38779 36 100.0 34 .................................... TCGACAATCACGCCAATTTCTCCGCGATAGTTTG 38709 36 100.0 40 .................................... TTTGTAATTTGGAACCTTCACATCCAGTGTAATCACCAAC 38633 36 100.0 36 .................................... GAATCGGCGGCGGAATGTTTCTCGGCGCGTTCCGTC 38561 36 100.0 37 .................................... ATTCCGAAGCTGCTATCGCTTGGCTGGGATTTAGTTA 38488 36 100.0 36 .................................... CGGACGAGCAACGATTTGACGAGTTTTTGCGAATAT 38416 36 100.0 35 .................................... CAAAATTCGACATGGAGGTTAAATTTTCCTACGAG 38345 36 100.0 37 .................................... GCCAATACTTTCGTTTGTGTGTTGTCACGACTAAACA 38272 36 100.0 35 .................................... AACACTATCACCTCCCTAAAGGGAAAATATGTTCG 38201 36 100.0 39 .................................... GTAACACAGGGTACATTAAGGAATTCAACCCCGTAAACC 38126 36 100.0 36 .................................... TTCTGGACGACCGTTAAATACTTCTATCCATATTTC 38054 36 100.0 37 .................................... AAAAAATATAAAAGTTATCAGTGCCGAATAGGCGTAG 37981 36 100.0 38 .................................... TTATAATTATCAATTGGTACCAAGCAATCTCATAATTG 37907 36 100.0 37 .................................... TGGACGCAACACAAGTGTACAGCGGCATGTACGGCCG 37834 36 100.0 35 .................................... TTATACCGTAAAAAATTTTGGATTTGATGTCACCG 37763 36 100.0 36 .................................... TGGTAATCCTACCTCATTCCAAAACTTTTGTAGTTG 37691 36 100.0 37 .................................... TAAAACGAAGATTTACCGAGCGATTATTTCGTTCCCC 37618 36 100.0 39 .................................... TTGATGAACCACGTGAAGAACTTGGAACAGCAAAAGGTG 37543 36 100.0 35 .................................... ATCAAAACGACGTTCATTCTCCGCTTGCATGAGAA 37472 36 100.0 36 .................................... TCAATAAGCGATTGTATATATTCCATGAATCCTGTG 37400 36 100.0 38 .................................... ATGTACGACATGCACGAATTGGGCGTGTGGGTATCGTA 37326 36 97.2 36 ......................C............. TGCTAAACGACAACTTACGTTTTATTTCGTCAGGCA 37254 36 97.2 38 ......................C............. ACCCGAACCCCTGAACCTATATGGTATTCGTTTGCATG 37180 36 94.4 36 ......................C..A.......... ACGTTCGTAGTATAGATATTTACCCCCTGTTTTGGC 37108 36 97.2 37 ......................C............. TTGTTGCATAATTACACCATACTCCTTTCTGTGATGA 37035 36 97.2 35 ......................C............. TCCACCTCCATTATCTTGGCCAAACGAGTCAATCA 36964 36 97.2 37 ......................C............. TTTAAAATGCGATAGTGATAAAAAATTGTCGAATCTG 36891 36 100.0 38 .................................... CTTTAATAACTCGTTTGTGACCACCTAGATCACCCCTC 36817 36 100.0 38 .................................... AAACCCGCAAAAAATAAGCTGTTGACGAGTCTAGTTAG 36743 36 100.0 38 .................................... AAACCCGCAAAAAATAAGCTGTTGACGAGTCTAGTTAG 36669 36 97.2 39 ......................C............. TTGTCAATCCTCGAAAATGCCGGGCGGACGGGCTTGCCA 36594 36 94.4 35 ....................A.C............. CCACCACCGACGGCGTCCACGCCAATTGCCTGCTT 36523 36 97.2 26 ......................C............. AACAATATAAACGACTACTTTACCGT Deletion [36462] 36461 36 97.2 0 ..T................................. | ========== ====== ====== ====== ==================================== ======================================== ================== 70 36 99.5 36 GTCCAAGAAAAAAGAAATGATATGAGGCATTAGCAC # Left flank : CCATCATAAGAATGACCAAGTAATGTTTGTTCACATCGGGCCAGTGAAAGATGGTCAACTATCTAAAAAAATCTCAACAATTGGGAAAGAATTTGTTCCATTGGATTTAAAGCGGCTTATATTTTGAAAAGATATAGCAAAGAAATCTTATGAAAAAAATACAAAAATATATTGTTAAAAAATAGGGAATATTATATAATGGACTTACGAGGTTCTGTCTTTTGGTCAGGACAACCGTCTAGCTATAAGTGCTGCAGGGGTGTGAGAAACTCCTATTGCTGGACGATGTCTCTTTTATTTCTTTTTTCTTGGATCTGAGTACGAGCACCCACATTGGACATTTCGCATGGTGGGTGCTCGTACTATAGGTAAAACAAACCTTTTTAAGAAGAATACAAAAATAACCACAATATTTTTTAAAAGGAATTTTGATGGATTTACATAACCTCTCGCAACATGCTTCTAAAACCCAAGCCCACCATAGCCCAAAACCCCCTGCG # Right flank : GATGGGATGGGAGAGAGAGGACAGTTCTACTCTTGCTGTATCCAGCTTCTTTTACTTTATCCGGTATCATTTCTTCACTTCTTTCTGCACATAAAAAAGCACCTAACTATTTGGATAAGTTAAGTGCTTTTATTTCCGTTTGAAGTTGTCTATTGCTTTTTTCTTCATATCTTCAAATTTTTTCTGTTTCTCAGAGTCAACTTTACCAACTGTAATCCCTTTTCTTTTTGGCATTGGGGTATCTTTCCACCTTAGTGTGTTCATAAGGCTTATATTTATCACTCATTGTATTCCTCCAACACAATTATAATTTTTCCGTCATCCTCAATCCAACCGTCAACTGTGACAAAAGACGAATCTCTCTTATATAATACTTCTACTTCATTGTCATTAAATCCTTTCAAATCTACTCCGTTTTTTGTATTTATCATTCACGCTAAAAAAAGAAGGTGCATTGTCTAGTCCTTTCATCGTAGACAAGTACCCTCTTTCATAGGCTT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCAAGAAAAAAGAAATGATATGAGGCATTAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //