Array 1 480243-479855 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPVY01000003.1 Acinetobacter baylyi strain XH447 XH447_contig_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 480242 28 100.0 32 ............................ AACGCGCATAACCGTCAATCGCTTGCTCAATA 480182 28 100.0 32 ............................ TCACTAGTACAGATGTCGGTTCCGCATTAAGT 480122 28 96.4 32 .......A.................... TAATCCAGCAGATGGTACTGCACGTATCATGA 480062 28 100.0 32 ............................ GTGATTGTTAATTTCTGGGTCAGAATAGCGAT 480002 28 100.0 32 ............................ ATTCACCGTGACACGTGTACCCGCCGTTTCTG 479942 28 100.0 32 ............................ TCTTGCTTCTTGAAGCTTATAAATCGCATCCA 479882 28 89.3 0 ........................ACT. | ========== ====== ====== ====== ============================ ================================ ================== 7 28 98.0 32 CTTAACTGCCGCACAGGCAGCTTAGAAA # Left flank : ATAACTAAAAAATGATTTGAGAATGGTTTCACCGCTTAATTTTCCACTGGCAATTGGGGTAAGTACGCCAATCGTTAAAATAATCACACCAACATTTAGGCCATGTTGCTGTAAAAAAGGGAAAAATTCACTTAAAGGTGTAAGCTTAAAAACAATTAATACGCCTGCAGCAATAGTTACCGCCGCATTTTGGCTAAAAATACCACAAGCCAGTAAAACGAGTAGAACCAGTAAATTGACATCAAATTGAGACATGAGCATGGTATGAATAGTTAGTTTTGCAGGAATGATTATTGTATAACGATTTTACCAACACTTGAAAAAGAAAGACTTTTTACAGTAAATTGAATATCTATTATACTGGCTTACCCCAAAATTTTAGACTCTTTAAAAAATCAATTTAAATCAAATGCTTATATTTTGACTTAAAAACTTTGGTTAGAAGTGAATTTGTTGATTTAAGTTTTTGATATTTCGACTATTGCTCAACAATATTTACT # Right flank : TTCAATCAATTGACTTAAAAAAATAAGTTACACTAGGATGTCTTTTTTATTCTGGATATCGATATGCTCTTGGAAAAAATGTTGCAGTCACAAGGTTTTGGTTCAAGAAAATACTGTCAGCAACTTATTAAGAACGGAGCAGTTTCGATACAAGATGAAATTCAAAAAGATCTAAAATATCGAATTCATGATTTAACTGATTTTAATTTTCAGGTTTTTGATCAAAATTACGTATATCGGGAAAAGGTATATATTATTTTAAATAAACCTAAAGGCTTTGAATGTTCTCATCAGCCACATCATCATCAAAGCGTATTCAGTTTACTGCCAGATTTATTAATTCAGCGCAATATTGCGGCTGTAGGGCGCTTGGATCAGGATACTACAGGGCTGTTGTTACTGACTGATGATGGACAATACCTACACACGCTAACGCATCCCAAGAAGCATGTTCCAAAGGTATATCATGTGGCTACGATTGATCCAATTACAGTTGATCA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTAACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTAACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 512316-513300 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPVY01000003.1 Acinetobacter baylyi strain XH447 XH447_contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 512316 28 100.0 32 ............................ TCACACTGCACTTGCGATTGGGGCACTATCAA 512376 28 100.0 32 ............................ AATGTCGTGAACACTCAGACAGGCGGATACCA 512436 28 100.0 33 ............................ CGACAGAGCAAGACATCACTGATATGTCGAATT 512497 28 100.0 32 ............................ GCAGTCGGACAACTTCAATCGAACGCATCATC 512557 28 100.0 32 ............................ CTGCTTCTCGGTCATCCTTAAATCTGAATGAG 512617 28 100.0 32 ............................ TTCCACCAATCAAGAGTGGATTGGTCAATAGT 512677 28 100.0 32 ............................ AGTCGACCGCGAGACGGGAAAAAGTACGAACA 512737 28 100.0 32 ............................ CGTAGACTGCCACCACCGCACCCCCATACATT 512797 28 100.0 32 ............................ TCGCGCAATCCATCGCGAGGGGCCTATTCGAG 512857 28 100.0 32 ............................ AATGAGAAAATCAAACCACCCATGATGATCGT 512917 28 100.0 26 ............................ TACTCGAACTTGTCTGTCATATTGCC 512971 28 100.0 32 ............................ TGAATACTCAAATGACAATAAACAGGATAAAG AC [512973] 513033 28 100.0 32 ............................ TGTGAACAAATCCGTTGTAAGCCGCGCCTTAT 513093 28 100.0 32 ............................ ATTTAAAAGCCACTCATCTGACACACCTAAAA 513153 28 100.0 33 ............................ TTATCGAAGTATTCTGCTTTGGGTGCGGCAATG 513214 28 100.0 32 ............................ ACCAGAAATGATTCCAGATATTCCAGATGAAT 513274 27 82.1 0 .C......T..............-..TC | ========== ====== ====== ====== ============================ ================================= ================== 17 28 98.9 32 CTTCACTACCGCACAGGTAGCTTAGAAA # Left flank : CCTAAATCATTAGGTGTAAATGCGATCTGCCGCTGAAGATTACTGATTTCAATCGTATCTGAGTCAATGAGGGTAATTTTGCCGACCCCAGCACGTGCAAGCAACTCAGCCGACGTACAGCCAATTCCACCCGCTCCAACAATCAAGACATTGGCAAATTTTAATTTTTCCTGAGCATCAACATCCCATCCATCTAGTAAAATTTGACGGCTATATAAATGCATTTCTGCATCGTTAAGCTCTAAATCCAGATTGTCCTGATCGTTCACTCGCGATTATCCCAATTTATGAATACTAAATTTATAACTATAATTATAAAGAGAAGCTTGTGTCGTGAGATGTTTTATTTTGACAAAAGTAAGCTTTTACCCCAATATTTTATTTACTCTTTAACAGCCAAATAAAATCAAAGACTTAGTTAAAGTCAAAATAAAATGGGTATTTCCATTTTATTTGCTTTAATGGATTGTTTATATTAATTATTTTTGCACTTTCTTACT # Right flank : CAAGTAAATTTTGATCAAACATTTAAAGCATATTAAAATAGTCACTTAAATTATCAATCAAACATTACTTTACTGATTCATATCAGTTTTTCTAACGATAGATAACAAAATTTTGAGTAAAAGAAATGACTGCATGGCAACAACTTGGGATAGAACCCACTACAAATTTAAGAGAAATTAAAAAAGCATATGCTGTAAAGCTCAAGCAAATTGATCAAGATACTCAACCAGATCAGTTTATTGCATTGAGAGAAGCCCTTCAAACTGCCCAATATGAAGCAGAATATGGACTGTTTGATCAAGAAGAGAATCAAGATTCTCTATTTAATGATGATCAGCCACTAAATTTTAATGAGCACACTGAATCCGCTCAAGAAAATGAAATCAATCAATCATCAGACACTTTACTTGAAGAAATTTATCTTGCCATTCAGCAACGTATCGTCGAGCAAGATATTCACTTCAATATTCGAGAAGCATTGCAAAAATTTGCTGATCAT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTACCGCACAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched CTTCACTACCGCACAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 588332-593759 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPVY01000003.1 Acinetobacter baylyi strain XH447 XH447_contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 588332 28 100.0 32 ............................ GACACCAAAGGTAATAAAGCTATGAAAGAATA 588392 28 100.0 32 ............................ TTTACTCTTATTATACTATTACCCCTAACCCC 588452 28 100.0 32 ............................ TCCAGCTAAAATCGTTTGAGGGTGAAACTCCT 588512 28 100.0 32 ............................ ATGATTTCGAAAGGCTCTCCGAGTACGTTATT 588572 28 100.0 32 ............................ ATTCCCAGCATTCACGCTGAGTGCTTCGGCAC 588632 28 100.0 32 ............................ TGTGCAGCCGTTTGGCGCGCCCCAGATATGCG 588692 28 100.0 32 ............................ AGGAACCGTGGCAGATTGCGTTAATATGTTAG 588752 28 100.0 32 ............................ TAACGATGGAATAACGTTCAAAGAATCTAACG 588812 28 100.0 32 ............................ AATTCATGAAAGATCATTCGCTGTGTTTGGGG 588872 28 100.0 32 ............................ ATTTGCCGCTTTGAATATTTGATGCACCTGCT 588932 28 100.0 32 ............................ AAATCGATGAGGGACAACATCAGGCACTCGAC 588992 28 100.0 32 ............................ ACAGGGCAGGGAAATAACCAAAAATCGATATA 589052 28 100.0 32 ............................ GACATAGGAACGATATGAAGATGATTTTTTTT 589112 28 100.0 32 ............................ ATCAAGCTATCGTCATTTGGCCGATACACAGC 589172 28 100.0 32 ............................ TCTGCCATGCATACAATTTGATTTGGCTGCGT 589232 28 100.0 32 ............................ AATCATCAATATCTTTTTGCGCTTTGCGTGAA 589292 28 100.0 32 ............................ TCTCACGTACAAAAAAAAATCCTATTTGATGT 589352 28 100.0 32 ............................ GCGATTGAATACCGATAGATCGGGGATATTAA 589412 28 100.0 33 ............................ ATACACTACATTGAACTGCTCGGACTTAAGCAT 589473 28 100.0 32 ............................ AAAAAAAGTGTAGCCAACTTCATACAGTTACC 589533 28 100.0 32 ............................ CAGGTGGCAGCGTTCCATTTTCGGGGGCAAAT 589593 28 100.0 32 ............................ AAAACCACATTATAAGGCTCGGTAAATGTGTA 589653 28 100.0 32 ............................ ATGAAAATAAGCCCCAATATTGTCAGTGTTCC 589713 28 100.0 32 ............................ GTTTCCGCGTCATTCGGGTACAGTTGCGACAT 589773 28 100.0 32 ............................ TTGAAACCTATGAACTTTGTGTTATACGTGTC 589833 28 100.0 32 ............................ CTTATCAAAATCGGTGGGATCTTTGTCGTACT 589893 28 100.0 32 ............................ GAATTATGCTTTAAAAAATCCTTTCGCGGGTA 589953 28 100.0 32 ............................ AATCCGATTTCTGCTGTTGCTGGGGTTAGAGC 590013 28 100.0 32 ............................ ATGTACTATAAGTCACATGGTAAAGACACGAA 590073 28 100.0 32 ............................ GAAACGTTGAATCCAGAACCAGCAATCCCAGC 590133 28 100.0 32 ............................ AAACTGTGGAGCATTACATCTACCATACTGCC 590193 28 100.0 32 ............................ TAAAACAGTCAATGTTAATTGGGGTGAACAAT 590253 28 100.0 32 ............................ GCGGTAGCTGGCGCGGTGTTTGCGTTTTTTGG 590313 28 100.0 32 ............................ TATAACTAGCATGTCAGAAATAAAACTATCCG 590373 28 100.0 32 ............................ CGTTGGTACTGTTGCAGGTGGTGCATTGGGGA 590433 28 100.0 32 ............................ GACTCCGCTACTTAAGAAAGAGAGCATAGGTG 590493 28 100.0 32 ............................ TAGAAGTAACTTACGATAACATCTTTGGCGCC 590553 28 100.0 32 ............................ TCAAGCATGTGATCACTAATGATTCGGTTTTT 590613 28 100.0 32 ............................ TATACTCCTTATATGTAATTTACGCGTAAACC 590673 28 100.0 32 ............................ CACTACATTTATACCCGCCGTTTACGCTCTTA 590733 28 100.0 32 ............................ GTTTAATGTGGCGTTCAGGTCTTGTTCGCCAA 590793 28 100.0 32 ............................ ACTCAGTTGACCAATCTTACTGCTTCACTTAA 590853 28 100.0 32 ............................ AGAAGATTTGGTGGGCAAAAATATGGAATATA 590913 28 100.0 32 ............................ ATTCTTAGCTGCATCACGCAAGATTTGCTTTT 590973 28 100.0 32 ............................ CTCATCGAAACATACATTGAGAAAAATCATTT 591033 28 100.0 32 ............................ AATCATCATCGACCGCAGTATTGAAGCGAAGC 591093 28 100.0 32 ............................ AGCCCTTCGTATATTTGAATAGTGCATTGGCT 591153 28 100.0 31 ............................ AAAAATACCCGCGCCCAAGTGATCCTGAAGA 591212 28 100.0 32 ............................ AACCATATAGAATTGTTAACTTTTGTAAATAA 591272 28 100.0 32 ............................ GATCAAAACAACAAGCGTACCAATGATGCCGA 591332 28 100.0 32 ............................ ACAAGGGATGTATTGACCAGGTGTGAGCGCAA 591392 28 100.0 32 ............................ ATTCTTGAGCCGCCTGCAGATTTGTTATGTCA 591452 28 100.0 32 ............................ ATGGTTCGGGGTTGTAGCTGTACGCCCCAGAT 591512 28 100.0 32 ............................ AAGAGCAAAAGGTAACTTGGATCTACCGCCAC 591572 28 100.0 32 ............................ CACGGAAATTGGAATGATGATTTCGACGGTAA 591632 28 100.0 32 ............................ TTGTTGAGCAGCAGAACGGCCTTTTACCAACC 591692 28 100.0 32 ............................ AGATACCTCAGTCCAAGCTGCTGAATTTTATC 591752 28 100.0 32 ............................ AAGAGACAACAGGGCTTATTAAAGTAACTTGT 591812 28 100.0 32 ............................ AAGTTTTATTTAAGCCCAAAGCTAAAGATAGT 591872 28 100.0 32 ............................ GTTAGCTGCACAAGCTCTGGGACTTTAATAAA 591932 28 100.0 32 ............................ AATCGCTAACCAGTAGAACCCGCGTAGCAGCG 591992 28 100.0 32 ............................ AAGCGTTGCGAGCGCTCAAAAAGTGGCTGATC 592052 28 100.0 32 ............................ GTCTACCAAAGCGAAAGTATCATTTTCAATGA 592112 28 100.0 32 ............................ TGTATCGGAGCTACGTCAGAAGGTCAAGCACA 592172 28 100.0 32 ............................ AGGTCGATTTATCATAAACATCGGGCACGATA 592232 28 100.0 32 ............................ GCCAGAAATTTTGACACTTGCGTTTAGCAATA 592292 28 100.0 32 ............................ AGATTGTCTCTAAATTTAACGCGTGGCTTTGT 592352 28 100.0 32 ............................ AAAGCCGAGCCCAACTTTTGACGCACAAAAAG 592412 28 100.0 32 ............................ GTCAGTGATTGCTTTCATTGCCGTAGCTACGT 592472 28 100.0 32 ............................ ATCCGCGCCCAATTTGTCCCACCAATCTTTTT 592532 28 100.0 32 ............................ GATTCCATAGAACGTACCATTGACGCGCAACA 592592 28 100.0 32 ............................ TGGATCTCTGCAGAAATCACATTGTCCAAATA 592652 28 100.0 32 ............................ AACAGGCGTTACTGAGCTATGTGTCGTTAAAA 592712 28 100.0 32 ............................ AAGCATGCCTTGATGCATACAACAAAATTGCC 592772 28 100.0 32 ............................ TGCGAGTTCAAACTTCTTTAAAGATGCAACAT 592832 28 100.0 32 ............................ CGTGGAATCATAATCATAAGCTTCACCGACAC 592892 28 100.0 32 ............................ GATCAGTGGCGCGTCTACAGTGAGCGAGTGGG 592952 28 100.0 32 ............................ ATAATTGCAACAACAGCATAATATACATACCA 593012 28 100.0 32 ............................ CTTACTTTCGCTTGCGCTTCGTTACGAATGCC 593072 28 100.0 32 ............................ TCAACCAGGATCGGATAACCATCAATTCTAAA 593132 28 100.0 32 ............................ AACAGGCGTTACTGAGCTATGTGTCGTTAAAA 593192 28 100.0 32 ............................ AAGCATGCCTTGATGCATACAACAAAATTGCC 593252 28 100.0 32 ............................ CAAATGTAATCAGGATTAGTCGATTGCAGCGT 593312 28 100.0 32 ............................ AGATCGCCTGTGCGTAGGTCAACTGCACCATT 593372 28 100.0 32 ............................ AGCTGAACACGCCGTTTTTTAACTTCCGCCAT 593432 28 100.0 32 ............................ ATGCACCTGATCCTGCCCAATGAGGGATTTAC 593492 28 96.4 32 A........................... TGATGGTGCAGGAACCACAGCAACATCAGTCA 593552 28 100.0 32 ............................ GATTGAAATACTATTAAGGCTGTTCGTAAAGC 593612 28 100.0 32 ............................ ACACACGCTGCCAATTCTTCGTTAGAGTGTAT 593672 28 100.0 32 ............................ AGCAGTAAAAGCCATGACCGTTAAGATCGCTC 593732 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 91 28 100.0 32 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAGCACTGTATAAAGAATTGGCCAAAGGATTTAATATTGACTTTAAACGAGATGAAGGCAAAAACTCACATGATAGTCTTACCGATATTGCGAATAACTACTTAGATCATGGAAATTACATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGTATGGGAATTAGTTTTGCCCTACCTATCTTGCATGGTAAAACACGCCGCGGAGGTTTAGTGTTTGATCTTGCCGACTTAGTGAAAGATGCTTTTGTGATGCCAACTGCTTTTATATGCGCATCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAACTTATAGAAATATGCCAAGACCAAGATCTTCTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCAAACAATTAACTCAAGTGATTCATAACGAAGTATTTTTACTCATTAAAAGCTTATATAATTGATATCAAGGGTTTTGTTTTGACTTAACTCTA # Right flank : ATATTAAAAGCAACATCGATAAGATCTAGCTGTCCAAACTATCAAAAGTTGATTCAAAACTAACTTTACTTCAAATTTTTTTACAGACTCTGATCTTGTACTAAACTATTCATATATGCCACCGCAGCAGTACGGTTTTCGACACAAAGCTTTTCAAAAATATGTTCTAAATGTTTATTCACCGTTCTTGGGCTTAATTCCAAAATCTCGGCAATGTCTTTATTGGTTTTACCCAGTGCAAGCCAATGCGATACTTCGGCTTCACGTTGAGTCAATTGCGGGCAGTATTTTAAAATATCTTCTATACTCAATGCTGTACTGGAAATTTTGATTTGCACCAGATAATTTTTGGTCGTGCTTAAATCATCTTGCCAAGGGGTCAAAAGAATTAACTGAAGTTGCTGTGTCGAGGTAGAGTAAGTACAGCTCATACGTTTTTTATTGTCTTTGTCTTTTTTAATGTCTGCAAACCATTGCTTTAAGCCCAACTTAAAGCCCGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //