Array 1 244453-243427 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ALSW01000023.1 Streptococcus agalactiae GB00111 ctg7180000004047, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    244452	    36	 100.0	    30	....................................	ATTTCTTTGAATACACTAGAAGATAATCTT	
    244386	    36	 100.0	    30	....................................	TAATTCATTAGGCAGTAAATTAGCAAACGT	
    244320	    36	 100.0	    30	....................................	AAACTCATACGAGATTAACGCTTTTGCTAG	
    244254	    36	 100.0	    30	....................................	ACGAGCTAACGGTTACCTAATCAGTCGCCG	
    244188	    36	 100.0	    30	....................................	TATCGATATTGATGATTTAACATCAATTAT	
    244122	    36	 100.0	    30	....................................	TTAATTAAGGTATTTATACCACCTTTTTGT	
    244056	    36	 100.0	    30	....................................	AGAGTGTGTCCAAGACCAGAGTTACTGTTT	
    243990	    36	 100.0	    30	....................................	CTATTGGTTAGAATTTTTTTACAGGAAGAA	
    243924	    36	 100.0	    30	....................................	TGCTAAAAGGTAAATTTAACATTCCAGGTA	
    243858	    36	 100.0	    30	....................................	TGTTTTAATCATCCAAAATATGTTGCTTAA	
    243792	    36	 100.0	    30	....................................	TCATCTGGTGTAACTTGTTCGGCCATCATC	
    243726	    36	 100.0	    30	....................................	TCTAAAATCAAGGAACTGAGAAAAAATAAA	
    243660	    36	 100.0	    30	....................................	TATTTGATAGCGGTAACGGGTCATATACAA	
    243594	    36	 100.0	    30	....................................	TGGTGGTATTTATAATGTACGAGCAAATCG	
    243528	    36	 100.0	    30	....................................	GATAAAAAGTGGGAGCTGAATTAAAAGGCA	
    243462	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        16	    36	 100.0	    30	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	                              	       

# Left flank :   CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATCACGATTTTAGAACTCATTAAGGCACTAGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG
# Right flank :  ATTTGAACGATTTTTATATTCCTGATATGTGTTTTAGAGCTGTGCGGTTATTATGCTAGGGCACCGTTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAGTTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTATTTTTCGGATTCAAAGAGAATGTGTCGATAGAAGAGATACGAAAGACTATAATTCCAACCTTATGGTTAAAGGGCTAGATTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTCTTTGTCACTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATGAT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.33%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-0.20,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,4.87   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//