Array 1 10380-10989 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CWNB01000050.1 Listeria monocytogenes isolate LM69, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	=============================	=====================================	==================
     10380	    29	 100.0	    35	.............................	ACAGATCAAACTCCGGAAGGGTGATTGTAAATGGC  	
     10444	    29	 100.0	    36	.............................	TGCTCTCTTTTGTGTAAAGCACATCAAGCATGTAGC 	
     10509	    29	 100.0	    35	.............................	GCGATTTTTGTCAAAGGGACAGCGATGGGTTACAA  	
     10573	    29	 100.0	    34	.............................	TTTTCTACTCCTGCTTCTAAAATGTCGTTTATAA   	
     10636	    29	 100.0	    35	.............................	CTAAAACATCCTTCACTGTATCAACTCCTTTCTAT  	
     10700	    29	  96.6	    36	A............................	AAAATAGGAGGAAATAAATTATGACTATCAAATTAA 	
     10765	    29	 100.0	    35	.............................	TTTGTTGAATCAACGGATATAGATTTTACAATTTC  	
     10829	    29	 100.0	    37	.............................	TTGGTTCCTTTGGAAAACAACAATAGCGTGTAGTATT	
     10895	    29	  75.9	    36	......T.C.A.C...CA...T.......	GCAGAAGCAGCAAAATAACCAAAAGTAATGACTTTC 	G [10918]
     10961	    29	  79.3	     0	......A..T....AGA......A.....	|                                    	
==========	======	======	======	=============================	=====================================	==================
        10	    29	  95.2	    36	GTTTTAGTTACTTATTGTGAAATGTAAAT	                                     	       

# Left flank :   GCGTCCGTGCCACCACTTCAGCTGATATTTTACTTGAAAAAGGTGCCGTAGAAGTTATCGCTTGCGCAACCCACTCCGTTATGGCTGGAAACGCAACCGAACGCTTACAAAACTCCAATATCAAAGAAGTCATCACATCCGACTCCATCGATCTTCCAGAAGACAAGCAATTCGACAAACTAACAACCATCTCCATCGGACGAATCTTAGGCCGCGCAATCGAAGGCGTACAAGAAAACCGCTCGTTGCATCCGTTGTTTTAAAGAATAAGCAGAAAACAGTAACTTAGTAGAGTTGCTGTTTTTTTGTTATCTGTCGACCTCGAGTAGCGTGAAAAATACCGGGGATCGACAGAAAGTTGTAAGTGGTTGGGGTGGAAGAAGTTTGGCGGTATTTGCTTGGGGAAATCTTCCGGATAAGAGGAGATTTTAGATGTTTTTTTGTAGGTCGACAGAAATAGCTCTTTGAGGTAAGATGGGAGTAAGAAGAAAAGTTAGTGG
# Right flank :  TGAAAACCTGTTATACATAGGATTATCTATTTCCGTTATAATTATTCCTTGCAAATAAATTCCAAAAAACAAACCCCTCATTAATTGGGTTTGTTTTTTTGTGAATAATTATAGTCAAACGAGCAATCTGTTAACAATTTAGCAATAAACGCAATAAAAAGCCGTTTTTTCACTATGGATTGTACTATAAAACATAATCTACCTATGCTAAAATTTAAGGGAAGGTAAGCTGAATAATACATATAAGGAGGACTCTACTATTGAAAAAGATTCTAGTGCCCATATTATTGTTAGCAACAATCTTAGCAAGCTGTTCCTCGCCGAATGAAAAAATAACCAAAGACACTAAAATATCCAAGACTAATACAATAAGAGCAGATTACAAAGTTCCAAAAGATATTAAAGAACTTGAGGATGATAGTGCTAATATTGTTAAAGTAAAATTTCTTCAAAATAAAACGATAGGCAAGGATGGTAGTACTATCAGCGAGATAGAAATT

# Questionable array : NO	 Score: 6.02
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTTACTTATTGTGAAATGTAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:79.31%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGTTACTTATTGTGAAATGTAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-1.20,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-15] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [60.0-75.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.27   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
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