Array 1 2526280-2528710 **** Predicted by CRISPRDetect 2.4 *** >NZ_SCEM01000001.1 Lacticaseibacillus paracasei strain SRCM103410 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 2526280 32 100.0 35 ................................ TTGTAAGACTTGCGTTACACCGGCCAAATTCCTTT 2526347 32 100.0 33 ................................ ATTACGTTAACAGAATGGAATGACAAGTCACGT 2526412 32 100.0 35 ................................ ACTTTGTCCACTTGGTTGTGAGCTTGTCGTTCCCT 2526479 32 100.0 34 ................................ ACGGACGCGTTTGAAAGCCGAGAATACGATCACA 2526545 32 100.0 34 ................................ CCATGTGGTATCACTGTAGCTTAACTTGTATATG 2526611 32 100.0 34 ................................ ATTAATGAACTCCTCCTTATAAATATTTTTCGAT 2526677 32 100.0 34 ................................ TTGTTTAATCGCCGGATAAGTGCTTTATCTTTTG 2526743 32 100.0 35 ................................ CGCGCGTGGATATGTGCTCTCAATCTCATCTTTTG 2526810 32 100.0 36 ................................ CTTTGGCCATGTTCTGAACAGACTTGACGATGCCAT 2526878 32 100.0 37 ................................ AATCTGGACGGGGGCTAAAATATTAGCAAATGATCCA 2526947 32 100.0 34 ................................ CCAGTCGATTGTTGCTTTGTGCACATCTTTTAAC 2527013 32 100.0 34 ................................ AACGTCACGGGCGCAACAGGTTTCGATTCTGTAC 2527079 32 100.0 35 ................................ ACGAATATTTGCAAACTCTTTGCTCGGTGGAAGTT 2527146 32 100.0 33 ................................ CGAGACCATCAACGACAAACAAAAACCCCACAA 2527211 32 100.0 34 ................................ TTGTCCCCGTAGAACGTCAGGCCATGGCCGCTGT 2527277 32 100.0 34 ................................ TCTAATTTGATATTGTCAATACAGATCCATCCAC 2527343 32 100.0 33 ................................ AAGCCGCCTTGTACAAGGTCTCGGGTATGAAAA 2527408 32 100.0 34 ................................ TCGTTGGCCGTCGCTTCGGAAAGTTTAACAAGCT 2527474 32 100.0 37 ................................ AAGATGTCATGGATAACATTTGGCAGTCTTCGCCAAC 2527543 32 100.0 34 ................................ CATGCACGGCTGGCTACAATCTAATGGGTTCCAA 2527609 32 100.0 36 ................................ TTGCAAATGACGTTGTTCTTGATTGACTTCTTCACT 2527677 32 100.0 36 ................................ TTATGAAGAAGTTACTAAGGCTATGCGACAAGCTGC 2527745 32 100.0 36 ................................ CACTATCAGTCGTATGTGACTCCATATCCGTTTCTG 2527813 32 100.0 33 ................................ AATCCACGCTTGAATATTTTGATCGCTGTCATT 2527878 32 100.0 33 ................................ CGTTTACGCAAGTCTTCAAGTGCTCGCGAACAG 2527943 32 100.0 36 ................................ AAAACGCAAAGAACCCGAAGCGGTCAGTGAAGACCG 2528011 32 100.0 35 ................................ TCCTTTGCCACGGTGTAGCCGTTGACGTAAGCCTT 2528078 32 100.0 35 ................................ TATTTTGTTTGACGGGGACACCCTATGAACGGCTA 2528145 32 100.0 36 ................................ CTCAACGCGCCAGACACCTAGCAGCCATGCACGGGC 2528213 32 100.0 35 ................................ AACTAATAGATCCATATACTACCCTCCAATCGGCC 2528280 32 96.9 33 ................A............... AGCTCTGGAGACGTCACTCAGTCAATTGATGCA 2528345 32 100.0 34 ................................ ACCAAGGAGGACTAACACATGGAAATTAAACTAG 2528411 32 100.0 34 ................................ AGAGTTCTTATCAATGTAAAAAGCGTAGATGCGG 2528477 32 100.0 36 ................................ CCAGAGCCGCGCCGTTATCGCGCACTGCTAGGTAGT 2528545 32 100.0 36 ................................ ACTAGGCTTATCAATATAATTAATAGCCAAGCCATC 2528613 32 100.0 34 ................................ ACTAGGCTTATTAATGAACTGAATAGCCCAGCCA 2528679 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 37 32 99.9 35 GTCGCACCTCACGTAGGTGCGTGAATTGAAAT # Left flank : GAAAAATTTAAACCTATCGATTCAAAAACTGTTCCAGTTTTAGTCCAGTGGCCTGAATGTCCTGAAAGTGGTCAACTAGTTGCAGAGGTTGAGGCTAGAAAGGACGACTTCGATCAGATTTCTGCACTAATGAAAAAGGCACAACAATTTGTAGTTCAAGTTTATATGGACGGTAGTCAGAAAACTTTGACTATGGGCAATGTCGTTGCCGACTATATTCCTGAGTTTGGATTGTGGATTGCTCGTGAGGGCTCATATAACGATGAGTTTGGTTTGGATCCAGATGGTGGCTCTAAGTTGGGCTTGAATATGTTATAGGGTAATATATAGTCGGGTGCGAATGTGTAGTTATCATCAAAACGTGGGAGACTCGCACCTTTATTTGGTAATTTAGTGTCCATTTATAATGGATTATGTTCTGATTTGCCTACAGGTATTAGTAAATGCCTTTATTAATTCTGCATGTAGTAGCGTTAGCCGCATTTTTACTATATTTTGCG # Right flank : TTGACCACTAGCGATAGTGGATTGAAGTCAATATTTGAGACAGGTTTTAAGAGACATTCAGAACCGCGTTTACCTTCCACAGCTAAAATAAATCATTAATCGTGATTAATAACTTATTTGAACCATGGAAAGCATTAAATCAGGCGGCCATTTGGCTCGTAAGTGTTACAATTTCAACTTGTAAGGGGGTCTGGTAGCCCAGTGAACTATGAATTCTCTTCCTATTGTAGAAAGCATGCACATATTCAAAAAGGACGGCAGAGGCAGTTTCATAATCTTCAAAGACCGGCACTGGATAAACACATTCCTTTTTGAGGGAAGCGTGAAAGGATTCCATTGGCGCATTATCATACGGACAACCCTTACGGCTGTATGAGTGGCGGATATGTAGCTCAGTTAAACGTTGATTGTAATCATCGCTGGTATACTGTGATCCTAAATCCGTATGGATAATCAGGTCCCCAGTAATGGTTCGATTTTTAACCGCGCTTTCAAGGGTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCACGTAGGTGCGTGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTTACGTAGGTGCGTGGATTTAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.80,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //