Array 1 2466687-2468240 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP015418.1 Rhodovulum sulfidophilum DSM 1374 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2466687 29 100.0 32 ............................. GCGATGCAAAAAATGGGGGTCGTCACAAAAGA 2466748 29 100.0 32 ............................. GGGGGTGGCGAGAGGGCGCCGCCGGGCATAGA 2466809 29 100.0 32 ............................. CTGGTGAGCGTCAACCTGGACAGCCTGACATA 2466870 29 100.0 32 ............................. CGCCGACCCCCGGTCGCGTCTGCCAGGTATTC 2466931 29 100.0 32 ............................. TTGTTACGCCAGAGCGCCGTCCCGTAATCTGC 2466992 29 100.0 32 ............................. TGCGATCTGGTGGCGCGGGGTCTGCCGCCACT 2467053 29 100.0 32 ............................. GGGAAAGTCAGGCTCCGCGTTCACAATGGCGC 2467114 29 100.0 32 ............................. CGCTCAGCAAACATGCGCAGGCTGTCGATGCC 2467175 29 100.0 32 ............................. CCTATGTGGTCTTCTCTGATCCAAGAAATTGC 2467236 29 100.0 32 ............................. GGGGGTTACACAGGCGGGGTTACTCTGGACGG 2467297 29 100.0 32 ............................. ATGAAAGCTTGATCTTATGGCCGCTGCAATTG 2467358 29 100.0 32 ............................. ACCGATTGCTCTGCGGCCGGGGGCGTTCTTTC 2467419 29 100.0 32 ............................. AGCCCCATCCACGCCCGCAGTCTGCAATCCGG 2467480 29 100.0 32 ............................. GCATTGGAAAGGCGGGGGAATAGATATGCCCC 2467541 29 100.0 32 ............................. GCGCTGCCGCCCTCCATCCAAGCCCGGCTCAT 2467602 29 100.0 32 ............................. ATCTGCCACCCGAGAGCGGCTAGTGCGTGCGC 2467663 29 100.0 32 ............................. TACCCGGTCACCAACATGCCGAAGGTGGGCGA 2467724 29 100.0 31 ............................. ATGAAAAGGACGCGAAAAAATGGCAAATAGC 2467785 29 100.0 32 ............................. GGGCGGCAGGCGGTCGAGGCCCGGATGCGCGC 2467846 29 100.0 32 ............................. ACACCCTGGCACGCGCAGGACGGGTGGGAATA 2467907 29 100.0 32 ............................. CACCATGGCGACCTGAGCGCGGCCGAGGTCAA 2467968 29 100.0 32 ............................. GGCAGCCGCGATCCGGAGGCGTGGATCTCCGA 2468029 29 100.0 32 ............................. CCCCTTGCCCGTAGGCTGGGGACCATGGTCGG 2468090 29 96.6 32 .........................G... CCGGAAGACCACATCAGTGTCTGGCTCACCAC 2468151 29 100.0 32 ............................. CGGATGCGCCGGGCGCAGGGAAAGGAGTGAGG 2468212 29 96.6 0 ..........................T.. | ========== ====== ====== ====== ============================= ================================ ================== 26 29 99.7 32 CTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CTGGCCTGCTAAAGAGGATCATTCCTGCCATCGAGGAGGTTCTCTCGGCCGGAAACCTTCCTCGTCCCGAGCCGCCGCCCGAGGCCGTTTCTCCCGCTTTTCCCGATGCGCCGCCGACGGGCGATGCCGGTCACCGATAGTCTATGTTGGTTGTTGTCGTCTCCAACGCCCCACCGCGCCTCCGGGGCAGGCTGTCTGCCTGGTTGGTCGAGGTGCGCGCAGGGGTTTATGTCGGCGACTATTCGGCCCGGACGCGCGAGATGATCTGGGAACAGGTTCTGGCCGGGCTTGATAAGGGGGATGCCGTCATGGTTTGGAAGGCACCGACCGATCAGGGCTACGACTTTGTGACGGCAGGTCAGAACCGCAGGATGCCGGTGGATTTCGACGGATTGAAATTGGTCAGTTTCTTCCCCGAGCCACCAAGCCGATAGGCGGAAGAGGACGGTAGGTTCTTTGACATCGTGAAAAATTTTTTAGATCAACGGTTTGCAGTAAGA # Right flank : GGAGGAGTCGGCCGCACTCTGATAGAAAGTTCCCGTTCTCTGCGCGCCTGGGAGTGAAGCGAGAGCTTGCTAATCATTCCGAATGACTTCCGGTTGTGGTGTACAAAAGCGTCGCGTGGCCGTGCGTCAGCGCTCAACAGATTAACTCCCTCTGACCGCTTCGCCGATCCGCCGCGCGATCTCGCCGGGCGAGGGGGCGATCCATCCGATCAGGGCGACCAGCACGATCCAGGGCGGGATGACATTGACGATGACGGTCTCGACGCGGTCGGCGCGGAGGCGGTTCTCGGACTGCTCCTGGCGGATCTCGCGGGCGCGCGGCCGAACGATGCTGGGCGCGTTCTCGACCTTCTGGCCCTGCACGTTTTCGGCCCCGGCCTGGACATTCGCGGCGAGGTTGGGGCCAAGCGGCGCGGGCAGCCCGCCGCATCCGGCCAGCAGCAGCGCCGCGAGGAGCGCCCTCATGCGCCGTCCCAGCGGAACGGGACATTGGCCGGAAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //