Array 1 112056-112988 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP019196.1 Aeromonas caviae strain GSH8M-1 plasmid pGSH8M-1-1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ====================================== ================== 112056 24 95.8 37 .......................T CATCATGAACGTACTGAAACTGACCGCCGCCGATCGC 112117 24 100.0 38 ........................ GCGTGTAAAGCGTCCAACGTGACTTACAGAAAATCGCC 112179 24 100.0 37 ........................ CTGCGGCGGGTTTCCCTGCCGATTCGCCCCTGATCGC 112240 24 100.0 36 ........................ GCTGGCACCAGTAGAGCCTGGAGTGCAACGCATCGC 112300 24 100.0 36 ........................ AGATTGGCGAAGTCTGCATTGGTAATCCGCTGATCG 112360 24 100.0 36 ........................ AGCTTTATGAGCTGAAACAGCTGGTGATCCAGCTCG 112420 24 95.8 36 ...........C............ AACGAGGCTACGGGCAATGTAGCCAGAAAAAAATCG 112480 24 95.8 36 .......................T CGCTTCCCACCAATGGCTATCCAGCACATTCGATCG 112540 24 100.0 37 ........................ CGCCCAGTTTTTACATACCGATGTAATGTTGGAGCTA 112601 24 79.2 35 T......A.CC............C CGCAAGGGGAGCTGTTGCTATAGCGGGAATGAATC 112660 24 95.8 37 ...........C............ CGTCAGCACATCACACAGCTATTGAGCACCAGATCGA A [112664] 112722 24 91.7 36 T..........C............ TTTTCGATGATGTCGGTGGCGTTTGCCATCATATCG 112782 24 95.8 37 ...........C............ CCCGCGGGATAGAGAAGTGGTGCCATCAGCGCATCTC 112843 23 87.5 36 T......-..C............. TGCCCTTTTTGTGCACAAACAAAAAAATCAAAATCC C [112852] 112903 23 75.0 37 AT....-.T.T............A AGCGGGACGTCGTGGTGCTGTGCTGCGGCTGCATCTC AC [112914] 112965 24 87.5 0 .....A.....C...........T | ========== ====== ====== ====== ======================== ====================================== ================== 16 24 93.7 36 CCCCCCGCAGGTGGGGGTTAACGG # Left flank : TAAAGAACGCATCGCCTATGTGCCTGACGGGGCATGGCAGCGGCTTATGCGGTGGGTGGAGGAGGTTCGTGGTGATCAGCCAGGATCGCTGTTTCAGCGGATCAGGCGGTTTGATGATGTCACCGCCGACAGAATGACTGACCAGGCTATCTATCACATTCTTGAAACGAGAAGGATTGAGGCGGGGCTGGAAAAATTCGCTCCTCATGATCTCCGCAGAACCTTTGCATCGGCCATGCTGGATAATGGCGAGGACATCATCACGGTCAAGGATGCGATGGGCCATGCCAGTGTCACGACCACGCAGAAGTATGATCGTCGGGGAGATGAGCGATTGAAACAGGCCAGTCGGCGACTCGATTTTTGAGTCGGAAGACCAATGTTAATCAGTTGCGCACTCAGAATTTAAGAGGTAAATTTCAGCCACCAATCCTCAAGTGTGCGAACATCGCTGAACGTGACCTAATCTTGATGGTAATTGTTGACTTGGTAAGTATCGC # Right flank : TTAGCTTCACACCAGGCCTTGATAGCATCGCCGATCTATCCCTCGCGACTGGGGGTTATCGGGAGGAAGCATGGCACAACAGAACGTTTTCCTTCTTCGATTGAGGGTTATGCGCGAAATGGCCGCCGACACCGACTCGGTGATCTCTGCCGTCACGGCCGAGCTGCCAGTCGGTTTCCCTGAGCACATTAGCAAGGCCATTTTTTCTGGGTTGTCGGCTCAAGCAGCCAAGCTTCTGAGAGGGTGAGAAATGGCTGAAATGAGCAATTTTGGGGAAAGCTTCAAGCTTTATTCCGACGGGCAACGAGATCCTGTCAAGCGCACAGGCCTGAACGTCCAGTACACAGAGACTCGGGCCAACTACCCGACAATCAGCATCGAGATCGCTCCCATCCGGGCGGCAGGAGCAAAAGCAGACTGGGAGCAGAAGATCACAGTACAACTGACCAGGGCAGAGCTGACCGCGTTCTGCGGTGTGATGTTTGGGCTCAGGAAGGATG # Questionable array : NO Score: 2.53 # Score Detail : 1:0, 2:0, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.58, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCCCCGCAGGTGGGGGTTAACGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-25] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //