Array 1 154527-153749 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUNN01000004.1 Bullifex porci strain NM-380-WT-3C1 seq4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 154526 36 100.0 35 .................................... CAGATAATACTCTGAGACTTCCGCTTCGTAACCAT 154455 36 91.7 40 ...........T...............A.......A AGTGGTGCAGTTACATCAATCTGTACATGAATCATTCTCA 154379 36 100.0 37 .................................... TCATTTGAAACGTCTCAGATAGAAATATCTCCATTAA 154306 36 88.9 40 .....C....AT....................T... GCTCGTAGTACAAGAAGAACTTCTCTGCGTCTACTTTGTA 154230 36 100.0 36 .................................... AGTTTCCCGAGAAAGTCTTCATACTTTAAAATCATT 154158 36 100.0 41 .................................... AATTTTTCAAAGGCTATCTCTAATACTTTCTTGAACATATT 154081 36 100.0 38 .................................... TGTGTGTCGAATCTTACTAGATTTGTACCGGCATTGTC 154007 36 94.4 41 ...........T.......G................ CAATGTAATTGCATCTTTTTTACTCCAATTTCAGTATACAA 153930 36 91.7 36 .......T...T.......G................ AGTTTCCCGAGAAAGTCTTCATACTTTAAAATCATT 153858 36 100.0 38 .................................... TTCATTGGCTTGTTCTTACCAACTGTCCATCCACACTG 153784 36 86.1 0 ...........AC...................TT.A | ========== ====== ====== ====== ==================================== ========================================= ================== 11 36 95.7 38 GTTATTAATAGCTGACCTGTATAAAGGGATTTAGAC # Left flank : TTATTTTAATATGAGGGCTTATGGAAAAAAGATATATTGTAAATTTATGATTTATCTTCTAAAATTGGTAGCAGAAAAATACCTCAAATACTAAAACGTTTCCAAATAGAAGAATTCAAAAATCTGTAATTGAGGTAGTTGTAAATGAAGTAGAAGAAAGTAAATTAGTTAATAAATGCTTTAAGTTTATCGATGATAAAATAGATAAACTTTTAATAATACCAATCGGAGAAGAACAAGTAAAAAGATCCATACATGTTGGATTTAAATATATTTCAATAAGCAAAACTGGTCCTTTTCAAATAATATAGTGCTAAACTATTACTCCCTTATTTTTCCCAATAATAAACTCTGATTGGCACTTTATTCTAATTCATTAACTGATAATTAAATATATGAACCAAATAATATGGGATTATTAAAATTTTAGGTTAATCTTTATCACGTCTGCACTTTCAATATAATAATTAGTTTTGACGAAAGGAAAAGTAAATGGTAGA # Right flank : ATATTAATAATCTCTATATGGTATATTTATAAGAAAAAGAGAGATAATATGGCATACTCTGAGAGTATTAGAGACTTAGAAAGACTTAGAGAAATAATTCTAAATTTCTATGTCGATGGTAGTAAAACTAAAGATGAATATCTTGCTTCTTTTTATAGAGGAGCAAGTATAATAATTGAGAATGCGTTATGTGAGAATATTCAAATTATTAGGAAAGCAGGAAAAACTAGGAAGTTTATATCTGTTGATGCAAGAAAGCATCAAAATAATCCATTACATAAAATTTTTTTTATAAAAAGTTATAGTAGTAATGATATTAGTTTTTATTTTCACATAATTGATATACTTCATGATAATAAGACAAAGAAAATATCTGAAATAACAGAAGAATTAAGACAAAGATATTACAATTTCTATGAGGATTCTGATGGTAATATAACTCAAAAAAAATATTTCCCAGATACAGTAAGAAATAAACTTGAAGAGCTTGTGTCTTTAGG # Questionable array : NO Score: 3.05 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATTAATAGCTGACCTGTATAAAGGGATTTAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.10,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //