Array 1 3295611-3294491 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFEKP010000001.1 Parabacteroides distasonis strain FDAARGOS_1233 ctg.s1.000000F_arrow_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 3295610 47 91.5 30 A......C.......................GA.............. TTCTCTGCGTTTTGGTTCAATGCGATTGCA 3295533 47 100.0 29 ............................................... CATAGTATAGTGATCAAAAACATCAAACG 3295457 47 100.0 30 ............................................... AGGTAACGGGCAGACCAACCATCTGCCCAC 3295380 47 100.0 30 ............................................... GGTGACGGCAACTACACCATCCGGACTCAA 3295303 47 100.0 29 ............................................... ATCCCCTTTAACTCCATATCCGCCTATTC 3295227 47 100.0 30 ............................................... ACATTTTATCTTCCAAAGAACTTATCTATC 3295150 47 100.0 29 ............................................... ATCAGCTCTCTCGTCCGTGAGGATGGGGG 3295074 47 100.0 30 ............................................... ATACATGTGTATATACACCAATATACCCCG 3294997 47 100.0 29 ............................................... ATACCCGAGAAGTGATTCACTGGTATGGA 3294921 47 100.0 30 ............................................... CTCCGGTTTATTCTTCTTAGACATATACTA 3294844 47 100.0 30 ............................................... ACGACGCATTCTCGTCCTTTATCTTGCCTA 3294767 47 100.0 30 ............................................... GCAAAGAAATACTCCCACGAGTAAACGACG 3294690 47 100.0 29 ............................................... TGCTATATCCTCTATTTCGCTTATTTTGA 3294614 47 100.0 30 ............................................... TTTTTCAACTCGCAGATCGTTTGCCGTTCC 3294537 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 15 47 99.4 30 GTTGTGATTTGCTTTCATTTTAGTAACTTTGAGCCATTGGAAACAGC # Left flank : ATCCCCGAAACATTTCCCTTTTTCGGTCAAAATCCCTATATTTGCATCAGTTCCAAGAGCAGAGCGAAGCAATGCAGCGAAACCCGCACAGCTACCAAATCGCTACCGGCTACCGAACTTTCTACTCTTTAAGTCTTATCTACCAACCGATTACAAAAAAACGATTGTTTTTACAGGAAAACAATAAGCTTTTCATCCGAAAACAATCGGATTTCCGGTCGGAAACAATAAGGATCGCAGTCGAAAACAGCATACAACGCCGTTATAAACACCTTACTATTGGATCATAATCCCTCTACAAAGCCTATTCATACACTAAAAAATGGCGAAATACGCTGTTTCCGCCTTCCTTTTCTCTCTATTTTCGCATTTCCATAAAAAGCCTTTATCAGCTAAAAGTCTCCATTTTGAGCAAAATGACAGAAAAAGAGATATTTTGATGACATAAAAGAGAATGGCTTACTTTTTGGTGTAGCTGCCCCAATATTTTGCAATATTTT # Right flank : ATATTATCTATTAAAAACTATTAATCAATGGATTACAAAGCACATCAGAATAAAAAAAACAGATATTGTTTCCATTAAAAATCCCGCTTGACAGCGGGATTTTTCTTTTAGAACAACTCCAATTGCTGTCCAGGAGTATTCACTTCCACCGTTTTCTTTCCATAAAAAAGTTCAATATTCCCAAACTGCTTATCCGTAATACACATGATTCCGACATTCCCATGCTCCGGAAGAAAAGATTTAACTCTTTTTACATGTACGGCCGCATTCTCGCTACTAGCACAATGGCGGACATAAATAGAAAACTGAAACATCGTAAATCCATCTCTTTGTAGATTTTTCCTGAAATCCACATACGCCTTTTTCTCCTTCTTCGTCTCGGTAGGCAAATCAAACAACACAAGTACCCACATAACACGATATTCGCTAAACCGATCCATATTACATTTCCGGATAGGAGATTCTACGCAATTCGCCACTAAAGCACTTATACAGAGAAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTAACTTTGAGCCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //