Array 1 855813-849694 **** Predicted by CRISPRDetect 2.4 *** >NZ_AHJR01000001.1 Sulfolobus islandicus M.16.43 chromosome, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================================= ================== 855812 24 100.0 42 ........................ TTTAACTCACTTTACTTAGGTACTCCCCTTGCCTTAAACTGT 855746 24 100.0 39 ........................ GCGTTGTGGGCGATGGTTTGTATTTTACGAATATAAACC 855683 24 100.0 40 ........................ TTAGACCGTAGTAATTCGCAATATTCTTCGCAAATGTAGA 855619 24 100.0 40 ........................ ATCGCATATCGATTTAAATTTCCAGTACCATACGCAACTG 855555 24 100.0 38 ........................ ACGCCACCGCTTCTAACTAGCGGAACTTTCGGGCAAAG 855493 24 100.0 40 ........................ ACCTCAGTCTATGAACCGACTAGCATCAACGAAACTAGCG 855429 24 100.0 38 ........................ GTACTTTCATCTCTTTGTCGTAATACTAAATGATACAT 855367 24 100.0 38 ........................ TTAGCACGTAAACGTCCTATTGATGTTGTTATCTCTTT 855305 24 100.0 41 ........................ AATTCGTTAGAAAACGGGTTTTCACAAGCACTTGAAGCGTT 855240 24 100.0 40 ........................ GTCTCCATTAAATATCTTAAAATGAATGGCGGTAATGGTC 855176 24 100.0 41 ........................ TCTAACTCATTTACATTTATGGGCATTTTTTCACCCTTATT 855111 24 100.0 39 ........................ TCCTGCGATTAATGCAACAACTACAAATACTATTACTAA 855048 24 100.0 40 ........................ CCTAGTTTCAATTAACTACTCAGCTATTCACACTCTGACT 854984 24 100.0 40 ........................ GCATCTGTTATTAGTATTATAGTCTTTATTCTTCTCAAGT 854920 24 100.0 38 ........................ TGATTTCCGCTTTTGCTTAGGTGTAATCGGCTTTTAAT 854858 24 100.0 40 ........................ CTAATCAGTTCAACCCCACAGAGTCCATCCCCGACTCTGC 854794 24 100.0 38 ........................ TTTGTGGCACCCAAGATTATAGTCGCCGAGGTGGTATT 854732 24 100.0 42 ........................ CAAGATATTGACTTAGAGTATGCTAAAGCCATTGAGATATGT 854666 24 100.0 40 ........................ TTTTCGTACAAAGTAATACTAGACGGCGTATTATAAGACC 854602 24 100.0 40 ........................ TATCTATTCCCCGAACTTTCCGAGATCGAGGAAGCGATTT 854538 24 100.0 39 ........................ GTGGCTGCAGCACCTGCTGCAGGTGCCGTTCCAGTGCCG 854475 24 100.0 39 ........................ AAATAAGTGGTAAAAGATGGCGGCAAATCAAGAAGTATG 854412 24 100.0 40 ........................ AATGCAGCAAAAGAACTCATATAATATACAGTAGAACTAT 854348 24 100.0 38 ........................ AACAAATAGCGAAAATTTGTTATAGAAAGGTGGAAGGA 854286 24 100.0 41 ........................ AAATTCTTTGTACATAGTGATGCAGACATTAAGGTAGCAAT 854221 24 100.0 39 ........................ TAAAAGTGTTGATTAAGCCTTATGTATGTATTATTGCAA 854158 24 100.0 39 ........................ ACCCTAAGATAAAAAAGTAGAAGTGAAAAAGCTAGGAGA 854095 24 100.0 39 ........................ ATGCAGTAATTATGAGGTTAGTTTCGAAAGGTGTTTTTA 854032 24 100.0 40 ........................ GAGGAATAGCCTAATTCAACATGAGGCATAGGAGGCACAA 853968 24 100.0 41 ........................ GAACCATAGGCAACCGCTTGTCTATTATTCTTTAGCTTCAT 853903 24 100.0 40 ........................ TATATAATAAGCATAGCTCTTCGTCACTCAGATATTTATA 853839 24 100.0 38 ........................ TTTTTGATTCACTTTTCAAATAGTGATAAGTGAAATCT 853777 24 100.0 38 ........................ GTTTATTTTATTAATTCTTCTCTTCCCTTTAACCTATA 853715 24 100.0 38 ........................ TTTCCGCAACGCAAAGCTTCATTCCTAGTAATTGTGAG 853653 24 100.0 41 ........................ ATTCCCTTTGCTCTTAATCTTCCAACAGATGCCGTTATTTC 853588 24 100.0 40 ........................ GAAGTCTTTCCCCATCACCATTATGTCACCTATTCCAACT 853524 24 100.0 42 ........................ AATGATAAAGTTATAACAATCCTAGGATATCCATGCTATAGT 853458 24 100.0 38 ........................ TCAGCCATGCCAACAAGAGATGTCAGTCCACCACTTTG 853396 24 100.0 40 ........................ ACTAGAATTCCCATTATAAAAGCAATCAAAAAGAATGAAA 853332 24 100.0 36 ........................ CTGTAAACACTAATTCTTTTACGTACTACGTTATGT 853272 24 100.0 40 ........................ CTATCAGTTTCATCTATTATAATTGCTGGTAATGCAAAAC 853208 24 100.0 38 ........................ TACATGGGCGGAAACCCATATGGATTCGGCTTAGCCCA 853146 24 100.0 40 ........................ CTATTTCGTGGTCTCAGACATCGAGTTACAACAATATTAT 853082 24 100.0 44 ........................ TAAAAGGGTTAATGACAAACTGGAAAGCTACCGTGCTCAATTTC 853014 24 100.0 39 ........................ GGTTTTCGTCATCCCGTTAGTCATTGTCGGGAAGCTCGT 852951 24 100.0 41 ........................ AGTATTATTGTTACATTACTCTTAAAGTTGATATACGTCTT 852886 24 100.0 38 ........................ TATTAATAAGTTTCCGCACTGGAAAAGTGATATCAAAC 852824 24 100.0 39 ........................ AAACATTCATGCAGTAGATGGCAAAGAAGTAAAACAACT 852761 24 100.0 39 ........................ TGTACTGTATGCAGCTTACCTGTTCCGACATGGGATAAA 852698 24 100.0 40 ........................ CAATCAATCGTAAACGCTAAATCAAACTCCTAACTTTATC 852634 24 100.0 32 ........................ CCCTCGCCTCCTTCTTTTCCTTTTTAAGTTGT 852578 24 100.0 39 ........................ GCTGCTTGTAACATTCTTAATAAATTTATATTTGTTATC 852515 24 100.0 38 ........................ TTTTCTATCAGTCCACCGCAAGGAGTTACTAGAACAAT 852453 24 100.0 37 ........................ TTATTGTTGATGCTAGAAGTGTAAATGTTGAAGGTAA 852392 24 100.0 40 ........................ ATAAACTTCGGTTATAGTTTTACTGGTATAGATGGGTTAT 852328 24 100.0 39 ........................ TAATCTCTGCAGGCAATTACCAAAAAGTGGTAATAGACG 852265 24 100.0 36 ........................ GCAGGTTGGTACTATGAATTCACTGGTTCTAACGTT 852205 24 100.0 39 ........................ ACGTATGATTTGCCGGTTTTCTCTATCAATTCCATTCAA 852142 24 100.0 40 ........................ TTAACACTTAAACTTGAGTTATCATCATCAATAGATAAAA 852078 24 100.0 39 ........................ ACTCAATTATATCAATCACTACAATATGTAATTTATTTT 852015 24 100.0 44 ........................ AATTCTCTTAATTCTACTATGACCTCATATTTTTTCTTCATCGT 851947 24 100.0 41 ........................ TTATACTCAAACGGTTGCGTACCCCAAGGACGTAATTCTAC 851882 24 100.0 39 ........................ TACAATTAATGCAACAACTATAAATACTATTACTAAGGG 851819 24 100.0 39 ........................ TTCTTATTGTATTTCATGATGCCTTGGTTTGCAATATCT 851756 24 100.0 38 ........................ TCACTCTTTCCTCCTTTTTCATTTTGTTCTGTGCCCAA 851694 24 100.0 39 ........................ GATATCTTAACAATCCGACAGCTTTAGGTGCTCTAAGAT 851631 24 100.0 39 ........................ TACAACAAGGCAATTATCAGACCGCATTACAATATCTAA 851568 24 100.0 42 ........................ TATCCTTATCAAGAGGAGGTTATCAACAAGATTCGTAACGCT 851502 24 100.0 37 ........................ GATACAATTGCGTTAGCTAACGCTTCTAAACCGCTAG 851441 24 100.0 40 ........................ CCCGTCGCCAACGTTCCGTTGAACGCTTGCCAATTTGCCA 851377 24 100.0 39 ........................ TTTTGTTTTCCCCATTTTTCACTATCTTCGTTGTTCCTT 851314 24 100.0 37 ........................ ACGCTTAATGAACTCAAAGCGAAAACGGGAAAACGAT 851253 24 100.0 38 ........................ ACCGACCATCAGTTTTAACATTAACCCAAATCAGGGCA 851191 24 100.0 39 ........................ AAACTGCGGTGAACAATTGGGTTCAGAGAACACAAAGTG 851128 24 100.0 41 ........................ CCGCATAAGCAAATCTTGCTACTACCATCCCGCCTGCCCCA 851063 24 100.0 39 ........................ TAAAAATTCCCGCTAACATATATATTAGATGTTTAAAGT 851000 24 100.0 41 ........................ CAAAACAAGGTGATACATGCAACTTACATGTATTATATCTA 850935 24 100.0 39 ........................ TCGGCTATGATTACACCGAAATAACCGTCGTCATTAAGT 850872 24 95.8 39 .........A.............. GTATCGAAAAGAATAGATGCCCATTCTGCAATGTAACGT 850809 24 95.8 40 .........A.............. TTAAGTGATGCGGTAAATAAAGCATTAGATAATATAAGGG 850745 24 95.8 42 .........A.............. AAAATTTCTCCTATTGCCATATATTACTTTCACTCATCTCTC 850679 24 95.8 40 .........A.............. CGAAAGGATTCTTTCTATTCCCGTTATCAGTAAATACACT 850615 24 95.8 38 .........A.............. ATATTTCCGCTATTTGGATTTATAACGTCTATAATGAG 850553 24 95.8 40 .........A.............. ATAAAGAACGATACAAAGAATAATAACAATACAGCCGAAG 850489 24 95.8 39 .........A.............. TCACTAGAAAACTTCCTACTCTCATCTTTTCATTGTTTT 850426 24 95.8 38 .........A.............. ATTTATTGTGAGTGCGGACTTTCAAATAATCTAGACGT 850364 24 95.8 43 .........A.............. TTATTGATGGCTACGTTGTGAATGCATTTTATAACGGATCTAA 850297 24 95.8 38 .........A.............. ACTAAGGTCCTGTCTGCTGCTACTGCCTACCGGTCGCT 850235 24 95.8 42 .........A.............. CTTCCTGTTATACTTTCAGTAGCTTCTGCCCCTTGTAATTGC 850169 24 95.8 40 .........A.............. AGTTCATAATACCCTTGACCAGTGCCTGGTGCTAAAGCGT 850105 24 95.8 40 .........A.............. TACGACAGAAGCAGACATCAACCAACGCCATGATAATCCG 850041 24 95.8 39 .........A.............. AAACTAATTCTTTTAAGCTTAAGTATTGGGGCAACCAGA 849978 24 95.8 40 .........A.............. CGTTCAAAGCGTTTACATGAATTATTGTATAAATGTTGAA 849914 24 100.0 39 ........................ TTAACTGAGGACTTGAGCGATGAAGCCGAGGAAATTTAT 849851 24 100.0 45 ........................ CCGAGACGCCCTGGCGAGGGTGATACACCTCTGCCCCACCCTTCG 849782 24 100.0 41 ........................ ATAATTTATTATTAGTTGAAATGGGCTTAAGGCCAGGGGGA 849717 24 79.2 0 .C...C...T.........T...A | ========== ====== ====== ====== ======================== ============================================= ================== 97 24 99.1 40 GATAATCTACTATAGAATTGAAAG # Left flank : GCTTTATTGGGGGCATATGATAGTTCCATCCCCGGAGCTCCTCTTCAATAGGGTCTGAAGCCCTATATGAGTGGAGCCTTCGTAACTGTCTAATTATCTGCGACCTCATAATATAATAGTAGTTGAAAAATCTAAAAACCGTTTTAAGGAGTGGGGTAAAGACATTCCCAAGTTTACTAGGGATTAGCCTAGAATTCTGAGTGCCATCTCTATATAAAGAGTAATAATAAGATTAGGGAAAGAGATTACTCTACTGTTAATGGAGTTGTTTTGTGGTTTTGTATTTTTGTCCCGTTTTTGTAAGTGGTTTTTCTTTTGCGTTTTATGGAGGGGAGGTATGGTGTTGTCCTAAAATAATTACCTTTATGAAGAATGCCTTATTATCCCGGGTTTAGTAGGGAGTGAAAGGATGAGGAGAAAAATTGAAAAGATAATACAGAGTAAAGCTTATAAATAAAGAAGAGAGAACAAGATATTAGATAAAAGTTAATAAACCCTCA # Right flank : TATACCACAAACCTTGCTATCTATATTTGTTAACCTGTAACAGTTTCGCTATTTCAGCAATTCCCATTCCTTCTAAATATTGCCCTAGTCTCATTTAAATCCTTAGGCTTCTTGCTGATTAGCTTCTTTATTTCCCTTTTTAAGGCCCCTCAGCATGCTAAGCCCAACAGCCCCCATTACTAACACCAGATTTATCCATTTTTAACTCTCGTTGCAGCTATTATGAATATGAAAAAGACTATAAAATTAGCAATATCTAAGACAATTTATCTATATATAAAAACTTATTAGCTATTTAAGTTAAAGTAATTATATGGAGCAAGAGAATGATAACTGTGAAAAAATTATATCTAAGTCGTCATCAATTGCTAGGATAGTAGTTCATTATCAGCAAGCTTATGATATTTTAGATGAGATGGTTAGATTTGCAGACACACCAGCTAGGGCTCTTGATTCCGTTTATAAACTTTCCAGATTAATATCGAAGACTTTAAGGGATA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAATCTACTATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: R [matched GATAATCTCTTATAGAATTGAAAG with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.10,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-A [Matched known repeat from this family], // Array 2 860409-865757 **** Predicted by CRISPRDetect 2.4 *** >NZ_AHJR01000001.1 Sulfolobus islandicus M.16.43 chromosome, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================================= ================== 860409 24 100.0 39 ........................ AATTAAATCAAGAAGAAAAAGAAGTAGATGAGTTTTTTT 860472 24 100.0 40 ........................ AATGAAATTACAGAAAAACTTTTTGAGGAATTTGGATTAG 860536 24 100.0 38 ........................ GTATTGTTAATCACCAACTCACCGTTTTGCCAGTACGG 860598 24 100.0 42 ........................ TTTATAAATAGAGAGTTTGTTTTTAGCGTATCTACTTTCTCT 860664 24 100.0 41 ........................ ACAGAAGAAGATAAAAAGAAAGTCTATCAGAGCATAGATGA 860729 24 100.0 38 ........................ ACCCGCATTCAACCCCGCGGGGGAATCCCCCGGCCCCA 860791 24 100.0 39 ........................ ACGTTAGAGGAAGTACGCAAAACGTTAAGTACCGTCAAA 860854 24 100.0 39 ........................ CAAGGCTATGTACCAGTGCAAATAATAGGGCAAAGCGCC 860917 24 100.0 37 ........................ TGAAAGTGTGTATCACACCACACTACTACATTCTCAT 860978 24 100.0 37 ........................ GCTAGGGCGGTGGCAAACCATGTTTTACCAGTTCCAG 861039 24 100.0 39 ........................ GAAACTGAAGCACCTTGAGGCGAAGGGCCAAGCGGTGAT 861102 24 100.0 39 ........................ ATGGTGCGCCTTGTTGTTCTAAAAGTCTTGCTAATATAT 861165 24 100.0 41 ........................ ACGGGGTTAGCATTATTAGATTCCAATCGTAGAATAAGCCC 861230 24 100.0 37 ........................ CAAATCTACAAGATACGTGGGTTACTATCTCACCGCG 861291 24 100.0 39 ........................ TGCAGTAAAACCGCAAAATGGACAAATTCCACCTGGTTT 861354 24 100.0 37 ........................ TTCCCTTGTTGAATTAGTAACTGTTGTATCTGATTTG 861415 24 100.0 40 ........................ TCAAATGTACCCCGCAATATCCTCTTTCCTACATTCACTT 861479 24 100.0 41 ........................ AAATTTGATGTTTAATGTTGGTAGTGTAAAGTTTGAAGGAA 861544 24 100.0 40 ........................ GGTTGATATGCATATGTTTGTTGAAGTGTACGCGAAAATA 861608 24 100.0 39 ........................ AGCCAAAAAGTACTTCCTTTTTGCACATAAAAATTGAAC 861671 24 100.0 39 ........................ CCTCTTCTTGGTCTTCCTTTACAACTTCTTCCTCATCCT 861734 24 100.0 39 ........................ TACTAACCTTATCTTGCGCCCTAAGAGTAAGACCGTATC 861797 24 100.0 37 ........................ TTACAGAGTGTGAAAGAAGTCAGGTAAGAGATTAAGG 861858 24 100.0 39 ........................ GCTAATTCTCTTTCTGCATTTCTCTCTAAATTTAATTCA 861921 24 100.0 39 ........................ ATCAAGGATCAGGCAATATTATTAAATGTAATGGAGATG 861984 24 100.0 41 ........................ TTAAATAGATCTGTGAATCCTTCTCTTGAGAGATGATACGC 862049 24 100.0 39 ........................ CCCAATACGTTGAACCAATGCTAAGACCAGTTACAATAG 862112 24 100.0 40 ........................ ATCGAATTTCCATCTCATCAGGAACCTGCACAAGTTGCCG 862176 24 100.0 38 ........................ TCCTCATCTATATACATCACACCACTGAAATATATTAT 862238 24 100.0 41 ........................ ATCGATCAAGAGACTTATGAGTTATTAACTAAAGCAGTAGA 862303 24 100.0 41 ........................ ATACTATCACCTGTAGAGAGATACTGTGTCAGCAATAATTT 862368 24 100.0 40 ........................ AGTTAGATCAAACTCGGGAAGCAGTAAGAAAAGAAGTGTT 862432 24 100.0 37 ........................ AATGCTTGCCTTAGCTGAGATTTTAGAACAGGTTTAA 862493 24 100.0 41 ........................ AATGGACTCCTCACACGTTTAAGTTTGGGAAATCCAGTTAT 862558 24 100.0 41 ........................ CTTTCATTTTGTCTAGCTTATATTGAATAATATTTAATGAT 862623 24 100.0 39 ........................ CATTAACGCAAACTACTAGCACTTTCGCATTTACTTATG 862686 24 100.0 41 ........................ CAGGATGGGGAAGTAATTGATATGTTAAGAGATGGAAGTTT 862751 24 100.0 42 ........................ TCTGAAGTAATCCGTATTGTCCTGCAGTCTCGTAATATACTT 862817 24 100.0 42 ........................ CACTACTATAGAATGATGGTATGATGGTGTACGGGTCGGTAT 862883 24 100.0 39 ........................ AGGTCTGTCGATTGAAGAGCATTTATTATGTTACTAAGA 862946 24 100.0 40 ........................ CTATTTCCATCAGTTGATTGGTCTCCGACGTTAGGTGAGA 863010 24 100.0 37 ........................ CTGTTAAAGTCCTCATTGATGTATAATTCTAACCCTT 863071 24 100.0 38 ........................ TTTTGGCTTAGCAGATTTAAAGTTCAAGCATATCATTG 863133 24 100.0 41 ........................ ATAGTGTGTTCAGGTACTGGGCGTATTCCAACATACTCAAG 863198 24 100.0 39 ........................ AATGCTTTAAGTTTTTGTTCTATATCTTCTACTTTTTGT 863261 24 100.0 38 ........................ AATGTCGCTCTTTATAGCGTCCATAGCGTCATTTCTCA 863323 24 100.0 38 ........................ CAAATTCATCAGTTAAAAGCATAACAATAACTAATCAC 863385 24 100.0 41 ........................ ACGAAATGAGGACGGTGATAAGTATTGATGTCGTTACTATC 863450 24 100.0 40 ........................ TCATACATTCAAAAGCTTATATTAGATAATAAAGATAATT 863514 24 100.0 40 ........................ TATACCGCCGTGAAGTACAATGGATATGATGAAGGAACTG 863578 24 100.0 39 ........................ GGATAATGAATGTGACGTGCAATATCGTTGATAATATCA 863641 24 100.0 37 ........................ GACATCATATGACTACGGTTATCAATGGTCAGTAGGG 863702 24 100.0 39 ........................ TCTATGACCTTCTCTGGGATTTTATCTATCGCGAACATT 863765 24 100.0 38 ........................ TATCAGGGGATGTAGATTTACCGGTTTACTTTTTACCA 863827 24 100.0 40 ........................ TGAACAGGTTCGTACTCAGGCACAGGCTCGTATTCCCTCT 863891 24 100.0 39 ........................ TGTTACTTTACCTTCCCATCCTATTATTTCTTTTGACAT 863954 24 100.0 38 ........................ AAATAGTTTAGAAGCTTTTGTGGCGTAACTGGTGTGAA 864016 24 100.0 41 ........................ TTCCACCTTTAGCAATCCATTTCATAGATAAGAATTAGAAA 864081 24 100.0 38 ........................ AGGTTTTAGGTGAAAAGCTTAATCGGGTGAAAAATGTA 864143 24 100.0 40 ........................ ATAAGCGGAAAGTTTGAGAGTGTAACGGAGAAAGTTACAA 864207 24 100.0 38 ........................ TCTTAGACGCGACGAACTTCCTCATATACTTTATCGCG 864269 24 100.0 42 ........................ CAAATGGCACCGTATGGTTCAGTAATGGTTAATACCTTAATG 864335 24 100.0 39 ........................ GTAATAGATAATTCCTCGTTTCTATCGTTGAAAGGATCG 864398 24 100.0 38 ........................ ATAGCAATATGATGTACTATATTTAAATGAAAAACTGT 864460 24 100.0 38 ........................ TACTTTTCTTCACCTTTGATATTTAATTTTACTATGAT 864522 24 100.0 41 ........................ GTTATTCTATTAAATGTGCATACTTCTTGATTTGCCGCCAT 864587 24 100.0 38 ........................ CTAGTGCCAGGGTTCAGGGGTGTACCCTCACTGCCACA 864649 24 100.0 39 ........................ TTTAGATTAAGTTTTACATAAATTATAGACACGATAACA 864712 24 100.0 40 ........................ ATAAACTAAATATTGACGTGAAACCGCAACTAATAGATAA 864776 24 100.0 43 ........................ ATAACAATAATAAATGTTACTATTGAGGGCGTATTATTCCCAG 864843 24 100.0 41 ........................ ATGTAGTTGCATCTCCTTATTGCCGTTTCTGAACTTCTTTT 864908 24 100.0 41 ........................ AAAAGAGTATTAATTGATCTGGCTATAGCGTCCTTCCTTAT 864973 24 100.0 37 ........................ AGATTTTGTAGTGCTTCTTGCAGCAGTAAAGCTCTAG 865034 24 100.0 40 ........................ CTATCGGCTTATATCTAACATCCTCTGGGAGGCTTTCCAT 865098 24 100.0 39 ........................ GTATGCTTATCGTATAAAGTAATTTGCCAAAGTTGTACG 865161 24 100.0 39 ........................ TTCGATTTTGGGAATCCCACCGCCCAGCAATTCGCAGAC 865224 24 100.0 40 ........................ AACTCCAGTACTGCTTCGCCGTAGGATCCGTCCTCAGACG 865288 24 100.0 39 ........................ TTTCTATTAAGAGAAAGTTACACTTTATCAAAAGACACT 865351 24 100.0 37 ........................ AGAAACAGTGTATGGGATAAATTAGGTATAAGTGGCG 865412 24 100.0 39 ........................ CCACCACCACAGTATATAATACATTTGATGGATTATTAA 865475 24 100.0 40 ........................ TACTTCATCACGTCCACGTTTGTTATTTTTGTTGATTTAA 865539 24 100.0 38 ........................ ATTCCAAAGTTACGTCATCGATGACCACGTAATGGAAA 865601 24 100.0 40 ........................ GAATAAGCGGGGCGAAGCCGACGTGTACGCCGTGTCTTTC 865665 24 100.0 45 ........................ TCTTATATAAAATCAAAATTGTATGAAATCCAAGCTGAAGTTTTT 865734 24 95.8 0 .......................T | ========== ====== ====== ====== ======================== ============================================= ================== 85 24 100.0 39 GATAATCTACTATAGAATTGAAAG # Left flank : CTATTTCATAAACTTTTGGAAGAGGGTAGTTTAACCTTGAAGTTTGAGCTCTTAAGCTATCTATTGCAGTCCTAGTTCCAGAGATAATTGGAGAGGGAACAACGATTACAAGATTATCTTCTTTCTGTGCAGAGGTTTCGTTTAGAAGTCTAAGCAGAAAAGTTTCATTAAATCCCATGGTCACAAAATATGATTTCATATCATAAAATTGGTATTACCAACTCATAAATCTTTCTATAACTTAAGAGCTTGTAGCTGAGGGAGTTGTTTTGTGGTTTTGTATTTTTTGTCCCGTTTTTGTAAGTGGTTTTTCTTTTGCGTTTTATGGAGGGGAGGTATGGTGTTGTCCTAAAATAATTACCTTTATGAAGAATGCCTTATTATCCCGGGTTTAGTAGGGAGTGAAAGAATGAGGAGAAAAATTGAAAAGATAATACAGAGTAAAGCTTATAAATAAAGAAGAGAGAACAAGATATTAGATAAAAGTTAATAAACCCTCA # Right flank : TACTATAATGTAAGTTGGATTTTGTAAGTAGAGTCTTTATTTACAATAGTTACAATGGAGTAAGAGGACTAGTTTTAGCTTAAGATGTTGAAAATGAGCGACTTAATGGAAGCAACTAGATATATTTCGTATTAGCAAATATCATTTTTCTTTCGCATTTATTAATAAAAGTATATAAAAATCTTGGTGAATTTAGTTGACGTAATACGAGATACTCTTTTCCCTTAACAAGAAAAATTTAATACCTCATTTTTCATATTTAGGGTATGATACTAATCTTAACACTTGGATTCGACGAGAAGTTTCAGTACCGCGCATTAATGAGACAAGGCAAGAGTATTGAAAAGGTCATTGTTGTTGGAGGGTTCAAGGAGGAGAAGGCTAAAAAAGCGTTAGAATCGCTCACTAATTTTCTAAAAACAGTTAACGTTCCTTATGAGACTATTGAAGTTGAGCCTAGAGACTTTGAAGATATTGTTGAGAAAGTTGGCAAGGTTATT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAATCTACTATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GATAATCTCTTATAGAATTGAAAG with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-A [Matched known repeat from this family], //