Array 1 2636-87 **** Predicted by CRISPRDetect 2.4 *** >NZ_FUKI01000062.1 Crenothrix polyspora isolate RSM_CP1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2635 28 100.0 32 ............................ ATGTGATATAATAATCTTGACTTTGATAATAA 2575 28 100.0 32 ............................ GCCAAGGATTAAGCTACAAGATATTATTGACA 2515 28 100.0 32 ............................ AACTTCTTTAAGAAAAACATTATTTTTCGATG 2455 28 100.0 32 ............................ TGGCTCGTATTCGCAGTTTCCCCAATCTGATT 2395 28 100.0 32 ............................ CAACGGTAACTATATCTTAGTTGATACAGATA 2335 28 100.0 32 ............................ AAAGTCTTTGTTTTAATGTGCCATCGGCAGTG 2275 28 100.0 32 ............................ TACAGTAGCGAACTGAGTAAGTGACAGTAGCG 2215 28 100.0 32 ............................ AGCTCTCACACTCAAACCGAGTATATAAAATA 2155 28 100.0 32 ............................ TTAGATAGTTAGAAAGACTAGATTGTTAGTAT 2095 28 100.0 32 ............................ ATTATACTTATCTTAACCGGATTATTAAGTGA 2035 28 100.0 32 ............................ TTAAATTAAGAGTTAAACACGCCAGATGGGAC 1975 28 100.0 32 ............................ TTAAATTAAGAGTTAAACACGCCAGATGGGAC 1915 28 100.0 32 ............................ AGTACATCACTGTTAATTACATAACTAATATC 1855 28 100.0 32 ............................ TCTCGGCTTGTAGTAATAAAGTCATTACGAGA 1795 28 100.0 32 ............................ ATATTTAAACGGTAGAGAGAATCTATCAGGTG 1735 28 100.0 32 ............................ ACTAAAGATGATTTATAAGTATTAGCAGCAAA 1675 28 100.0 32 ............................ TATCTAAGTTAGTTAATTTAGTTAATTCTTTA 1615 28 100.0 32 ............................ TAGCGCCTCGCTCGTATCCGTCGCGTATGCGA 1555 28 100.0 32 ............................ TAGTACGTGGGCTTTTTTTTGCTTGCTACACA 1495 28 100.0 32 ............................ GTCGCTAACAACGTCAAGTATAAACCGCTTAT 1435 28 100.0 32 ............................ AGCTTACAATTGACCTTATTGCTTCGATGTGA 1375 28 100.0 32 ............................ TCAACCATACAGACTAGAACGAGAATAAATAA 1315 28 100.0 32 ............................ AAAATTATCAAGCCTCACTTGGAGCATCCCTG 1255 28 100.0 32 ............................ ATCACGATAGGCTGATGGATTTGGTTGATGAT 1195 28 100.0 32 ............................ TGTCGTTTTGTCAGCAATAATAATTATGTCTT 1135 28 100.0 32 ............................ TGTGGGCTAAGTTGATATACAACTCGCTGATT 1075 28 100.0 32 ............................ TTAGAAATTCTGTTTCTTATGCTGCTCGGATT 1015 28 100.0 32 ............................ TATCGAGTACAATACCAGCACAAGATGAAGGT 955 28 100.0 32 ............................ ATTATGGTGTTCTAAGAACGTAATAGCTGCCG 895 28 100.0 32 ............................ AGCATAAAAGGCGTATTTAACTATGGTAATAA 835 28 100.0 32 ............................ TATGCAAGCAGTATCAACAGATGTTTCTATGT 775 28 100.0 32 ............................ TATTTTTGGTAGCTTAACATCACTTATGCCGC 715 28 100.0 33 ............................ TGATGCACAAAATGAGCTATTCTTTAATTTTCT 654 28 100.0 32 ............................ TGACAACTCAGTCGCTAAAATAATGACCGCTA 594 28 100.0 32 ............................ CAGCAGTTATTGCCGACATCAACGCAGACAAC 534 28 100.0 32 ............................ ATTGACCCATCATATTTGTCGTTAAAAATCGA 474 28 100.0 32 ............................ ATGTAAAAAAGTTAATCACTGTTAGCCGTGAG 414 28 100.0 32 ............................ TTAATTGATTGTACACTTATACCGACAAGCGT 354 28 100.0 32 ............................ TGAGTATGCGTGGGACGCAAGACCAATCGTTA 294 28 100.0 32 ............................ CATAGCTGAGACGGATGGACGTACTGGCGACT 234 28 100.0 32 ............................ ACGGACATGCGCTGCAAAATGCCCATTGTGTC 174 28 100.0 32 ............................ TCTTCAATGCCATCAAAGTTACGCACCCAGGC 114 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 43 28 100.0 32 GTTAACTGCCGCACAGGCAGCTTAGAAA # Left flank : TGCGGCGAGTTTGGATGACTTGGCCAGTGTAATTTTGGGCGCTTTTGATTTTGATAACGACCATCTTTACGAGTTCAGTTATAAAGATGTCTACGGTATAACGGCATCTATTTCGCATCCTTATGCGGAGAACGAAAACGGTTTGTTCACACCGGATTACCGTGTGGGGCAAATGCCTTTATATGTGGGTATGAATGTGACGTTTCTTTTCGATTTTGGCGATAACTGGGAGTTTCTGTTGGTTGTTGAGGCGATTGATACCGAGGGTAAGCCGTTGGCCAAGCCAAAAGTGATTAAGCGGGAAGGCAAATCGCCGGAACAATATCCTGGGTATGATGAGTGACAGGTTTTTTGAAATCCCTTTTTAATACCAAAGTTTTGTTGGCTTTTTAAAAACATAGAAAAATCATAATGTTACGAAGGCGGATTTTTTCATTGGTAAAAAGGGGGAAAATCGCTTAAACTATTGTTGCATTTAATTTTTTTCGATTAAATGCTCT # Right flank : AGTTTTCGCGTCTTCTTGCCTCAGCACCCGTGAGCGCGTGGATTGAAAACTACCTTATTAGTTGATCTAATAATAGTTATATTAATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTAACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //