Array 1 348982-349381 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025249.1 Actinomyces sp. 432 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 348982 36 100.0 36 .................................... ACACCGACGGCGGCACGCCACCAGGCAGATGGGTCG 349054 36 100.0 38 .................................... CAGGCTCGGCGTCGACATCAGCCGGCTCGCCTCGTCGT 349128 36 100.0 39 .................................... CTGCTCACAGCGCGGGCAGTGGTCCTTGACGTAAATGTC 349203 36 100.0 36 .................................... TGATGGGGGTGAGCGGTGATGAGTAAGGCGAGCAAG 349275 36 100.0 35 .................................... CGCATGGGCCGTGACGCCGACCTGCACGACGGCGA 349346 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 6 36 100.0 37 GCCTCAATGGAGCCCGGTCGTGGAGACCGGGAAGAC # Left flank : AGCAATCCGGCAAACCACCATGCGCCCCAACCACACACATTCAATCCGGCAATCTGCTTGCCTGCGGTCGATCGGCGCGGGCCAGTCTTTCGAACCGCAAACAGCCACATGTCCCAGACGCCGCCAACCCCCACCTCTACAACCTCAAACGGGAAGAGCCACTTACGTTCTCCGTGTCCAAATCGATGACAAACACTGCCTACGGCCGCGGGGGCCGATCTGACACCCGCATGATTCCAACGTTCTGTTCGCGGCCGCTGCCGTCTCCTACCTCGTTTGTCATAGATCTGGACATTCCCTGCCCTCGCCTGCCGGATATGTGCCAGCGGCAAGCTGCCCGGCGTCGACGGCGGTCGGCGAGCAGGCGAGCATCCGACACTGCATGCGCTGGACACCACGCCACAGGCCCCATTCCCATGCGGAGAAGCCTGTTTTGCCGCCGCGCTTCAGTGGAGCCCGGGAAGACGATGGGTGGAAGCTGGCCCGCCGCCGGGGCATCT # Right flank : CAGCTCGCTGTTCCTGCCGCAGCGTACCAAGGATCGTGCCTGATCTCGCGAGCGCTGCCATTGAAACGTACAACTCGGCCACGGTGTCCCGCTCGGGGAATGGTGAGAAAACCGTGTCACGCCGCGAACTCGAGCGCTGCCCAGGGAATCGGTGGACACCGGAGCGCTCGCACGCAGTCGGAGTCCTTCGGTCCGGTGACCCTGCGTGTTGATTAACGAGCATGAGGCGTTCCTCCTTGAACTCGCGGTGCGTACACGCGCCAGGCTACCCTCATCGAAACAGCTTCTACCGATACCGGTGATACGGGGACGCTGCGGTACGCGGTTTGTTAGCGGGAGCGCCAGGAGCGCAGGCCGGCCTCACCGGCAGCAATCGCACCGAACAGAGCGCCCGCAATCGGCCAGATCATCCAGCTGATGTCCCAGCTGGAGCCGATGAAGGACCAGGCGAGGTAGATGGCTATGCACCCGATCCAGTACGGACCGGCGATCGCCTCAAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAATGGAGCCCGGTCGTGGAGACCGGGAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-14.60,-13.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [28.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA // Array 2 793012-789871 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025249.1 Actinomyces sp. 432 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 793011 29 100.0 32 ............................. GCGAGGCTCTGGGCGGCCCCGTACTTGGTCGC 792950 29 100.0 32 ............................. GACGCCCGCCGCGGGAGACAGGGGAACCGCCG 792889 29 96.6 33 ............................G GACGCCGTACAGGCCGTACCCGTCCGGGGCTCC 792827 29 96.6 32 ............................T GCCGCCCCACACCCAGACACTTGGGTGTGGGG 792766 29 96.6 32 ............................G ATGGGGGTGATGATGGCCGGGTCAGTCATCGG 792705 29 96.6 32 ............................T CGGGGCGGCACGGTCGGGGCAGTCGCTGCCGC 792644 29 100.0 32 ............................. TCGGTATCAGGGTCGTAGGTGTGCGCCTTAAG 792583 29 100.0 32 ............................. TTCTAGGTATGTGAGCCCGTCGCGGTACGTGA 792522 29 96.6 32 ............................T GGTATAGGGACAGCTTAGTCTTGGTGCCCCGG 792461 29 96.6 32 ............................A ATTGCAGGCATACCCTCCTGCACCTGCCGAAG 792400 29 100.0 32 ............................. AACTTGTCGTTCAGCTCGCTGCGGTGAGCCTC 792339 29 100.0 32 ............................. CCCGGTCGGCGCGTACGGCACCTCATACTGCC 792278 29 100.0 32 ............................. GGGATCTGCGCAGTCACTCATCCAGGCGGAGC 792217 29 96.6 32 ............................G GCGACCGCTGACTCCGCCAAGGCGACCGCTGA 792156 29 96.6 32 ............................G CATCTTGATGGTCATGGGGCCACCGATGCCGT 792095 29 96.6 32 ............................A TCCTGCTGGCCCCGGACGGCGGGCACCTGCCC 792034 29 100.0 32 ............................. CCGATCACGGGCGAGCAGCTGCGGCAGGAGAT 791973 29 100.0 32 ............................. GGAACCGCATCGATGATTAGTGACAATAAGGG 791912 29 96.6 32 ............................G GGGTGGACGGCCTCCGAGATCGACGCCCTGCC 791851 29 100.0 32 ............................. TGCGTCCGAATCTGCCCCAAATCTGTGGCGTT 791790 29 96.6 32 ............................T CACGATTACGCTAGGATTACCCGCCGGACGCC 791729 29 100.0 32 ............................. TGCCACCGCGCCTCACCGGCACGGTAGGCGAT 791668 29 96.6 32 ............................G ACCTTCCACGACCGCCAGCCCATCACGCCGTC 791607 29 96.6 32 ............................T TAATGACCTCGACACCGAGATGCTGCGCAAGC 791546 29 96.6 32 ............................G CGTGGCTCAGCGCACAAGGTCAACGGCGGCGC 791485 29 100.0 32 ............................. AGGCATCTTGGAGCCCACCTCCGTACGCGTGC 791424 29 96.6 32 ............................G GCAGCCCTGCTCATACGAGCGTCCCAGTGGGC 791363 29 96.6 32 ........A.................... ATGACCCGTGGCGACGGTGCCGCGGGATTGGC 791302 29 100.0 32 ............................. GCCCGTGTTGCTAATAGACGTACGTGAATCGG 791241 29 100.0 32 ............................. GCAGCAGTCGGCTTCATCCCGACATTCACCAT 791180 29 100.0 32 ............................. TGCCTGCTCCAGGACGTGGTCGCGGGCCTGCC 791119 29 96.6 32 ............................G AGGACAGCGAATCGTAGAGGAAGAGTGAGTCA 791058 29 96.6 32 ............................T AACGCGCAGTCGTACGCGCAATACGCAATGGG 790997 29 100.0 32 ............................. GGCCCCTGGCTCGACATCTACACACTCCCGTC 790936 29 96.6 33 ............................A CGACCAATCAATCAACCAAGCAAACATTCAAAC 790874 29 100.0 32 ............................. AACCAATCAATCAACCAAGCAAACATTCAAAC 790813 29 100.0 31 ............................. CGACGCGGCTCGATTTAAGCGTTGGGTGACG 790753 29 96.6 32 ............................G CGGGAGATCAACGCCGCCCAGGGAGCCGTGCC 790692 29 96.6 32 ............................G ACCTCGGCGCGGCCGTCGTTGTTGCTGGGTAC 790631 29 100.0 32 ............................. GCCCTCCGCCTCCACGCGCATCCGACCCACCA 790570 29 96.6 32 ............................G GCCATCTCCGCGTCCGGTGGGGAGCTGCTGGT 790509 29 96.6 32 ............................G GGCGACCGGCCGCCGTCGCCAGGGGTACGCAC 790448 29 100.0 32 ............................. GACCTCCTCGCCGACCTGACCGCCGCCGTCCA 790387 29 100.0 32 ............................. CGGCGGGGAGTCTGCCCCACAGCCCGGGAGGG 790326 29 100.0 32 ............................. GACACGCAGGCAGCCCTCCTGGACTCCCTGCC 790265 29 100.0 32 ............................. AACTGGGCCTGGTTGACGGGGACGCCCTCCTG 790204 29 96.6 32 ............................T GAGGTGTCCCAGCAGCTCCTGCGCGGTCATGC 790143 29 96.6 32 ............................G CCGCACGCGCCATGCAGGCAGCCGGCGCCACA 790082 29 100.0 32 ............................. GCGGACACGCTCGGTGACGGTCCGGGGCGCGA 790021 29 96.6 32 ............................G ACATAAGAGACGTCGACCTGTTCATCTTGGCC 789960 29 96.6 32 ............................G CATCGCTAGAGCAGCTGTCTTGTAAACAGCCG 789899 29 79.3 0 ...........A.....T.C...A..G.G | ========== ====== ====== ====== ============================= ================================= ================== 52 29 97.8 32 GTCGACCCCGCGCGAGCGGGGATGATCCC # Left flank : CGGCCGGGGCCTCGATCAGCCAGCGCAGCAGCATGACAGCCTGGGCCCAGCTGGTAGCGGCCCGCTGCCAGGGACGCGCATCGTGGTGGCGGCGGTGGGCGGTGATCCAACGGGACACGGTGCGGGCAGTAGTCACGGGGACGTCGAGAGTGGCACGATAGGACAGCACGCGGAGCCCCTTTCCGGGCTTGCTTTCTTGGTCGAAACACATGCTGCCGGAAGGCTCCGCGTGCACCCACCAACGACACACCCACCTTCCCGCACCATCCCAACGATCCCAACCCGCACCCCCTCAACCCTGATGAGAAACGCTCACCGTACCGGCAGATCGAAGGAGCCAAGTCGATTCCCGGCGCGGTGAGACCAGCCAAGGAGTCATGGTCGATCGCTGCTCGACGGCGTCGCTTCCGCAACTCGGCGGAGCTGGCACTAGGTCAGCAGTAAAGGAATCACGTGTAGAGTTTGCTGTCGTGGCGTTGGGATTCCAAGGATCCGCAAGC # Right flank : CCCCCACCGACCGCCTCACTTCATCGGGGAAGCGCTCATTCCCGCCCGAACCAGTCCTCCAGCCCGTCTGGGACCCCGACCCAGGCCAGTGCCTCACCCATCTCCTCCGGTCGCAGCAGTATCCGGTGAAAGGCGTCGGCAACGCGCGCACACTGCGCCTCATCCGCAATACCCGTGACAACCAGGTGGCAGCGCGGCCCCTCCCCACCGCCCTGCTTCTGCCCTAGAGCCGCGCCCTCCAGCGAATTCACTTTCACACTCAGCGCTGCATCCCAGGGCCCGGCATCCCCCACACTGACAACTCCACCGGCCACCTCCCAGGTACACACGCGCCCAGGACGGCTGGGCAGCCAGAAGCAGCCGCGGGCGAGCAAACCATTACCGGCCAGATCGGCGACGAATTCGCGCAGCCGCCCCGGGTGGAAGGGCAGCTCGGAAAACAGGTCCAGCGTGCGCACCCCGTGCTCAATGGGTCCTCCCCACGCCCTGGTAGTGGCAGG # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.66, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGACCCCGCGCGAGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGAGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 2168112-2170808 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025249.1 Actinomyces sp. 432 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 2168112 34 91.7 35 ....--.C............................ TCGGTCGCCGCATCGGACAGCTGGATGATCTGGTG 2168181 36 100.0 35 .................................... CCGAAGGCCGACCCGCCCAACTCCTCCCCCACCAC 2168252 36 100.0 36 .................................... CAGTACGTCGGTGTCGTCGTGGCGGCGTGCGAGGAG 2168324 36 100.0 36 .................................... GACCCTGCGGGTCACAGTCGTCTCCTCCACGCCACT 2168396 36 100.0 36 .................................... GGACTTCCGGTTCTGGAAGTACTGGTCGTCAACCAC 2168468 36 100.0 36 .................................... CTGGATCAGGCGGGCGAGGTAGATGCCGGTCCCGCC 2168540 36 100.0 36 .................................... CGCCTGCACGCTGTCGACGGAGGCCCGCCCATCGTG 2168612 36 100.0 36 .................................... CTACGTCGAAAACCTCGGTCTCGCATTAGCCACGAG 2168684 36 100.0 35 .................................... GTCCCGCCCGAGCTGCGCCGCTTTGAGACGGTCCT 2168755 36 100.0 37 .................................... CCAGACACACACGCAGAACCGCGGCAACGCACGAGGT 2168828 36 100.0 36 .................................... CGCCTGAGGGATGTTAGCGGTTTCAGGAAGGTCGCG 2168900 36 100.0 36 .................................... GTACGTCATTGCCACAGCGATCGCTGCACCAGTCAA 2168972 36 97.2 37 ........T........................... AGGTCCGCCTCAACGAAGACGGCTACTTCGAGAATAT 2169045 36 100.0 36 .................................... CCGGTGCTGCGTGGATCGCGACCCTAGCGGCGCTAC 2169117 36 100.0 35 .................................... CGGCTACTTCGAGAACAACCGACCTGCCAATGCCT 2169188 36 100.0 35 .................................... CCAGGCGCACAGGGCCGTAGCGCAAAAACTAGCTG 2169259 36 100.0 36 .................................... TCACGACCACCACTAGCAAAGCAGAGGTGCCACAAG 2169331 36 100.0 35 .................................... CGCACCCTCCTGTCCTGGCTGACGCCTGAGCGCAG 2169402 36 100.0 36 .................................... ACCACGACGGCGGTAACCTACGCGGTTGCGTGCGGT 2169474 36 100.0 35 .................................... GCAGCACTGTGCGCCGCCGTGCAGCTGATCGAAGA 2169545 36 100.0 35 .................................... CGCCACCAACCAGTAGTCGCCGAGGAGCACATTGT 2169616 36 100.0 35 .................................... TCGATCTCGTAGATTGCGTCCTCGACCCGGGTCAG 2169687 36 100.0 37 .................................... ACGGCTTCAGCACGCAGGTCTACTTCTACAGCGCGTC 2169760 36 100.0 37 .................................... ACGAGCACCTACCGGAGGGATTCGAGGCCTTTGTGAC 2169833 36 100.0 36 .................................... CTCACAGCGCGGACAGTGGTCCTTGACGTAAATGTC 2169905 36 100.0 36 .................................... GGCCTGGTCGGCCAGGTAGTCGCTGATCTCTGAGAC 2169977 36 97.2 36 ........A........................... GTCCGTGTCCGCTGACGGCACCACCAGCGCCACCCC 2170049 36 100.0 37 .................................... TCCATCTGTCACGGTATGCGGCGTACCTGGTCGCGAT 2170122 36 100.0 36 .................................... CAATTCGACCCTGTGCCCCTGGACGGCCGCGGCGTC 2170194 36 100.0 39 .................................... GCGGTCATCGATGAGTTCGACGACTCCAAGGATGCAATT 2170269 36 100.0 37 .................................... CGGCAATCGACGGCGGCGACGACCTGGTGACGCCGCT 2170342 36 100.0 36 .................................... AAACAGGTGGTACGGCCGCTACTGGCCCGTCGAAAT 2170414 36 100.0 36 .................................... CACCCAAGAGATCCACACCCTCACCACGGTGGGGGA 2170486 36 97.2 36 ........T........................... GTTTAGCTGCTGCCCACTGTATACGGGGTCAAGCCA 2170558 36 100.0 36 .................................... CCACGAGGACCAGTCCTGGTGCTCCCGCAGCTCGTC 2170630 36 100.0 35 .................................... ACGCGTGTCTCCGCTGCATGATAGCTACGTGCGAG 2170701 36 100.0 36 .................................... CACCGAGCCCGTCGATGGCGTGCAGGCGGATGCGTG 2170773 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 38 36 99.6 36 GCCTCAATGGAGCCCGGCCATGAAGGCCGGGAAGAC # Left flank : CGGCATCGGGTTGTTCCAATGCCGCCAAATGGAGCCCGGCCACTAGGGCCGGGAAAGAGCGTCATCTGCAAATTCGCAGGTAGGACCCTCGCTACACCTCAATGGAGCCCGGCGGCAGAACCGGGAACTTTACAGGCACAGCCTGCCGAACTATACCTGCATACCTGACTCTTCTATGGGCTCTGTTCCATGCGTGCACCGACTACGGCATGAAGCCCAGCAGAACGCTCCGGGCGACCACCTCGCAGCCGTCCAAGGCGTTGACGTCAACGCCCCGACAATGTCGCGAGCAGCGCCACTACGGCCAGGATCAGTGGTGGAATGTTATCGACGACAGTCTGCCAGACCTGCGCCTTGTGCTTACTCTTCATCCTTTTGGCCTTGTGACGCCGACGTGAAACGTCGGCTCGATGAACGCCCTGACCGACCATCACAACCTACCTCCTTTCACCGTTCGTAGCCAGGGTAATATATACAGGCAGCTCGTCGTCAACCGCTAC # Right flank : CAGCTCGCGGATTTTGCCGCGGCTGGTCAAGGATTCTACGCGGTCTCGCGAGCGCTGCCGCAGAAACGGGCAAGTGAATCGTGTCCGCTGGTCCGCCGACAACCAGAAAACCCTGTCATACCGCCCTTTCGAGCACTCCCCTGGGATCGGGGCAGCACCGGAGCACTCGCTAAACAATCTGGGCCCCCTGAGTGGGCAGACCCGCACGCCTACCGACGAACGTGAAGCGGTCCTCCCCCAGTTCGCCGAGGTCGACGATCACCACCGAGTCCTCGTCTAGGTTCATGATCTCCTCACTGTCAGCCCTTAAGTGGACCAGCTCGGTCCGGTTCAGGTCGCAGATGAACACAGAGTACTGGAGCCGTTCGCCGTTGGCCTCCATAAGCTTGCAGATCCGGCGCAGCCGCCCGGGCTTGCGGATGTCGTACGCGATGAGATATCGGCGTCGGTTCGTCCTCATCTAGTCACCATCGCCGTGTAGTCATCCAGCTCCCCCAACA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAATGGAGCCCGGCCATGAAGGCCGGGAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-15.90,-15.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 4 2724181-2723272 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025249.1 Actinomyces sp. 432 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 2724180 37 100.0 34 ..................................... GCAATGCGGAGTTCCGAAGGCAGGTAGACCGTAA 2724109 37 97.3 35 .....................T............... CTGTGCGAACAAACTCCTCCAGAAACGCAATGATC 2724037 37 97.3 37 .....................T............... GTTGAGGATCATCAGCTAAAAGGGCAGCCCTCTTTTT 2723963 37 97.3 36 .....................T............... CTCCTGCGCTTCTCGTAATAAACCTTATTGTCCAGC 2723890 37 100.0 31 ..................................... TGCGGGTGCGGGTGCGGGTGCACCCGCCCAC 2723822 37 100.0 36 ..................................... CGATACGTGAGGTGCAGAGGTGCGCGAGGCAGCCAA 2723749 37 100.0 36 ..................................... GATCATGACGCTCATGAGCGCCCCTCCTTCTTTGGG 2723676 37 97.3 35 ...G................................. AATAGCGCGAATCCAGTTAGGCTCGATCGTCTCCC 2723604 37 97.3 36 ...G................................. GAGTACTGAACGCCGAGCTGCGGGTTCTTGGCGGAG 2723531 37 97.3 38 ...G................................. TGTCCTCGCCGTCGTTGGCGAGGTACCACAGGTGCTGC 2723456 37 100.0 37 ..................................... ACCTCCGCCTTGGCTTCGCGGGCCTCGGCAGCAGCGG 2723382 37 91.9 37 .....................T.....C.T....... AAAATCTTTGGATCCGCCGCAAGTCGGCCGGTCAGAC 2723308 37 91.9 0 ......................G.........C..G. | ========== ====== ====== ====== ===================================== ====================================== ================== 13 37 97.5 36 GTCAGGAAGCACCTCGCACCTCAAGGTGCATTAAGAC # Left flank : CTTGGCACCGATTGCGTAGGGGCGGGGCGGTGTTGCAAGGCGTGGTGCCTGAACAGAAGGTGCAATTGCGTGGGGTGGATATTGGATGGCGGATGGTATTCGTGGCCCGGAGTTTGAGGAGGCTGCAGGTGGCGGGAGGTGCGCTGGGGCGGGCTCGGTGGCGTCGGTGCGGCGGGGAGGCCTGGAGGTGGCGAGAGGGCCGGTTGCGGGTGTGGCGTGTGATGCAGTTGGGGTGTGTGGGGTTGGTGTGGTGCGCTCCTGTGGGTCACAATTCAGTCTACGGTACAAAGTGTGGTACGTTTTGACCTCGACTTTTCCGCATGACTTCGTTGAAAGTTGGTGGCTGGAGGGGGTCGGAGGGGTGTCGGTGGCGCTTGGCTTGTTTTCAACGAAAGGTGGTAGTTTTGGCTTGGTGCTAGTCGGTCCCGTGGGGTGCTTGCGGGGTCGGTGGCGATCTCGAGCCTGGAAGTGGCGGTATGGCGCGGTTTCCAGGGGTAGGG # Right flank : TGCTCGGGGAGGGTGGTATGCGCGACGCCCGCCGTGGGGCATGGTGTCAAAATCGATGACAAACGCCTCACGCGCGCGCTAACCCCGATCCGAAGGCTGCATGATTCCAACGATTTGTCCGCAGCTGCCGACGTCGTCGGCACCGTTTGTCATCGATTTTGACACCCTCGGCCGCTGCCGGGCGGAATCAATGGCAACGGCGAGCCGTCTACCGCCCGAACGCCCAACCAACTCGCGTTGGCGGCCCTACCACCAGTGTGGGTTGGGCCACCGCTCAACAAAGAGACAACGGCAATGGACTCAGACGTGGGTACACCGCCATCTTCGTCTCACGGTGACGCGCGTTCGTCGGAGGAATCAGCACACACCCGCGGGCGGCAGGCTCCCAGACAGCACTATCGCCCACGTGTGTGGCGGTTGTCCCGAATCCGGGCACTTTTCCGGCCTCCGCTCACCAGGATGTGCGGCAGCGATTGTCGCTGTCGGTCGAAGTGCCCGCA # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.62, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGAAGCACCTCGCACCTCAAGGTGCATTAAGAC # Alternate repeat : GTCAGGAAGCACCTCGCACCTTAAGGTGCATTAAGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.60,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //