Array 1 338-36 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_WHOB01000029.1 Paenibacillus phytohabitans strain LMG 31459 Contig_31_93.4421, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	=================================	=====================================	==================
       337	    33	 100.0	    34	.................................	AATACAGCTTTACCGCCTACGCGAGTTACGGCTT   	
       270	    33	 100.0	    33	.................................	AACATAATATTTTTTCCTCCCGGTCCCATTTTG    	
       204	    33	 100.0	    33	.................................	CTCTACATCCGTCACGGCTGTCGTGGCGGGCTT    	
       138	    33	 100.0	    37	.................................	GGATCTGTTGTAGGTTGTGCACTAGGCTGTGCGGATG	
        68	    33	 100.0	     0	.................................	|                                    	
==========	======	======	======	=================================	=====================================	==================
         5	    33	 100.0	    34	GTCGCACTCCGTGTGGAGTGCGTGGATTGAAAT	                                     	       

# Left flank :   ATCCAGTTTACCCGCTGGTTCCTCTACTTGCTGACTGCGCTCATTCTGCTGGTCATTTTCCTCGGTGTGCCCCAGGCGGATAACCCTATATTTTCACTGCTCAGCTTTGGCCTGCTGCTGTCTCTCCTGTATATGGCGGCTGGTCTGGCCCATCCCTCTATTATATTTTTCCGGAAAAAACGTTCCCGAATGTTTGCACTCGAACTGTTCGGGCTGATAAGCGGTTTGCTGATTCTTCTGATGACGGTTTTTCATACTTAGGAGGGAATTAATTACTTTTGCAGAATATAATCCTGGATCAACAGGTAGAAGATGATCAGTGCGAATGGCAAGCTCCCATGAAATCCCCGGGTCCTTCGCACCTCAGAATTTGACGAAACCTTCTAAGTTAGCGATTGTTTAAGAAAAGTCAACGGCTGATCGATACTTATTGTAGTATCGTTTCGGGGAAAGTGCAGTGAATTGATGCAGGAACAGCATGGAATGTGCTGGTTTCCGCT
# Right flank :  TAGGTAAAGGATGTTCAGGCCGCAGTAGCAGAACTG

# Questionable array : NO	 Score: 9.06
# 	Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACTCCGTGTGGAGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     F [9,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-6.00,-6.20] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [28.3-50.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,4.77   Confidence: HIGH] 

# Array family : NA
//


Array 1 7-443 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_WHOB01000039.1 Paenibacillus phytohabitans strain LMG 31459 Contig_46_92.6142, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	=================================	====================================	==================
         7	    33	 100.0	    33	.................................	TTCGTCCAGATCGTAGCTGACCGTAATCTCACC   	
        73	    33	 100.0	    34	.................................	CTCCTAACCTTGATGATTTAAAGGCAGCCATTGA  	
       140	    33	 100.0	    33	.................................	AAGCAGAAGCTTGAGGTTGGCGAACATGACCGG   	
       206	    33	 100.0	    36	.................................	TTCGAGCTGGCCAGCACTAAAGAGGGCGGCGATGCA	
       275	    33	 100.0	    35	.................................	GAAATCGAACAACAGATTGAACAACAAAACGGCAA 	
       343	    33	 100.0	    35	.................................	AGATCATAGCGGCCCCAGGCGAAGATGGCGTGGAG 	
       411	    33	  69.7	     0	.........A.....ATA.A...AA.A.A...A	|                                   	
==========	======	======	======	=================================	====================================	==================
         7	    33	  95.7	    34	GTCGCACTCCGTGTGGAGTGCGTGGATTGAAAT	                                    	       

# Left flank :   CTCACCG
# Right flank :  AAACAGATCATGACCCAGAAATCAGGCATGATCTGTTTTTCAATTCATTTGCTTGTAACCTTACAATAAGTCTTTATCAAGAATCACTCAACATCGGTTGCCGGCTGCAGCCAACGCGAACCCATTACAGGCTCTGCTGTAGCAGTGTAGCCTTCGGGCAGATAAGTGGAGACCGTTCCTTTGGTGATAACTTGCGGGTACATCATATCCGGATCGGGCAGGGTTATTTTGAAGTAGATCACTGCTTTGGTGGCACTGGTGAATTCGATGCGCTCTACCGCCAGGCCGTAGCCGGGGTTAGGCAGATTATCGACGGTGATGGTGGCTTTATTGACGCCTTCAGCAGCTTTTTCAAGTACGACATCTGAAATGTAGTTATTAACCGGAACTGGTTCCGGTTCAGAAGGCTCAATGACTGTATCGTCTTGGTTGATCACCCGCGCTGCAAACTCAGCAGCATCATGAACCATAACAGCGGCCTCGGAGCGGGTGATGATATC

# Questionable array : NO	 Score: 9.05
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACTCCGTGTGGAGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [6,9] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-6.20,-6.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-10] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [3.3-63.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0.64   Confidence: HIGH] 

# Array family : NA
//