Array 1 2118939-2124204 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849780.1 Acinetobacter calcoaceticus DSM 30006 = CIP 81.8 acLsb-supercont1.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================================== ================== 2118939 28 100.0 32 ............................ TTGTTAAAAAGATCGCTAATGAGGTTGTAGAC 2118999 28 100.0 32 ............................ TCCGCCTCCTCGTTCCTCGTCGTTGTCGTCGT 2119059 28 100.0 32 ............................ GCAAGCGACAATGCAAGTTTGGGCATTCGTAA 2119119 28 100.0 32 ............................ AGCACTCGGAGAAGCTTCAGCAATAGCAATTT 2119179 28 100.0 32 ............................ AATAAAAAAGGCGGATGCGGTGCGTACGGTCG 2119239 28 100.0 32 ............................ ATTCAGGATGGTTCCAGAAACCGTATTGATTA 2119299 28 100.0 32 ............................ AATACCAAGAGATGTAAACGCTATTAGAACTA 2119359 28 100.0 32 ............................ AAAGTAAAAGCTTGGAGCCAGTCAATGAAATT 2119419 28 100.0 32 ............................ TTGTGAAGCAGACATTACATTTGAAATGGTGA 2119479 28 100.0 32 ............................ CCACTCCACCATCGTCATTTCAATATGGAAAA 2119539 28 100.0 32 ............................ CAGATCCCGCCGACTCCAGCCCTCACACCTGA 2119599 28 96.4 32 ...............A............ AGAAACACGACTTTGAAATATGTAAGATCTAT 2119659 28 100.0 32 ............................ ATTCACGTGAACATGCAAAGTCTGTTGCTGAT 2119719 28 100.0 32 ............................ TTCAAGATGTTTACCCGGCAGATGATGAACCG 2119779 28 100.0 32 ............................ ACAGCTTTATTCGCAGCTTTGAGACCTGCATC 2119839 28 89.3 32 ...CG.......A............... AACAGTACAAATATTTCAGCGTTGCAGGAAGC 2119899 28 82.1 32 ...G......ATGT.............. ATGAACCTTTTGCTCATTTCAGTATAGACACT 2119959 28 82.1 31 A..CG.......A...G........... AAACTAGAAACCAATATTTATTTATGTCTGA 2120019 28 82.1 32 T..T......A.AT.............. TTTAAATCAACAGCAACTTTTGCAACATTCCC 2120079 28 89.3 32 ...G........GT.............. ATTTCACCGCCGCTTGTCTGCATGAAGTCACC 2120139 28 92.9 32 A..G........................ ATAAAATATTTGTTCCGTAGAGCGCTTCTTTC 2120199 28 92.9 32 ...CG....................... TGCTCAAGATTATGTTGATCGAACTCTCGACA 2120259 28 96.4 32 ...G........................ TTACGGCGTTTTATCTTGTTCCATTTCTTCTC 2120319 28 96.4 32 ...T........................ CTTCATTAAAGAAGTTCATATTTTTTAATTTT 2120379 28 92.9 32 ...T........A............... CTACTCCTTGATTACAAAATCCCTTAAATCGT 2120439 28 96.4 32 ...G........................ ATGTCGGTTTTCAGCAACTTTTAAAGCCTAAT 2120499 28 100.0 32 ............................ ATCCCCGTTTGCATTGTGTCATACAGCCGTGA 2120559 28 92.9 32 ...G........T............... TCATAAAAGAAACGGCCATTTTCTGAATAAGT 2120619 28 92.9 32 ...G........T............... CAAAAGCGTTCACGGTCTTGTTGTCTTTCTGC 2120679 28 85.7 32 A..CA.......T............... ATTTCACCACCGCCTGTCTGCATAAAGTCACC 2120739 28 85.7 32 T..G........T......G........ GGTGTTTGTGTGACACATACAGAAGTTGCCGC 2120799 28 85.7 32 ...CA.T......T.............. ATTAATTGATGCGTTCTGGCGCGCAATGATAG 2120859 28 92.9 32 ...T.........T.............. TATGTATTGGTTACGATAGGCAGTACGAACTT 2120919 28 89.3 32 ...CG......T................ TTGTGCTTAGATCCTTAAAAATGGCCTTTGAT 2120979 28 89.3 32 ...G........AT.............. GCGATATGTTTAGCAAAATGCCTGATTGGATG 2121039 28 92.9 32 ...CG....................... CCAACCACACTTTGATACTCAACGCTAATCTC 2121099 28 92.9 32 ...CG....................... CTAATAAGCCAGTCATTGCTGTGGCTTGTTCA 2121159 28 92.9 32 ...CG....................... CTACACTCCTGAGCGTTTTGCAGCAGCCATCT 2121219 28 92.9 32 ...CG....................... CATGCAAATACGATAATTTCAACTTCTTCAGC 2121279 28 92.9 32 ...CG....................... AATTCCATGAATCGTGCTTTAAGTTCTGCGGT 2121339 28 92.9 32 ...CG....................... AACTAACAATTTGTTGCTATTGGGATCATTCG 2121399 28 92.9 32 ...CG....................... ACCATCAAGCAGCCAAGTACCTTCTTTGGGAA 2121459 28 92.9 32 ...CG....................... GTGAAGATGGTAAAAAATACCTTTCTGATAAC 2121519 28 96.4 32 ...G........................ CACAAGCTTTAAATATGATTGATGCGTATGGT 2121579 28 92.9 32 ..CG........................ TTCGTCAAGGGCTTTGGCGCGGCGTCTTAATA 2121639 28 85.7 32 ...CG.......GT.............. AATAAAAAACTAGAAGAGCAAGCTGCTGTTGC 2121699 28 96.4 32 ...G........................ AACCATTTTGTTTTGTTGAACGTGAGCTTTGA 2121759 28 96.4 32 ...T........................ GTGAGGATGCCAAAACTCATAAAGCACATTGT 2121819 28 92.9 32 ...CG....................... ATGACGATAGAAAACTGCCGCTGCATTTCACG 2121879 28 96.4 32 ...G........................ AGCAAGGCGATAAGTTGAGGTGATGCTTGTCT 2121939 28 85.7 32 ...GA.......GT.............. AGAAGATATATACGAAACTGGCGAAGCCTTAG 2121999 28 89.3 32 ...T........AT.............. TTTAGCGATCCAGTAGTGATTAACACTCGGTG 2122059 28 92.9 32 ............AT.............. ACGTTAGCTATCGATATAGACCGAGAAAGCAA 2122119 28 92.9 32 ............GT.............. AGTCTATGCAGTGCCATTCTTTCCTGAAAATG 2122179 28 96.4 32 ...G........................ AGTACGGGCAATATCAAACTTCGTGGTGGACA 2122239 28 92.9 31 ....T........T.............. CCTACGGGCAACATCCCTAACACACCCACCT 2122299 28 89.3 31 CA..........A............... AAGTTGGTTGAACCATATTCTGATGGGGTAA G [2122323] 2122359 28 85.7 32 ...CA......TT............... TATCTTTCATTAACTTTGCATAAGCATTTAAA 2122419 28 89.3 32 ...G........AT.............. CTGATCAAGTGCAATTTCATCCTAATGTAATT 2122479 27 82.1 32 ...CG......-.T..........T... ATCTTAATGCCAATAGCTTTAGCTTCCGCGCT 2122538 28 85.7 32 ...CG.......AT.............. TACATACTTGCTGTCACCTTTTAGTACTTCAG 2122598 28 89.3 32 ...G........AT.............. TCCTTTTCTCAGGTTGCACAGCTCATACTGTT 2122658 28 89.3 32 ...G........GT.............. AAAGTCATCAAATGTAGTAATTAAATGTGAAC 2122718 28 92.9 32 A..G........................ ATTCAGTTTTTTGCACAAACAATTGGTATGCA 2122778 28 96.4 32 ...G........................ GTTATGAAATGCCTGAGTTACAGGAACATCAC 2122838 28 92.9 32 ...G........A............... AATCCTTTTGACTGCTGATATGTACGAGGTAC 2122898 28 89.3 31 ...G........AT.............. AAGTTGGTTGAACCATATTCTGATGAGGTAA G [2122924] 2122958 28 82.1 32 ...CG......TT..............G AAAAACACAGCAAATTTGCGCAATGGTTATTT 2123018 28 92.9 32 ............AT.............. TCTATTGCTGTTCCTGGTAGTAGAATATCTGT 2123078 28 96.4 32 ...G........................ TCTTTAGTGGTCGGATCGATGACACGCATATA 2123138 28 85.7 32 ...G.......TGT.............. CAAATGACATCTAGAACATCTAACAGATCTTC 2123198 28 96.4 32 ...T........................ TGGACAATCTGAGCCTTCACCGCTTCCAACCC 2123258 28 89.3 32 ...G........GT.............. AGTACATGCAACGACAACAATCGTTAAGCAAA 2123318 28 92.9 32 ...G........T............... ATGCATCGGAATCACCAAATACATGTGTCTGA 2123378 28 92.9 31 ...CG....................... TGCTCGGATCTAATCCTATTCCGCTCATAAG C [2123403] 2123438 28 85.7 32 A...T.......GT.............. TTTGATATTTTCAGAATATTAATTAGTGGGAT 2123498 28 89.3 51 ...GT........T.............. TGCATGAACATTATCAAGGACTTCCATTAACAATTGATAAGCCTTTGTTCA 2123577 28 92.9 32 ...G.....T.................. TCAATCAGTAACGTCTTTTTTGGTGTGACATC 2123637 28 85.7 32 ...G.......TGT.............. AGCTAATTTAATGCAGCCATGTGAGCGATTTA 2123697 28 92.9 32 ............AT.............. TAACGGGGTTAGAGCCAAAATCTGGCCATACT 2123757 28 92.9 32 T..G........................ AATGAGGTTGTGTTGCTACTGACACCTGAAGG 2123817 28 92.9 32 ...CG....................... TATCTGCAATGGAAGGTACTTCTTCTGCCAGC 2123877 28 96.4 32 ...G........................ ACGTCTTCTAATGGTGGACTCTAGTCCAATAT 2123937 28 85.7 32 A..GG.......T............... TGCCGTGGCGGTCCCCCTTCTGTTTCTTGTTC 2123997 28 89.3 32 ...T........AT.............. TCGCAATAAAAAACCACTCGAGAGTGGCTTAA 2124057 28 89.3 32 A...T.......A............... CACAAGACATGGGCGCTTAGCTCTTTGTGGTA 2124117 28 89.3 32 ...G........A.......C....... ATATTGCGCAAAGTTCCATTTATACGCGCTTC 2124177 28 75.0 0 ...CG.......T..A.A......AT.. | ========== ====== ====== ====== ============================ =================================================== ================== 88 28 92.3 32 GTTACTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAACATTATACAAGCAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGAAAAAACTCTCACGACACTATTGCTGATATAGCCAACAGCTACCTCGATCATGGAAATTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTGATGCCACTCGCCTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATATATTTAACCCAAGTACCTCATAGCGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTGAACTTAACTCTA # Right flank : ATTTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGTTTTTCACGAATTTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCATTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCTTGTGACCCGACGAACAGGGTACAAGTTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTACGGTCGGGTTCCTAAACCACAAGTATTCTAGGAAGCGGACAAACTGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTAAAATATGCAAATTTGATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCAGCGTCGAAGCCAATAACATCCCCATGAATGTATGAGCATCATAGCATAACTAAAATAAAATACTGTGCATTTTATCAACAGTCCGCTACTGATGAACATATTTAC # Questionable array : NO Score: 5.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.61, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.20, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACTCATCGCCCAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTACTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [17-60] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //