Array 1 37247-39736 **** Predicted by CRISPRDetect 2.4 *** >NZ_MRUT01000003.1 Acinetobacter indicus strain IHIT27630 NODE_3_length_127948_cov_37.1162_ID_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 37247 28 100.0 32 ............................ TGCTTAACCATGCGTTCAGCAAGCGCCAGAAT 37307 28 100.0 32 ............................ TCAATATAATGTTCGGCAGTTGCCTTATCATT 37367 28 100.0 32 ............................ GCCAGAGCCAGGACCCTTTTAAAGAATTAGAA 37427 28 100.0 32 ............................ TGATAAGCCGCATCCTCAATTTTAGTAATGGA 37487 28 100.0 32 ............................ TTGGAGTTTTCATCCGCAGTTTTGGTATCAAT 37547 28 100.0 32 ............................ TGAAGTTTTGCCGAACCAGAACGGAATGTGTC 37607 28 100.0 32 ............................ TAAAGACCTAAACCATGACATGCAATTGCTTT 37667 28 100.0 33 ............................ ATGAACAATATTCAACATCACATTACTTTTCAT 37728 28 100.0 33 ............................ TGAAAGTCACGGCGCTGATATGTGCGTTTACGC 37789 28 100.0 32 ............................ TGTCGGCGGCGTATGTTTCGGGACCTGCTTAA 37849 28 100.0 32 ............................ TGTAGAGCGTATGCGCATAGCGCACTATCTTA 37909 28 100.0 32 ............................ ATCAAACATCGGCACACCAGAAGCACGTGAAA 37969 28 100.0 32 ............................ CTCCTGAATCTTACAGATTGTCTGTACAGTCT 38029 28 100.0 32 ............................ TTTACGCACAAGCGAAAGTGAACAAACGAACC 38089 28 100.0 32 ............................ ACCAGACCGAAGATTTATTTCTCCTGGATGAT 38149 28 100.0 32 ............................ ACACAACAACACCAGAACTGGAACGGGCAATT 38209 28 100.0 32 ............................ CACTATTCGCAAACTTGACAGTGCCAGCCGTG 38269 28 100.0 32 ............................ TACACGAAAAATATGCCACAGAATGTCAGACA 38329 28 100.0 32 ............................ AGTGCCATATTTGTTTTTTAAACCTTGTTCAA 38389 28 100.0 32 ............................ TGTGTTTCAGATTTTGAAATACAATTGCCAAT 38449 28 100.0 32 ............................ TGGGAAAGCATAAAATTTCGTAAGTGATTGAT 38509 28 100.0 32 ............................ TGAGGATCATACATTTCTTTGCATTGTTCCTC 38569 28 100.0 32 ............................ TTTTTATGATTTGCAACAAGATTGCTAGAGCC 38629 28 100.0 32 ............................ TAAGCGGTAGTTATTAATGATTGTTGTTTAAA 38689 28 100.0 32 ............................ TCAATACCAAAAACCTCACAGACACCTTTCTC 38749 28 100.0 32 ............................ ATTTGCTTTGCGAAATTCATAACTCTAGTTGC 38809 28 100.0 32 ............................ ACAAGCCGAGCGGCATTGCTGACCTGGCTGGC 38869 28 100.0 32 ............................ TTCATATTGTCGCTCGAATTGTTTTGCCACGT 38929 28 100.0 32 ............................ TTCATATTGTCGCTCGAATTGTTTTGCCACGT 38989 28 100.0 32 ............................ AATACGCGGAAATTGAGCAGGTGCGGCAGCAA 39049 28 100.0 32 ............................ TTTCGGTCACTTCCATCGCCAGTGCTTTGCTC 39109 28 100.0 32 ............................ GTTAAATTCCGGTGGATCAATCCAGGCATTGC 39169 28 100.0 32 ............................ AATAAATCGGGTCAAGAGCCGATCTTAGAGGC 39229 28 100.0 32 ............................ ATGTGTTAGTGACGGCGGATCTGGGTGGTAAC 39289 28 100.0 32 ............................ AACCGGAAGTTTTGCCCTTGTCCGATGCAATC 39349 28 100.0 32 ............................ GACGGGTGTGACACTAAGTAAGGTGTTGGGGC 39409 28 100.0 32 ............................ ACATAACAGTACCAATATTGGGACACAGAACC 39469 28 100.0 32 ............................ TGACCAAACATTGGTTTATGACGCGACCGGAA 39529 28 100.0 32 ............................ GCTGATGCACCAACACCACCACCCAAGACAGG 39589 28 100.0 32 ............................ TTTGATCGTTTCAATAGAAACCACCTCAAATG 39649 28 96.4 32 ............G............... GGCATGGGGATGGGCAAGACTATTTCGACATT 39709 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================= ================== 42 28 99.8 32 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : AAAAATGGCTCAGCCAATATTTGGATTATGTGCATATTAGTTCTGTTAAAACTGTGCCATTAGATAAATTAACCGGTTATGCAGTTTATAAACGTAAGCAAGTGAAAAGTAGTGCGGAAAGACTCGCTCGGGCGGAAGCTCAAAAAGGCCGTTATGATTACGAAAATGCGTTGGCACATTATCGGAAGTTTATTAAAACAACGAACTTACCATTTATTAATATGCTGAGTGATAGTAGTCAGAATACAGAGTTTATTCAGAAGCATGCATTTAAGTTATTTATTGAAAAACTTCCCGCTGAAAAATCTGAAACTCAGGTTTTTAGCACCTATGGTTTAAGTTCGGAAAGTGCTGTACCTGAATTTTAACCCAATATTTTTTTGATTCTTTAACAGATTAATAAAATCAATGAGTTATGATAGTGAGTTAAAACTTGGGTCTTTTATGGGTTTTGGGCTTTAACTTACTGTTATAACTTTATTTTTTGTTTTAAAATTACT # Right flank : ATATTTAAAATGATTCATTCAGAAAGGGGGCTAGAAGAATTTATGCTGAAAATTTATGGTGTGAAGCAAAATTAGTTTAAGAGAGTTCCTTTTTTAACAAATACTTAGTATCTTATCTCCACCATAAATGGGGGAAATATAATGAAAAAATTAATTTTAGCTTTAGCTATCGGGGTTATTTCTACTGCTGCAGTTGCTGAAAAACCATTAACTTTTAGTAAAGGATCGCCTGCTGTAATCGGTACCAGTCCAGATTATGTACATCATGAAAGCAGCTCTCAAATAAATAATACAAATCAATTTTCTATTGCGCTTGGCTATGCCGGATCAAAGTTAGGCTCTGATGAATTTCTCGGAACCGAATCTTTTGATGGCTTATTTGTGAATGCTGCTTATTAGGTACATCCTAAAGCCAGCCTTTGGGCAGAGTATATGTTCCAAAGTTCAGATATTGACTACAATCAATTTGCATTCGGTTATAAATACAAATTTCTGGAAAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //