Array 1 85663-86363 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CAJVBW010000013.1 Escherichia coli strain ROAR-290 / O128:H34 / fimH167 / 11649 (ST Warwick) isolate Faeces, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
     85663	    29	 100.0	    32	.............................	GCACAGATGAGGCGAACAGGTCCGCAGAAACG 	
     85724	    29	 100.0	    32	.............................	GCGATCACCGGCGGCGATCTTGTGGAGATTGA 	
     85785	    29	 100.0	    32	.............................	CACATAGCCCGGCGCGATGGCCGATACATCAT 	
     85846	    29	  96.6	    32	..............T..............	AAAGGGGCATGACAATAAAAACCCGTAACGCA 	
     85907	    29	 100.0	    32	.............................	CGCCGCGATAACATCATCAACTGCGGCGATTA 	
     85968	    29	 100.0	    32	.............................	AATCCGCCAACGGCGACAGGAGCTTGTGTCGC 	
     86029	    29	 100.0	    32	.............................	TACGCAATGTACACCGCGAATGGGTCATTTAC 	
     86090	    29	 100.0	    32	.............................	GTTGGTTTTCTTGGGATTTTTGGTCGGCACGA 	
     86151	    29	 100.0	    33	.............................	ATTTGTTTGATAGCTGCTGCGCACTGAGCCAGC	
     86213	    29	 100.0	    32	.............................	AACGCGTGAACGCCTGGCGGGAGCGCCGCTAG 	
     86274	    29	 100.0	    32	.............................	TCAGGTAAGCCAGTGTTAGGGGCAATATAGCA 	
     86335	    29	  96.6	     0	............................A	|                                	
==========	======	======	======	=============================	=================================	==================
        12	    29	  99.4	    32	GAGTTCCCCGCGCCAGCGGGGATAAACCG	                                 	       

# Left flank :   CTGGATGAACTATTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGATTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACTTTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTCTTTGTCGCCTCTGAAAAACCTCCATTTTGCCCATCCTGGACTAATCATTATCATTCTCTACAAATTCTGTGGCGTTAATTTTTCGTTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGCGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTGTAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA
# Right flank :  ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCTGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCCCCATGCCAGATAAGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATAATTCTTAAGCCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTAATTAATGCCTGTTAATTTTTTCTTTAGTATAACAGTGTATTTTTTAAGCTTGTTATTCATTGATTAAGTAATAAATCTGGAAATTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTTT

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GAGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [6,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.65,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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