Array 1 186716-186078 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCHZ01000012.1 Caminicella sporogenes strain AM 1114 contig_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 186715 30 100.0 35 .............................. AGAAGATGTATTAGGAGATTTAAGCCACTTTGCTA 186650 30 100.0 38 .............................. TAAAAATATTGCCCAAAAGAAGATAAATTTTTTCTAAT 186582 30 100.0 37 .............................. GCATGAGCGTTTATCTCATCAACAATTCGAGACATTT 186515 30 100.0 36 .............................. TAGACGATAGTCACAAAGTTATTTTTGACAACACAG 186449 30 100.0 39 .............................. AATATTATTATCCAGAAATTGAAATTGAATTTTTAGAAG 186380 30 100.0 39 .............................. TGTCCTCAAAATATACGTCTGCTGCAAGGTTGCCAAGGT 186311 30 100.0 40 .............................. CTTGCCATTTCTTTAAACCAATGAATCATAGCTCCTCTGT 186241 30 96.7 38 .................A............ ATAACCGTGCCTTTTGGAAGGTCTGGAGGCAGGAAAGC 186173 30 96.7 36 .................A............ AGTTTTGCAGGTGGGTTTACTTTTCCAAATATTTTG 186107 30 73.3 0 ............T....A......AATTTT | ========== ====== ====== ====== ============================== ======================================== ================== 10 30 96.7 38 GTTATTAGACTACCTATGAGGAATTGAAAC # Left flank : TTGTTATACTTGTATATGATGTTGAGCAGAAAAGAGTTGCTAAGGTACTTAAAACATGTAGAAAATATCTTTATTGGGTGCAAAATTCAGTTTTAGAAGGAGAAATAACAGAAGCAAATTTAATAAAGCTAAAGACAGAACTTAGAAGAATAATAAAAGAAGATAGAGATTCTGTTATAATATATAGATTTAGAACTACTAAATATTCTGCAATTGAAACATTGGGTATTAAAAAGGGTGGAGAAGAAAATATATTATAAATAAAGGAGTATGTAAAATGAAATAATTGTAAAACATGTGTTTAAAATACATATTCAAAATGTCGTCGACCTTCAGTAGTGCAAAAACCCCTGGGGATCGACGACATTTTATTTTTTATCAAAAACGTGTAAATTTCAATATATAGAAGGGTGAAATCATACTAAAATAGTAGGAATTAAGGCGAAAATCAGTTAATTGACGAAAATAAAGAAATGTGGTAGTATCAAGGTATATGATTG # Right flank : TTTATTTTTGCATAAAATTTTGTTCTGAAATCTTAAATAAATTATAAAAAAGAAAAATCAGGAGGGTTTTTATTTATGAAATCCTATAGAAAAGAATTGTGGTTTAATACTGAAACTAGAAGAGCTTTTATAAATATTACTGCTAAAATAGAAGAATGTTTAAGAGAAAGTGGTATTAAAGAAGGACTTTTATTGTGCAATGCTATGCATATAACATCAAGTGTTTTCATTAATGATGATGAACCGGGATTACATAGAGATTTTGAACGTTTTTTAGAAAAACTAGCTCCAGAGAAACCATATGAGCAATATGACCATAACGGATTTGAAGATAATGCAGATGCCCATTTAAAAAGAACAATTATGGGAAGGGAAGTTGTTGTTGCCATAACAGATGGAAAATTAGATTTTGGACCGTGGGAGCAGATTTTTTACGGAGAATTTGATGGAAAAAGACCAAAAAGAGTGCTTGTAAAGATTATTGGAGAATAAAAAACTAA # Questionable array : NO Score: 9.10 # Score Detail : 1:0, 2:3, 3:3, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATTAGACTACCTATGAGGAATTGAAAC # Alternate repeat : GTTATTAGACTACCTATAAGGAATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 1 194292-194876 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCHZ01000001.1 Caminicella sporogenes strain AM 1114 contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================================== ================== 194292 30 100.0 38 .............................. CCTCCTATCTATCTGCTGATGATACAAAGAAAATATCT 194360 30 100.0 40 .............................. AGGTATTTGTAATAATTTAAAAAGGAGTGAAAAAATGCAG 194430 30 100.0 38 .............................. AGGTATTTGTAATAATTTAAAAAGGAGTGAAAAAATGT 194498 30 100.0 35 .............................. GTAACAGTTGTTGAAAATAAAGCAATATTAAAACA 194563 30 100.0 37 .............................. ATGCATCTATCAAAGATTTAGAATTTTGCTCAGCCAT 194630 30 100.0 38 .............................. TACGGTATACCTAAGTCTTGTAAATAAGTAATTACGTC 194698 30 90.0 36 G...C........................T TTAAATTAGCAAAATCCAATAATGACCTGCTCATTA 194764 29 73.3 54 G..........T.T.....-.TT.....GA AATACAATTCTTAATTCTCAATTTTCAATTATCAATTATCAATTCTCAATTATC 194847 30 86.7 0 ........G..........A.....A...T | ========== ====== ====== ====== ============================== ====================================================== ================== 9 30 94.4 40 ATTATTAGACTACCTATAAGGAATTGAAAC # Left flank : GATTGGGAAATAATTTAAACCAAAGAGATGTTATAGCAGTTAGAAAAACAGTTTCTGAACTTGTAAAAATTATATATCCTAATGGAGAATTTAAAAAAGATGATATAGAGGAGATTCTAAAGTACGCTTTAGTTGGGAGAAGAAGGGTAAAAGAGCAATTGAAGAAAATTGGTGGTATGGAATTTTATGATGTTCATTTTTCTTACATAGATAAAGAAAGTTTTAATGAAGAATTTGTAACTGTACCAGAGCAGGGTGGAGGCAAATTAATTCCAGGTAGAATCATTTTTAAAATATTCTGAAATTTTAACTTTTTATTTTGTCGTCGACCTTCAGTAGTGTAAAAATACCTGGGGATCGACGACTTTTTGTTTTGAGCAAAAAATGTGTAAATTTCAATATATAGAGATGTTAAATCATAGTAAATTAGTATGAATTAGCATAAAAAACAATAAATTGACACAAACTAAAAGATATGATAATATCAACATGTGCAATGG # Right flank : TAAAGTATAAGTAAACATTTTAAATTTTTTAGTTGCATAAATCTAAATATTTATTTATAATTCTATTTACATACTAAAATTTTAAGTATGCTTAATTGTATAATATCGACACTAGCATGAAGCTAGTGTTTTTATGTTTGTTTAAAAATTTCAATATAAAAAATATAATATTTAAACAAAATAAAATTAAAATACACAGTGAATTGAAAATTATTTACAGCAAAAATACTGGAGGGGAATGAAATGATTTTTGTTTTTGGACATAGAAATCCTGATACAGATTCTGTTGCTTCTGCAATAGCTCTATCATATTTAAAAAATAAATTGGGATACAATACAATTCCTTGTGTACTAGGAGATTTAAATAAAGAAACGGAGTATATATTAGATAAATTTGAAATTGAAAAGCCTAAACTGCTTGATAATGTAAAAACTCAAATAAAGGATTTAGATTACGATAAAGTAGATAGTATAGGACCTTACGATACAATATTAACGGC # Questionable array : NO Score: 8.89 # Score Detail : 1:0, 2:3, 3:3, 4:0.72, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATTAGACTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [75.0-88.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 1 11365-14091 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCHZ01000016.1 Caminicella sporogenes strain AM 1114 contig_23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 11365 29 100.0 36 ............................. TATATCTATCAGCTGTATAAGTTTTTCTGTTTATTT 11430 29 100.0 37 ............................. GCAAATAGAGAAGTGCATATAGGAAGTAACTTTAATA 11496 29 100.0 36 ............................. ATTATACTCAAGAAATTCAAGAAATATCTTCTTATA 11561 29 100.0 36 ............................. GGGGTTGATTAATATGGGGCAAGTTTCTGCTTTTCG 11626 29 100.0 37 ............................. CTTGATGTTTTTGTTGTTTGTTTTTCTGTTATGCTTA 11692 29 100.0 36 ............................. TATTGGATTATCCAGCTCTGCATAAGTTCTTTTAAG 11757 29 100.0 38 ............................. TAGAAATCAATATGAGCAATCTCCCAAACAAGTCAATA 11824 29 100.0 36 ............................. TTTATAAAATGCCATTTATTATCTCCTTTTAAATTT 11889 29 100.0 37 ............................. TATCTCATTAAACCAAAGTTTATTACTTGTTTTTATC 11955 29 100.0 36 ............................. TAATATAAAGATTTTCCATCAACTCCACTAACTCTG 12020 29 100.0 37 ............................. TTTTTAAAACAAATTCTATACTCCTATCCATTTACAA 12086 29 100.0 36 ............................. AGAAAATGATAATACAGCTTATGCTTGGACCTTTTT 12151 29 100.0 36 ............................. TATTTCTGGAATTTTAATATTTCTCATTGGATGCAC 12216 29 100.0 38 ............................. TTTATTATTTTATAGTTGTTTTCATCTTCATTTGCATA 12283 29 100.0 36 ............................. TCTATTTTAATTGCTTGATTCTTACCTTTACTGCTG 12348 29 100.0 38 ............................. ATTTGCGTGGAGTGAACCCTCTGGTATGCTCTTGGATG 12415 29 100.0 37 ............................. TGTATCTCTATCATCTGCCATCTATATATTCACCTCC 12481 29 100.0 37 ............................. CTTGCAGGATTTGCTTTTATATTGCTAGGCAGCGTAG 12547 29 100.0 37 ............................. TAAAAAATAAACCTTACAAAAGTGCAGGGATAGACAT 12613 29 100.0 38 ............................. TCAACAGTAGTGGCAAGTATCTCTCTAACTGATTTGCC 12680 29 100.0 37 ............................. TATTTAAAAGATTTTAAAATATCTGCTGAAGAAAAAG 12746 29 100.0 35 ............................. TAAGATTTATTATATGTATTAAATAAAGTATAACC 12810 29 100.0 36 ............................. CTTTCATACCATCCAACCCATTCGGCAATTTGTCTT 12875 29 100.0 38 ............................. TTAACTCCTTATGTCTCTTCTGATGGCAACTTTCACAT 12942 29 100.0 37 ............................. TTTAAAAATGTAGTTATATATATCAATTATTAAATAG 13008 29 100.0 36 ............................. TTTGAATGGAACAGGCATGCAAAAGCCTATAAACAC 13073 29 100.0 38 ............................. AAAGCTCATGCTATTCAAGTTAAAGAAGATGCTTACAC 13140 29 100.0 39 ............................. TTATTAAAACCTTCATAATTCAAAAGTCTTTCATAATCA 13208 29 100.0 38 ............................. CGTAGATTAAGTTTAGACATTTATTTAAGAGACCCAGA 13275 29 100.0 37 ............................. AATTTTATTAATTTTATTAATGATAATATTCTAGTAG 13341 29 100.0 36 ............................. TATATTTATATTTTTTACATACCATCTGCCATCTCT 13406 29 100.0 36 ............................. AAATCTTATAGCCTGTAGAGCTAATTCAAAATTATC 13471 29 100.0 37 ............................. CCTACTACAGTTACTGCTTTTTTTATAGCATTTTTAT 13537 29 100.0 38 ............................. CTTACATAAAACACTATTTCTTTATAAGATTTAAGTAC 13604 29 100.0 35 ............................. TTGAAGTGTTTTGCTAACGAAGAATATTCAAGCAT 13668 29 100.0 37 ............................. GAATTAATCATTTCCCTATGTTTCGGAGCAAAATTAA 13734 29 100.0 37 ............................. TAATATCCTTTCAATCGACCTTGCAAATCCTCTACCA 13800 29 100.0 36 ............................. GAAAAAGCTTATCAAACTGCAGCTATGTCAGTAGGA 13865 29 100.0 36 ............................. TTCTTTTTGAATGACGGTTGTAATTCATATTTAGGT 13930 29 100.0 37 ............................. AGAGTAGAAATCATAAATCGAATTGCTGAAGTTCTTA 13996 29 100.0 36 ............................. TAAGTTGCTCTTCTGTTACTGGGTTTTGGGGTCCTA 14061 29 96.6 0 ............................A | TG [14086] ========== ====== ====== ====== ============================= ======================================= ================== 42 29 99.9 37 GTTTTATATTAACTATGAGAGATGTAAAT # Left flank : TATAAGCCATTAAAAGCGTGGTGGTAGAAAAAATAGGGAAATAGGTGATTATATGTTTGTTATATTGACTTATGATGTTGGTGAAAAGCGTGTAAATAAAGTTAGAAAAAAATTAAAAAAATATTTGATATGGGTTCAAAATTCAGTGTTTGAAGGTGAAATAACAAAGGGAAAACTTCAGCAATGCTTATTAGAATTGAGTAGGATAATAAATGAAAAAGAAGATTCTATTTATATATATGAAGTAAATACACCTAAATTTATTACTAAAAATATAATTGGTCAAGAAAAAAGTTTAGATGATATGTTTTTATAATTGCAGTAAACCTAATTTTTTACAAAAATATGTGAAATGAAGTAATTTTAATGTTTTGAATACAATAAATTATTAAAGTGTATTTCATTATTGGAACTTTACTGCAAATAGGTTGCTTTTTAGAAGTTATATAAGTTTACCTAATTAAGTAGTAAAGCTACATAGAAGTTTTTTGAAATAATGG # Right flank : ATCCCCCAAATTTTAATCGAAAAGTATACCACTAATGAAAAAATTAATTAGGTTCTTTGAGCCAATCCATAGTTTCTTTCATTCTATAAGAGTTATCATTCATATTAATGACATAAGATTTATGAGTTAGTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGAGAGATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 60729-60361 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCHZ01000002.1 Caminicella sporogenes strain AM 1114 contig_10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 60728 31 96.8 34 ..............................A ATCTTCAAGCTCAGCGTGTGTAAGTTTGAGGTTG 60663 31 100.0 37 ............................... GCTTTTGTAAATGAAATACCTACTCTAGATAGTGCTC 60595 31 100.0 37 ............................... CAGCAATTGGTTTGAATATATCGTCTATTAAATCAAA 60527 31 100.0 37 ............................... ATCTATTTATAAAACTATGATACGTCCCTAAAGCAGC 60459 31 100.0 36 ............................... TTTCTATGTTTAAGAAGATGTAATGAGTTCCTAAAA 60392 31 77.4 0 G....C...................TT.TTA | A [60363] ========== ====== ====== ====== =============================== ===================================== ================== 6 31 95.7 36 ATTATTAGACTACCTATAAGGAATTGAAACT # Left flank : CAACACCTTTTGGTAGAGAGATAACAGATATGCTTGTAGCAGTGAATAGACCTTATAAGAAGTCTGATTACATACCATGTATAGCTTGGGGAAGAAATGCGAGGTTTTCAGAAAAAATGAAAGTAGGAGATAGAATAAAAATTTGGGGCAGGATACAGAGTAGAGAATATCAAAAGAAAATAGATGAAGAAAATGTAGTTAAAAAGGTTGCTTATGAAGTTTCTATTTCTAAAATGAGTGCATTGCCTGAAGACAATAATAGGTTGAGTGAGTGAAAATAAAATAAAAGTTAAAAATTGTTTGAGGATGTTGTTTTAAAAAGTTGTCGACCTCCAGTAGTGCAAAAACCCCTGGGGATCGACGACTTTTTGTTTTTGATAAAGAATGTGTAAATTTCAATACTTTAAGTATTGAAAACATAGTAAAATAGTATGAATTAAGGTAAAAATCAGCAATTTGACAGAAATATAAGAATATGGTAATATCAATATGTGTAATGT # Right flank : ATATATGATAGAATTTAAACCTTCGTAAAATTAATATTTTGACGAAGGTTTTCATGTTTTTTTGTAGAAAATAAAATTATAAAATGTTGTTATAAAAAATGGCAAAATATAAGAAATTCGGAGGTAGTAATATTTTGAAAATAAAAATTCCTGAAGAAGTAGAAAAGATATTAAATACTTTATATAAAAATGGTTTTCAAGGATATGTAGTTGGAGGATGTGTAAGAGATACTCTTTTAGGTAGAATTCCTAATGATTGGGATATAGCTACAAATGCTAAACCTAATCAGATGTTAAATATTTTTAAGGATTATAAAGTAGTACCGACAGGGATAAAACATGGGACAGTAACTATTATTGTAAATAATAAACAATTTGAAGTAACTACTTACAGAATAGAAGGAAAATATTCTGATAATAGAAGACCAGATAAAGTCGAATTTACAGATGATTTAGAAAAAGATTTAAGTAGAAGAGATTTTACTATAAATGCAATGGCT # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATTAGACTACCTATAAGGAATTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.19%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //