Array 1 3981-4241 **** Predicted by CRISPRDetect 2.4 *** >NZ_AXVR01000104.1 Salinispora cortesiana strain CNY-202 K228DRAFT_scaffold00104.104_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 3981 37 100.0 38 ..................................... CCGACCGCGATCCATTCGTCACGCTGACTGTCGCTCTT 4056 37 100.0 38 ..................................... TCGAGGGCGACTGGCCGGACACGGCAACGCCGGACGGT 4131 37 100.0 37 ..................................... CGAAGATCGCGCCCGGGTGGGCGGCCAGCAGGTCGGC 4205 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 4 37 100.0 38 GCCGCAATGGAGACCGACCGCTACGGGCCGGTGAAGG # Left flank : GTGAGCCGGTCACAGTCGAAGAGTTTCCCGTCCAGGATGACGTGGGACCAACCGTCGTCGGCCACCCGCCGCAGAGCCGTGTGCAGATCCTGCGCCTGGGCCGCGAGCACAGCGATGCCCTCGTCGCGGTAGTGGTACGCGGTCGCCCGGGACACACCGAACCCCGCGGCGAGCAGGGCCACGTCCTCGGCCTTGCGGAACCAGACCAGCACCATCAACGCCTGGTAGAAGCAGGTCAACGCCCGCGTGCCGGTGCGGGTGCCACGGGCCCGGCGTTCAGCGGCAAGGAGCCGACCGAGGTGCTGCACGAGTTCCCTGGGGACATCGACCATGGCACGATAGGCAATCACGTGGAGCCCTCTCGAAGACGCGGATCTGTCGCAAGGACGTGCCTATCGATGGCTCCACGCCTATGTCCACGGCTGCCCGACTCGCCGCCTTCACCCGTGTCGCACCAATCAACCCTTATGTGTTGCTGAGATCACCTCACTGACACTGAT # Right flank : GGCGTGTCGCCCCCAGGGCCCCGGCAAAGTCGTGGATGCGTCCGGGATGAGGCATTCGGCTGAGAAGCGCCGGAGTTGCGGGCAGCAAGGCGGGCATGACCGGTTCAGATGATCATCAGGGTGTCGAAGCCTTGATCGTCCGAAGTGAGTCATGCCCGCGCTGCCATCATCGCTGATCTCGTCCCTGTCCTGCGCACCGGCTGTCACGGTGCCCGAAACCGCTGCTGGGCTGGCCACAGCGTTGGCCAATCTGCCGGACCCCCGTGCCCGCCGGGGCGTACGGCACGGGTTGGTAGTTGTGGTGACCGCGGCGGTATGTGCTGTGGTGGCTGGTTACCGCTCCTACACCGCGATCGCCGAGTGGGTCGCCGACGTCCCGGACACCACCGCGTTGGCATTAGGTATCGCCCCGCACCGGCGTCCGTCGGAGGCGATGATCCGCCGCTTGTTGCAGGCCCTGGACCCAGACCGTCTCACCACTGCCGTCAACGGCTGGCTGG # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGCAATGGAGACCGACCGCTACGGGCCGGTGAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.90,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [50.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 1 19793-19643 **** Predicted by CRISPRDetect 2.4 *** >NZ_AXVR01000063.1 Salinispora cortesiana strain CNY-202 K228DRAFT_scaffold00063.63_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 19792 28 100.0 33 ............................ GTCCAGGGGGACACGGATGCGGTTCGGTACCCC 19731 28 96.4 33 ..................A......... GTCATTAGTAGTGTTTTGGATCTTGTTTGAGTT 19670 28 78.6 0 ....................T.CT.CAT | ========== ====== ====== ====== ============================ ================================= ================== 3 28 91.7 34 GTCCTCCCCACGCACGTGGGGGTGCTCC # Left flank : GCGGGCACGTTCGAGCCGCAGATCGTCCGTAAGCGGCAGCGGCGCCTGTCGGGGGTCGACGAGGTCGTGTTGTCGCTGTATGCCAAAGGCCTCACAACCGGGGAGATCAGCGCGCACTTCGCCGAGATTTACGGGGCTTCGGTGTCGAAGGAGACGATCTCCCGGATCACCGACAAGGTGCTCGAGGAGATGGCGGATTAGTCGCACCGGCCCCTGGACGAGACTTACGCCGCGGTGTTCATCGACGCCATCGTGGTCAAGGTCCGTGGCGGTCGCG # Right flank : CCTCGACGCCGTCCGCGCCGGTTGCACCGGCGTCGGCCTGGCCGTTTCTGAAAGTCCTGGCCATACAGTAAGCGGCGTTGTGGTTGGCGTGTTGTCGTGCTGGGAGGGGTGTGGGCGTGGTGAGGACAGTTCAGGTTCGTACGTATCTGGTGCGGGTGGGTCGGTTGGATGAGTGGGTTGATGCGTGGCGGAGGTTGATTGTTCCGTTGCGGCGGGAGTTCGGTTTTGAGGTGCACGGTTCGTGGGTGGACCGGGACGCGAACGCTCATATTTGGGTGCTTTCCTACGAGGGAGGTCGGTCGTTCGCGGAGGCCAACGCGGACTATTGGGCGTCGCCGCAGCGGGAGCGGTTGGGGGTGAATCCGGCGGAGTTCCTGGTGGGTGAGCAGGTCCGTGAGGTGGAGCAGGTCTTGTAGCTACTCTGCTGCCGGTAGGCGGTGGGCGGCGCGCTCGTCGGGAGTGAGGGTTCGGACGACTCGGTGGCGTGCCGCGTGCAGGAG # Questionable array : NO Score: 5.26 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCACGCACGTGGGGGTGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCACGCACGTGGGGTGCTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [26.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //