Array 1 2107310-2107143 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP049303.1 Liquorilactobacillus hordei DSM 19519 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =============================== ================== 2107309 35 100.0 31 ................................... CAAGCGATGTGCCAGGAGCTGCATTCGGCTG 2107243 35 100.0 31 ................................... CTTAGAAACGGAGAGATTAAAGGCGAAGTTA 2107177 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== =============================== ================== 3 35 100.0 32 GTTTTAGAAAGACGTTAAACCAATAATGTTAGATC # Left flank : GTATTTGCCGGCTATTTTTAAAAAGATGTTCGCAGATATGCCAGATGAACAAAGAGGTAGAATTCATCTGGCAACTCAAAATCTGGATAACGCTATTCAAGAGGGTCTGTATTTAGCAGACTTTCCAATTAAGGTTACTTATGATTTTGATTTGAGAAAATCGTTAAAATTTGCGCATACACATTTTGATGATGATATTTTGAAACAACCATATGATATAATAAAAACAGTTCTTAAAATTCATCAAATATGTGAAATGAAATCATGTTTAACTATTTGTAATGTAGCTCATTACATAACAATTGAACAAATGGAAGATTTAGCAGCATTCCTACAAGACGTGATGTTGCCACTTGCTCTCATTGAATTCACAGATAATAAAGCAAATGAATTTTATAAAAATTGCAATTTTTACTATATTGACAAGGATTATGTCGATTGGTATGAATAATATTATTGTGTTGATACTTTCTTTGTGAGATCGTGATTAGAAAATAACG # Right flank : TAGGCAGCTAGTGAAAGCTGCTGGTTTTTTATGATATTCAAGTGCTTGGTTAACTGTAGCTACTAATCAGCTATCCTCCTATTTATATGCGAGCATCCTATGAATCTTTGGTTTATGTACTGAACTAAGATATACCCAAGTTTCATATTGAAGCTTAAGATAAGTGATATCAGCCCGCCAAGCACTAGTTTTTGGTTTGTTTTTAATCAGATTGGGGTGTGGTTCCCTATTTTTAATTTTTTAAATTCTTTAGGAATAACTTCAGTTCCATTATAATTTCAGCAATTTTGCATCTTTAATCTTGATGCAGGAGGTAATTCATAATTCTTCTGAAAGAGAACGAAACGAACTGATTTTTTTCCGTATTTTGCATCTTAATAACATAACACTCGCTTTAAAAACGCTGGTATATCGTTTCATATATAAAAACTCCTATGTTAGTTATTTAATTAGGTCATAAATGTCTAAGTATTTATATACCAAATATTAGGATAGAAATA # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAAGACGTTAAACCAATAATGTTAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 2 2156144-2154388 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP049303.1 Liquorilactobacillus hordei DSM 19519 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 2156143 36 100.0 30 .................................... AATCTCTTTACTATTGTTGTTTGTTTTTTC 2156077 36 100.0 30 .................................... AACTTATCCCGATATAGAACTACTGCATAC 2156011 36 100.0 30 .................................... TTCAGGTAAAGATTTCCATGTGTGAGCATT 2155945 36 100.0 31 .................................... TTGTGGCAAACATTCCTGCTCTGTTGACTGG 2155878 36 100.0 30 .................................... TAATTTCATCCTTTACATGACTAATGCCAT 2155812 36 100.0 30 .................................... AAAGTCAGCTGATTAACATTCACATCTGTT 2155746 36 100.0 30 .................................... GGCGCTATGATTATTACACCACCGACTGTC 2155680 36 100.0 30 .................................... ATAGTTAAAAAGCTTAAATCTCCATGCTCA 2155614 36 100.0 30 .................................... CAAAATCTTTATATAGCTCGTTCTGCTTTG 2155548 36 100.0 30 .................................... AAAAGATTGGTATCCCCACTTATCATAATC 2155482 36 100.0 31 .................................... TTACCTTTTAATTCAATATATCCTGTACTTT 2155415 36 100.0 30 .................................... AGACTCAGACTCAGACTCAGATACAGAATC 2155349 36 100.0 30 .................................... ATTCTCACTAGAAAGTGAGGTGATAAATAT 2155283 36 100.0 30 .................................... GCGTTAGTATCACTAGCAATCAGCTCCTTG 2155217 36 100.0 30 .................................... GTTTCTCATCAAATACGAGTTCGATACCCT 2155151 36 100.0 30 .................................... CTAACCCAGCCGATAATGCAACAGTCACAT 2155085 36 100.0 31 .................................... TCACTGGTATTCAAAATGTTATTAACTCAAT 2155018 36 100.0 30 .................................... AGCAACTAGTGATGGTTATGCGGTGAATAT 2154952 36 100.0 30 .................................... ACAACACTAAATCTCCATAAACCTGTGGTT 2154886 36 100.0 30 .................................... TGTATCCAAAACGGATACGCAGGTTAGGTT 2154820 36 100.0 30 .................................... AAAGAGAAACTGATTTTTTCGCACCGGTAT 2154754 36 100.0 30 .................................... TTTTTCATTAACATAAGAATACACATAATA 2154688 36 100.0 30 .................................... ATGTATACTTATTATATTGAGTATGCTATA 2154622 36 100.0 30 .................................... TTTTGATGCTAGTCAACTAGTTGCGCAGGC 2154556 36 100.0 31 .................................... TGTTATATCCTAATCAGAAACTAAAGGTTAG 2154489 36 100.0 30 .................................... ACAATTTTAGTGTGCATAGAGTGCACATGA 2154423 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 27 36 100.0 30 GTTTTTGTACTCTCAACATTTTCCTATCAGTAAAAC # Left flank : AGCAAGTTTCTTAACAGCTGAAAAGATTCAGGTGTTGATAGATGGACTAGTCCAGTTGGCAGAAAAAACAGGGCTAGTTCATATCTTTGTAATTAGTCAGATACCATTGGGGATAAATTATCGGCCAAACGATATTCCAAATACGATTATTTTGGCAGATGAATTGTGCCAGATGCCTGATTTTGATAGCTTTAGAAATAGTATTGAAAATCATTATCCAGGAGATTTGAATATAACTGATGATCAGCTTTGTCAAAATTTTTATGAAATAGTCGCAGACATTGGTGATAATAATATTCTTACTGGAAAATCTTATCCAGATATTGTATTGTTAAAAGTGTTAGATGAAATTTTAGGATTCAAGGTACCTAATTTTACTTACAACCTCAAAGAGCTTACAAATACAGAACGTGCCTTTCTTGATTCTTGAAGATTGACGAATTTTTAGGAATAGAAGACGTAATTTTACCGGCCAAAAAAATAATAATTTTTAATTTGAG # Right flank : TGCTCCTATGTCAATAAATGGCACATCTTTTTCTAAACACTCGTTCTAATTCTGTCGGAATTAAACCAACTGATGTAATTTGAGGTTCGGATTACCAAGTCCTCAAAATTGGAAAAAGTTGTTTGAAAGGCAAACTCTCTCTTCAACAATGAGTGAAAAGCTTCAATTGGCCCATTATCATAAGGATAACCTTGTTTTGAGTATGAGTGGCTAATCTGATGCCGTTCAAGTAAAGTTTCAACTTCGTTGCTGGTGTACTGTGAACCCATGTCAGAGTGAAAATATTGTGGCTTTTGATGACATTCAAGCGCCTGATTAATCGTTTCTACAACTAACGGCGCCTCCATCTGACGACCAATCTTGAAAGCAAGAACTTGATGAACCTTTGGTTCGTAAATAGAACTGAGATAAACCCAGGTTCCTGGACGTAATTCCAAATAAGTAATGTCAGCACGCCATATCCTTGCATTGGGCTGGTGCTTGATTAAATTGGGGCGTTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAACATTTTCCTATCAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [63.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //