Array 1 109748-110129 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABCJR010000012.1 Vibrio breoganii strain BS_02 NODE_12_length_112964_cov_55.111577, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 109748 36 100.0 33 .................................... TTTGGAAAACGTTGCTTTCATCCCACCCTTTAA 109817 36 100.0 34 .................................... GAAAGCCACCATTCCACGCTGCGCCGCTATCATT 109887 36 100.0 33 .................................... ATTATTACCGCTGTTTTGAACTCAACAACAGTG 109956 36 94.4 32 ............G...................T... TGCTGCGCTGCATTTGGGGCATGGCGGCTAAT 110024 36 88.9 34 .......AC..A....................T... GAAAGCAGGAATGTCGTAATTAACCCCTGTAGCT 110094 36 86.1 0 .......AC..A....................T..T | ========== ====== ====== ====== ==================================== ================================== ================== 6 36 94.9 33 GTCTGAACTTCGCCCTGTTCTTAAAGGGATTAAGAC # Left flank : GGATCTTGTGTTACGACATTTGCGATGCAAAGCGCTTGCAAAAAATGCATCGCCTCGCTTGTGGATACGGAGTACCTATGCAGTACTCGGTATTCCTAATCCAACTAAGCCAAGCACAACTAACACAATTGGCAAAGGATATCGAAAACACCATAGACAATAAGGAGGACAACGTGAAGATTTACCCGATCAAACATATACCCAAAGAATATCTTTCCGATATTGGTGTGACCGTGACTACAGATGGGCTTATTCTGACCTAAACAACCAAGGCACCATTATATTCAATGTGATATTAAGAGCAGGTTAAGTAGGCAAGGTTCACAAATTCAGTGAACTACCGCTCAAAAATCATTAAAAACAGTAGCTTAAAGCAGGATCATTGAGTTAAGCTACCCCACGGTCAAGCAACGAAATAATCGTCAAGTTTATGAATTTGCAACTCTTCGATAAGCCTAGTTTTAATCTATTGATTTGTAAGGTTTTTTAGGGGGCTTGCT # Right flank : TTTTATGACCCTAGGCACTAGGACCTAGAACCTAGGTTCCCCCCTTCTCAATCAAAGAATAAACCCATTAAGATAAGGCAATGCACTCCCTATCGTTATGCCAAAGACCAAGCCCCATATCACGCGAGTATTCTTCTCACCGTACATGTGTTGAATTTGGCTTTGAACTGCCTTGAGTTGGTGGTGGTGTTCGCACTTTTGCTGTTGCATCTCCTCTATCAGCCTGTCGCGTGCTTTTAGCTCATATCGCAACGCCGAAATAGAACTGCTACAGTGACACTCTTTGGTGTACTGCTTTATGATTTGGAGTTGCGCATAACTTTCACAACCCTTGCCTGCTAGTACCTTATCTTGGGCAATCTTAGTCAACTTAAACAATTCATCGCTAGGCATTGAACCTTTATCCGGATGAAGCCTATTTGCCAATAGCCTGTAGCTTCTTTTTATCTCCAGTTTTGTTGATGCATCGCTTGTGCCTAGAATTTGATGAAAAGTGCCCA # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAACTTCGCCCTGTTCTTAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 2 112155-112537 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABCJR010000012.1 Vibrio breoganii strain BS_02 NODE_12_length_112964_cov_55.111577, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 112155 36 100.0 34 .................................... CTATGGATGCGATGAGGACTCGTCCGGTTTTTTC 112225 36 100.0 33 .................................... ACGAATCACGCCGAACACCCACACTCATCCACA 112294 36 100.0 33 .................................... GTCATAGTGAGAAGACATTGACAGGTAAAAACC 112363 36 100.0 34 .................................... ACTCATCGGCTGACCTTTTCGCATTCGCCTCTCA 112433 36 100.0 33 .................................... CAAAAGCAAAGAATGCGCCACATTCGGTCATTA 112502 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ================================== ================== 6 36 99.5 34 GTCTGAAACTCGCCCTGTTCTTAAAGGGATTAAGAC # Left flank : TTGAACTAGGACGACTCGATTTATACGACCAAACTATTAGTTCAGAGAAAGCTGTGGAGCTTTATTTGATGATGTTTAAGGCGCTCTTGATTCTCTTTGGGTTTTACCTATTTTCAATAGGCCTTGAACGTTTGGCGATTCGCTATGCCCTCTATAAATACAATCAAGTGAGGCAGGAAAATGAAAATCTCACCAATTAAACCTATGCCTAATCTGTCCGATATTGATGTGACCGTGACCACAGCTGGGCTTATTTTAACCTAAGGAATAAGCCCCCAAGGCACCAAAATATTCAATGTGATAATCAACCTTAGGCAAGGTTCACAATTTCAGTGAAGTACGGCTCAAAAATCATTAAAAACAGTAGCTTAAAGAAGGATTATTGAGTTAAGATACCCCACGGTCAAGCAACGAAATAATCGTCAAGTTTATGAATTTGCAATTCTCCGATAAGCCTAATTTTAATTTATTGATTTGTAAGGTTTTTTAGGGGGTTTGCT # Right flank : CAATCACCTTTAATACCCACAACAAGCGAACGTCTGAAACTCGCTCTGTTTTTATCCACTCCTCTATTCTGACCTTATGGCTTATGGCTTATGGCTACAAATGTGATCTCCCCCTAAGTCAAAAATTAAAAAGTTATCAGCATAAAAAAAGCCGACTTTTAAAGTCGGCCTTAGTGGCAAGCACTTGGTTAATTTACCTATACCTAAAGGTAATATTGGATGATTTTATCTTCAGCCCCTTCGGTGTTTTTCAAGTTAGTTGGCACTGGTTGCTTACTATTTATGCAACCTCTCTTTGCTCTTTTTCCGGATTTAAGTCGACCCGTTCTATCGGTGCGCAGCAACGTACTTCTCCAGACCAACGGTTAGGGTTTTCCCGTCTCTTTTTCTCTAACACTCGCTGTCTTTGAGCTAGGATTTCTACGTC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAACTCGCCCTGTTCTTAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //